prot_L-elsbetiae_contig2033.6115.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2033.6115.1
Unique Nameprot_L-elsbetiae_contig2033.6115.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length211
Homology
BLAST of mRNA_L-elsbetiae_contig2033.6115.1 vs. uniprot
Match: D8LU89_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU89_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 1.360e-95
Identity = 161/240 (67.08%), Postives = 176/240 (73.33%), Query Frame = 0
Query:    1 MDWSWSSEFGSKHDASRG-EVYMSLDVLNEVWTAEMAFLRDMYLLDADFFRFVWGLLQQREAAGPATATLAVHAGTKVAVELVAHARASTCVSPWCKRLSELAEAHPHAADNVLALLATGRRSGSQAGYLRELLVSCPRASTRLAFEHLAVAAVAASSNPSKNGGGQGPTADWEGEPQEE----------------------------VGRQTAALSRVLLDLLRDESRGAARGDSPGGL 211
            MDWSW++EFG++HD S+G EVYMSLDVLN+VWTAEM+FLRDMYLLDADFFRFVWGLLQQ EAAGPATATLA HAGTKVAVE+VAHARAS+CV+PWCKRLS+LA AH HAADNVLALLA GRR+GS AGYLRELLVSCPRASTRLAFEHLAV AV ASSN                                                 V +QT+ALSRVLLDLL DES G+ARG S GGL
Sbjct:    4 MDWSWNAEFGARHDVSQGREVYMSLDVLNQVWTAEMSFLRDMYLLDADFFRFVWGLLQQPEAAGPATATLAAHAGTKVAVEMVAHARASSCVAPWCKRLSQLARAHQHAADNVLALLAVGRRNGSNAGYLRELLVSCPRASTRLAFEHLAVDAVEASSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVAVAPASVAVVDQQTSALSRVLLDLLADESYGSARGGSLGGL 243          
BLAST of mRNA_L-elsbetiae_contig2033.6115.1 vs. uniprot
Match: A0A6H5KTV6_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV6_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 3.440e-84
Identity = 161/240 (67.08%), Postives = 173/240 (72.08%), Query Frame = 0
Query:    1 MDWSWSSEFGSKHDASRG-EVYMSLDVLNEVWTAEMAFLRDMYLLDADFFRFVWGLLQQREAAGPATATLAVHAGTKVAVELVAHARASTCVSPWCKRLSELAEAHPHAADNVLALLATGRRSGSQAGYLRELLVSCPRASTRLAFEHLAVAAVAASSNPSKNGGGQGPTADWEGEPQEE----------------------------VGRQTAALSRVLLDLLRDESRGAARGDSPGGL 211
            MDWS SSEFG++HD S+G EVYMSLDVLN+VWTAEM+FLRDMYLLDADFFRFVWGLLQQ EAAGPATATLA HAGTKVAVE+VAHARAS+CV+PWCKRLS+LA AH HAADNVLALLA GRR+GS AGYLRELLVSCPR STRLAFEHLAV AV ASSN                                                 V +QT ALSRVLLDLL DES G+ARG S GGL
Sbjct: 2401 MDWSLSSEFGARHDVSQGREVYMSLDVLNQVWTAEMSFLRDMYLLDADFFRFVWGLLQQPEAAGPATATLAAHAGTKVAVEMVAHARASSCVAPWCKRLSQLARAHQHAADNVLALLAVGRRNGSNAGYLRELLVSCPRTSTRLAFEHLAVDAVEASSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVAPASVAVVDQQTLALSRVLLDLLADESYGSARGASLGGL 2640          
BLAST of mRNA_L-elsbetiae_contig2033.6115.1 vs. uniprot
Match: A0A7S2RJQ3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJQ3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 4.440e-8
Identity = 55/180 (30.56%), Postives = 74/180 (41.11%), Query Frame = 0
Query:   22 MSLDVLNEVWTAEMAFLRDMYLLDADFFRFVWGLLQ---------------------QREAAGPATATL-----AVHAGTKVAVELVAHARASTCVSPWCKRLSELAE---------------------AHPHAADNVLALLATGRRSGSQAGYLRELLVSCPRASTRLAFEHLAVAAVA 154
            M+  V   VW   +AFL D +  + D FRF+W ++                       REA  P    L     A   G +  V++VAHARA +CV  WC +L  LA+                     A PH  D  +A L   R S    G+L ++LV CP  S++ AF HL    VA
Sbjct:  174 MTPAVQRAVWDESLAFLFDRHTFNVDHFRFLWHIVDCTIPAASPPRAGLRDKELVGSPREAPEPHHMELGACARATEVGLQFLVDVVAHARAKSCVPSWCGQLLSLAQQSEDVAKVALRLLTGEDAVARAFPHEGDTRVAPLDGARESR---GWLAQMLVLCPHDSSKDAFIHLITTLVA 350          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2033.6115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LU89_ECTSI1.360e-9567.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KTV6_9PHAE3.440e-8467.08USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2RJQ3_9STRA4.440e-830.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2033contigL-elsbetiae_contig2033:12071..14606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2033.6115.1mRNA_L-elsbetiae_contig2033.6115.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2033 12068..14606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2033.6115.1 ID=prot_L-elsbetiae_contig2033.6115.1|Name=mRNA_L-elsbetiae_contig2033.6115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
MDWSWSSEFGSKHDASRGEVYMSLDVLNEVWTAEMAFLRDMYLLDADFFR
FVWGLLQQREAAGPATATLAVHAGTKVAVELVAHARASTCVSPWCKRLSE
LAEAHPHAADNVLALLATGRRSGSQAGYLRELLVSCPRASTRLAFEHLAV
AAVAASSNPSKNGGGQGPTADWEGEPQEEVGRQTAALSRVLLDLLRDESR
GAARGDSPGGL
back to top