prot_L-elsbetiae_contig2020.6075.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2020.6075.1
Unique Nameprot_L-elsbetiae_contig2020.6075.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length86
Homology
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BLAST of mRNA_L-elsbetiae_contig2020.6075.1 vs. uniprot
Match: D7G1Z1_ECTSI (C2H2 and CCCH zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z1_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.720e-28
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0 
Query:   10 NTGGLYLGPVRRPLNADCEFFDAGNINRALLCKINVFAIISGGGDAMDFDDHQRSYGCMFHNCSSTFSSLRR 81
            +TGGLYLGPV RPL++D EFFD GN NRALLCK+NVFAI+S G DAMD  + Q  + CMF +C++TFSSL+R
Sbjct:    8 STGGLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSEGADAMDLHEDQHQFECMFQDCTATFSSLKR 79
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2020.6075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1Z1_ECTSI1.720e-2866.67C2H2 and CCCH zinc finger protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2020contigL-elsbetiae_contig2020:21680..21937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2020.6075.1mRNA_L-elsbetiae_contig2020.6075.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2020 21680..21937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2020.6075.1 ID=prot_L-elsbetiae_contig2020.6075.1|Name=mRNA_L-elsbetiae_contig2020.6075.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp
MKSDNETPTNTGGLYLGPVRRPLNADCEFFDAGNINRALLCKINVFAIIS
GGGDAMDFDDHQRSYGCMFHNCSSTFSSLRRVSLD*
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