prot_L-elsbetiae_contig2037.6127.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2037.6127.1
Unique Nameprot_L-elsbetiae_contig2037.6127.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length205
Homology
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BLAST of mRNA_L-elsbetiae_contig2037.6127.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 2.870e-23
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0 
Query:    1 MLLRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRKLIEDEDDLPENRPLKPTLVR 70
            ++LR+ACDACHRMKRKCDG  PC RC RRSR C YSYKQKSGPPKGSKRKLI  ++DL ENR  +P L++
Sbjct:  205 VVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQSRPKLIQ 274
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BLAST of mRNA_L-elsbetiae_contig2037.6127.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 3.030e-23
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0 
Query:    1 MLLRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRKLIEDEDDLPENRPLKPTLVR 70
            ++LR+ACDACHRMKRKCDG  PC RC RRSR C YSYKQKSGPPKGSKRKLI  ++DL ENR  +P L++
Sbjct:  181 VVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQSRPKLIQ 250
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BLAST of mRNA_L-elsbetiae_contig2037.6127.1 vs. uniprot
Match: A0A5N6U4X0_9EURO (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Aspergillus avenaceus TaxID=36643 RepID=A0A5N6U4X0_9EURO)

HSP 1 Score: 58.9 bits (141), Expect = 8.760e-7
Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 0 
Query:    3 LRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRK 50
            LR AC+ CHRMK +C G  PC+RC     DC YS+  K G PKGS+ K
Sbjct:   27 LRRACNLCHRMKLRCSGTSPCSRCHDAGSDCVYSFAAKIGKPKGSRNK 74
[Close]
BLAST of mRNA_L-elsbetiae_contig2037.6127.1 vs. uniprot
Match: D7G645_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G645_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 2.900e-5
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0 
Query:    3 LRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRKLIEDEDD 57
            LR  CDAC   K KCDG HPC RC+RR  +C Y  K++ GP    KR+ +   DD
Sbjct:   53 LRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGP----KRRKLSSRDD 103
[Close]
BLAST of mRNA_L-elsbetiae_contig2037.6127.1 vs. uniprot
Match: A0A6H5J8L2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L2_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 3.080e-5
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0 
Query:    3 LRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRKLIEDEDD 57
            LR  CDAC   K KCDG HPC RC+RR  +C Y  K++ GP    KR+ +   DD
Sbjct:  179 LRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGP----KRRKLSSRDD 229
[Close]
BLAST of mRNA_L-elsbetiae_contig2037.6127.1 vs. uniprot
Match: D7G644_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G644_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 6.220e-5
Identity = 26/54 (48.15%), Postives = 32/54 (59.26%), Query Frame = 0 
Query:    4 RAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRKLIEDEDD 57
            R  CDAC   K KCDG HPC RC+RR  +C Y  K++ GP    KR+ +   DD
Sbjct:   56 RTTCDACTLGKIKCDGGHPCRRCQRRGSECVYREKKRCGP----KRRKLSSRDD 105
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2037.6127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LM00_ECTSI2.870e-2371.43Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A6H5JM19_9PHAE3.030e-2371.43Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A5N6U4X0_9EURO8.760e-754.17Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G645_ECTSI2.900e-549.09Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5J8L2_9PHAE3.080e-549.09Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G644_ECTSI6.220e-548.15Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 1..44
e-value: 1.5E-7
score: 41.0
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 6..40
e-value: 9.6E-9
score: 35.2
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 6..33
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 6..35
score: 10.667
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 2..58
e-value: 5.0E-11
score: 44.4
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 4..41
NoneNo IPR availablePANTHERPTHR47338FAMILY NOT NAMEDcoord: 6..149
NoneNo IPR availablePANTHERPTHR47338:SF5coord: 6..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2037contigL-elsbetiae_contig2037:12052..12666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2037.6127.1mRNA_L-elsbetiae_contig2037.6127.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2037 12033..12666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2037.6127.1 ID=prot_L-elsbetiae_contig2037.6127.1|Name=mRNA_L-elsbetiae_contig2037.6127.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp
MLLRAACDACHRMKRKCDGKHPCTRCERRSRDCFYSYKQKSGPPKGSKRK
LIEDEDDLPENRPLKPTLVRHADTVGSWTPGGRSGSNGNPNSNPNSNEVA
EGRVGDDYGNHNPSSSSALIEAAQQYSQVGAQQFSQAPTQQSVPAPAQHS
VPVSAHGFGQVSSPLVGPSPEARAAAAAAVAASRMNALAPAPPPLTAAGL
RPSYM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf