prot_L-elsbetiae_contig2014.6058.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2014.6058.1
Unique Nameprot_L-elsbetiae_contig2014.6058.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length595
Homology
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 492 bits (1267), Expect = 1.480e-166
Identity = 300/394 (76.14%), Postives = 314/394 (79.70%), Query Frame = 0
Query:  208 KDPSMMRLSRRIARSGMASRREAERLVEAGVVTVNGTPVQTPALNVGPRDIVKVKVRLGSLVPFRIGRCC----RGRALERPEDHTPKLWMVHKTRNELVTRHDPEGRATVFDRLAKLKMPDTLMPVGRLDYNTEGLLLLTNDGDLARLMELPSSDIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVARVEIPKAFLRRLEEGTAGGSLGAGXXXXXXXRRMXXXXXXXXXK--RRDAEAGGM-----SPPRQGDSSLRGEGLDSRRSGDGRGAYAGXXXXXXXXXXSRSVGGTWGGARGKKGARIRKGVGAPMSRGDNSARGRAQQ 590
            KDPS+MRLSRRIARSG+ASRREAER+VEAGVV VNG  VQTPALNVGPRDIVKV V  G       G  C    +G+ LERPE HTPKLWMVHK RNELVTRHDPEGR TVFDRL KLK+PDTLMPVGRLDYNTEGLLLLTNDGDLAR MELPSS+IVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVA VEIPKAF+RRLE+G  GGS G  XXXXXXX   XXXXXXXXX   RR+ EAGGM     S P  G S+  G G D+   GD  G+  G           R  G +WG    K G RIRKGVGAPMSRGDNSAR  AQQ
Sbjct:  108 KDPSVMRLSRRIARSGIASRREAERMVEAGVVMVNGATVQTPALNVGPRDIVKVNV--GLFQQPGNGTDCFTFVQGKVLERPESHTPKLWMVHKMRNELVTRHDPEGRPTVFDRLTKLKLPDTLMPVGRLDYNTEGLLLLTNDGDLARKMELPSSNIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAAVEIPKAFMRRLEDG--GGSPGGAXXXXXXXXXXXXXXXXXXXNGMRREMEAGGMKVSEVSSPGTGLSNTVGGGRDT---GDRAGSSGGRHWGGGF----RGAGRSWGE---KGGPRIRKGVGAPMSRGDNSARPTAQQ 487          
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Match: A0A6H5J9J6_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J6_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 1.400e-77
Identity = 138/195 (70.77%), Postives = 152/195 (77.95%), Query Frame = 0
Query:  197 GHVDEVLRSQIKDPSMMRLSRRIARSGMASRREAERLVEAGVVTVNGTPVQTPALNVGPRDIVKVKV----RLGSLVPFR----------------IGRCCRGRALERPEDHTPKLWMVHKTRNELVTRHDPEGRATVFDRLAKLKMPDTLMPVGRLDYNTEGLLLLTNDGDLARLMELPSSDIVRTYSVRVYGN 371
            G+ + +   +IKDPS+MRLSRRIARSG+ASRREAER+VEAGVV VNG  VQTPALNVGPRDIVKV V    +LG+   +R                +     G+ LERPE HTPKLWMVHK RNELVTR DPEGR TVFDRLAKLK+PDTLMPVGRLDYNTEGLLLLTNDGDLAR MELPSS+IVRTYSVRVYGN
Sbjct:   97 GYGEALPPPKIKDPSVMRLSRRIARSGIASRREAERMVEAGVVMVNGATVQTPALNVGPRDIVKVNVGLFLQLGNGADYRFFVQVDFDALLLCLSYLSDTALGKVLERPESHTPKLWMVHKMRNELVTRDDPEGRPTVFDRLAKLKLPDTLMPVGRLDYNTEGLLLLTNDGDLARKMELPSSNIVRTYSVRVYGN 291          
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Match: A0A835ZDT5_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT5_9STRA)

HSP 1 Score: 232 bits (592), Expect = 4.920e-66
Identity = 134/304 (44.08%), Postives = 180/304 (59.21%), Query Frame = 0
Query:  185 EEHSASGVDESEGHVDEVLRSQI--KDPSMMRLSRRIARSGMASRREAERLVEAGVVT--------------VNGTPVQTPALNVGPRDIVKV--KVRLGSLVPFRIGRCCRGRALERPEDHTPKLWMVHKTRNELVTRHDPEGRATVFDRLAKLKMPDTLMPVGRLDYNTEGLLLLTNDGDLARLMELPSSDIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVARVEIPKAFLRRL 470
            EE   +G +  E H +   + Q   K   +MRL++RIARSG +SRREAERL++ G V               +NG    +PA+NV   D V+V  K     + P R+                   W VHK R ELV R D +GR  V +R+  + + D L PVGRLD+ TEGLLLLT+DGDLAR +E P+  + R Y VRV+G++T EKLR M+ GC I+GV YKGM V ++ G     E  N WL + C EGKN QIR++C++L LTVNRL RT +GPF LGK+ +GGVA V + + FL+++
Sbjct:   10 EEGVVNGGNSGEEHAELQPQRQRTRKQHEVMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARV-------------------WAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRG-----EKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQV 289          
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Match: A0A6H5J790_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J790_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 2.270e-60
Identity = 138/216 (63.89%), Postives = 145/216 (67.13%), Query Frame = 0
Query:  380 MRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVARVEIPKAFLRRLEEGTAGGSLGAGXXXXXXXRRMXXXXXXXXXKRRDAEAGGM-----SPPRQGDSSLRGEGLDSRRSGDGRGAYAGXXXXXXXXXXSRSVGGTWGGARGKKGARIRKGVGAPMSRGDNSARGRAQQ 590
            MRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGK      ICKYLCLTVNRLART YGPFSLGKVRAGGVA VEIPKAF+RRLE+G  GGS G  XXXXX               RR+ EAG M     S P  G+SS  G G D+    D R   +G           R  G +WGG   K G RIRKGVGAPMSRGDNSAR  AQQ
Sbjct:    1 MRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGK------ICKYLCLTVNRLARTGYGPFSLGKVRAGGVAAVEIPKAFMRRLEDG--GGSPGGAXXXXXGTSGRRLGPGPGNGMRRELEAGRMRVSEVSSPGGGNSSTVGGGRDT----DDRAISSGGRHWGDGF---RGAGRSWGG---KGGPRIRKGVGAPMSRGDNSARPTAQQ 198          
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Match: A3VHQ4_9RHOB (Pseudouridine synthase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A3VHQ4_9RHOB)

HSP 1 Score: 206 bits (523), Expect = 4.150e-58
Identity = 121/254 (47.64%), Postives = 163/254 (64.17%), Query Frame = 0
Query:  208 KDPSMMRLSRRIARSGMASRREAERLVEAGVVTVNGTPVQTPALNVGPRDIVKVKVRLGSLVPFRIGRCCRGRALERPEDHTPKLWMVHKTRNELVTRHDPEGRATVFDRLAKLKMPDTLMPVGRLDYNTEGLLLLTNDGDLARLMELPSSDIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVARVE 461
            K P   R+++ ++R+G+ASRREAER++EAG V+VNG  + +PALNV PRD + V    G+LV             E+PE   P+LW+ HK    + T  D +GR TVFD+L +  MP  +M VGRLD N+EGLLLLTNDG + R +ELPS+  VR Y VRV G   E  L  +R G T+DG  ++GM V ++      ++G NAWLTI   EGKNR+IR+  + + LTVNRL R  YGPF LG+++AG V  V+
Sbjct:   31 KTPPGDRIAKVLSRAGVASRREAERMIEAGRVSVNGKVIDSPALNVTPRDKITVD---GTLV-------------EKPE--APRLWLYHKPTGLVTTERDEKGRETVFDKLPE-DMP-RVMSVGRLDLNSEGLLLLTNDGGIKRKLELPSTGWVRKYRVRVNGKPEEAVLEKLRKGITVDGEAFQGMSVTLDR-----QQGANAWLTIGLREGKNREIRRAMEAVGLTVNRLIRISYGPFRLGELKAGAVEEVK 259          
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Match: A0A192ILM9_9HYPH (Pseudouridine synthase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192ILM9_9HYPH)

HSP 1 Score: 204 bits (518), Expect = 6.460e-58
Identity = 117/260 (45.00%), Postives = 163/260 (62.69%), Query Frame = 0
Query:  214 RLSRRIARSGMASRREAERLVEAGVVTVNGTPVQTPALNVGPRDIVKVKVRLGSLVPFRIGRCCRGRALERPEDHTPKLWMVHKTRNELVTRHDPEGRATVFDRLAKLKMPDTLMPVGRLDYNTEGLLLLTNDGDLARLMELPSSDIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVARVEIPKAFLRRLEEG 473
            R+++R+AR+G+ASRREAER++EAG V +NG  +++PA+NVGP D ++V                 G+A+  P+  + +LW  HK    L T  D  GRAT++D L K ++P  ++PVGRLD N+EGLLLLTNDG L R +ELP +   RTY VR YG +  E L  ++ G T+DG ++  + V  E  GG     RN WLT+   EG+NR++R+    + LTVNRL RT YGPF LG++ +G V  VE+P   LRR   G
Sbjct:    6 RIAKRLARAGIASRREAERMIEAGRVKLNGQVLKSPAVNVGPDDTIEVD----------------GKAVGEPD--SIRLWRYHKPAGLLTTARDDLGRATIYDHLPK-RLP-RVVPVGRLDLNSEGLLLLTNDGGLKRGLELPGNAWTRTYRVRAYGAVKPELLEDLKRGITVDGEKFGAIEVTAERSGG-----RNTWLTVSLNEGRNREVRRALDAVGLTVNRLIRTAYGPFRLGELGSGQV--VEVPGNELRRAARG 238          
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Match: UPI001F20AC47 (rRNA pseudouridine synthase n=2 Tax=unclassified Octadecabacter TaxID=196158 RepID=UPI001F20AC47)

HSP 1 Score: 204 bits (518), Expect = 1.970e-57
Identity = 118/254 (46.46%), Postives = 161/254 (63.39%), Query Frame = 0
Query:  208 KDPSMMRLSRRIARSGMASRREAERLVEAGVVTVNGTPVQTPALNVGPRDIVKVKVRLGSLVPFRIGRCCRGRALERPEDHTPKLWMVHKTRNELVTRHDPEGRATVFDRLAKLKMPDTLMPVGRLDYNTEGLLLLTNDGDLARLMELPSSDIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVARVE 461
            K PS  R+++ +AR+G+ASRREAE+++EAG VTVNG  + TPALNV  RD + V                 G+ L  PE   P++W+ HK    + T  D +GR TVFD L K  MP  +M VGRLD N+EGLLLLTNDG L R MELP++  +R Y VR+ G+++E KL  +R+G  +DGVRY G+ V+ +      ++G NAWLT+   EGKNR+IR++ +   + VNRL R  YGPF LG ++ G V  V+
Sbjct:    7 KTPSGDRIAKVLARAGIASRREAEKIIEAGRVTVNGKTILTPALNVTRRDRIVVD----------------GKELAEPE--APRIWIYHKPAGLVTTERDEKGRDTVFDALPK-DMP-RVMSVGRLDINSEGLLLLTNDGALKRTMELPATGWLRRYRVRIKGSLSEAKLDELRAGIEVDGVRYAGVEVKFDR-----QQGANAWLTMGLREGKNREIRRLMEAQGVIVNRLLRISYGPFQLGTLKPGAVEEVK 235          
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Match: A0A7Y7D4K3_9HYPH (Pseudouridine synthase n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A7Y7D4K3_9HYPH)

HSP 1 Score: 204 bits (518), Expect = 2.430e-57
Identity = 118/257 (45.91%), Postives = 162/257 (63.04%), Query Frame = 0
Query:  214 RLSRRIARSGMASRREAERLVEAGVVTVNGTPVQTPALNVGPRDIVKVKVRLGSLVPFRIGRCCRGRALERPEDHTPKLWMVHKTRNELVTRHDPEGRATVFDRLAKLKMPD---TLMPVGRLDYNTEGLLLLTNDGDLARLMELPSSDIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVARVEIPKAFL 467
            R+++ IAR+G+ SRREAER++EAG VTV+G  + +PALNV P +I+ V                 G+AL  P+   P+LW  HK R  + T +DPEGR TVFD+L     PD    ++ VGRLD+NTEGLLLLTNDG+LAR +E P+S +VR Y VRV+G + E+ L A++ G  IDGV+Y  +   ++      ++G NAW+ I   EGKNR++R+I + L   V RL RT YGP  LGK+  G +   EIP+  L
Sbjct:   12 RIAKVIARAGVCSRREAERMIEAGRVTVDGKKIDSPALNVVPTNIIVVD----------------GKAL--PDKQPPRLWKFHKARGLITTNNDPEGRPTVFDQL-----PDGTPRVISVGRLDFNTEGLLLLTNDGELARFLEKPNSGMVRRYRVRVHGRVNEDDLAALKEGPVIDGVQYGPVEAILDV-----QKGANAWININIREGKNREVRRIMESLGYEVTRLIRTDYGPVQLGKLERGHME--EIPRKAL 238          
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Match: A0A7X4D014_9PROT (Pseudouridine synthase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7X4D014_9PROT)

HSP 1 Score: 203 bits (516), Expect = 3.140e-57
Identity = 125/260 (48.08%), Postives = 156/260 (60.00%), Query Frame = 0
Query:  210 PSMMRLSRRIARSGMASRREAERLVEAGVVTVNGTPVQTPALNVGPRDIVKVKVRLGSLVPFRIGRCCRGRALERPEDHTPKLWMVHKTRNELVTRHDPEGRATVFDRLAKLKMPDTLMPVGRLDYNTEGLLLLTNDGDLARLMELPSSDIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVARVEIPKAFLRR 469
            P   R+++RIAR+G+ SRREAER + AG V+V+G  + TPA  V P   V V                 GR L+  E   P LW  HK    + T  DP+GR T+FDRL    +P  ++ VGRLD  TEGLLLLTNDGDLAR +ELPS+   R Y VRV G   E  L  +  G T+DGVRY  +  R++   G+   G NAWLT+   EGKNR+IRK+C +L LT NRL RT YGPF LGK+ AG V RV  P+  LR+
Sbjct:    9 PKGERIAKRIARAGLCSRREAERWIAAGRVSVDGRVLDTPAFAVLPHHRVTVD----------------GRPLKAKEP--PALWRYHKPAGLVTTNRDPQGRDTIFDRLPA-GLP-RVITVGRLDLTTEGLLLLTNDGDLARFLELPSTGWTRRYRVRVKGRPDEAALARLADGVTVDGVRYGPVQARLDRPPGQSG-GANAWLTMSIREGKNREIRKLCAHLGLTANRLIRTAYGPFQLGKLAAGAVERV--PERVLRQ 245          
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Match: A0A2E2DYS5_9PROT (Pseudouridine synthase n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E2DYS5_9PROT)

HSP 1 Score: 206 bits (523), Expect = 5.430e-57
Identity = 115/247 (46.56%), Postives = 160/247 (64.78%), Query Frame = 0
Query:  214 RLSRRIARSGMASRREAERLVEAGVVTVNGTPVQTPALNVGPRDIVKVKVRLGSLVPFRIGRCCRGRALERPEDHTPKLWMVHKTRNELVTRHDPEGRATVFDRLAKLKMPDTLMPVGRLDYNTEGLLLLTNDGDLARLMELPSSDIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVARV 460
            RL++RIAR+G+ SRR+AER +E G V+VNGT + +PALNVGP DIV V                 G+ L  PE    +LW  +K    +VT  D +GRA +F+RL   +MP  ++ +GRLD N+EGLLLLTNDGDLAR +ELP++  +R Y VRV+G +++EKL  + +G T++G+RY  +   +E      ++G NAW+++  TEGKNR+IRK+ +YL   VNRL R  YGPF L  +  GGV  V
Sbjct:   15 RLAKRIARAGLCSRRDAERWIEDGRVSVNGTLIDSPALNVGPDDIVVVD----------------GKPL--PEAQAARLWRYNKPPGLVVTAKDEKGRANIFERLPP-EMP-RVVSIGRLDLNSEGLLLLTNDGDLARRLELPATGWIRRYRVRVHGYVSQEKLDTVANGVTVEGIRYGEIRAELES-----QKGANAWVSVSLTEGKNREIRKVMEYLDYPVNRLIRVAYGPFQLSTLTRGGVEEV 236          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2014.6058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDE8_ECTSI1.480e-16676.14RNA pseudouridylate synthase domain-containing pro... [more]
A0A6H5J9J6_9PHAE1.400e-7770.77S4 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A835ZDT5_9STRA4.920e-6644.08Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A6H5J790_9PHAE2.270e-6063.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A3VHQ4_9RHOB4.150e-5847.64Pseudouridine synthase n=3 Tax=Roseobacteraceae Ta... [more]
A0A192ILM9_9HYPH6.460e-5845.00Pseudouridine synthase n=2 Tax=Alphaproteobacteria... [more]
UPI001F20AC471.970e-5746.46rRNA pseudouridine synthase n=2 Tax=unclassified O... [more]
A0A7Y7D4K3_9HYPH2.430e-5745.91Pseudouridine synthase n=1 Tax=Methylocystaceae ba... [more]
A0A7X4D014_9PROT3.140e-5748.08Pseudouridine synthase n=2 Tax=Rhodospirillaceae b... [more]
A0A2E2DYS5_9PROT5.430e-5746.56Pseudouridine synthase n=3 Tax=Rhodospirillales Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 213..270
e-value: 7.0E-10
score: 48.8
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 213..259
e-value: 2.1E-10
score: 40.2
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 213..274
score: 11.722
IPR000748Pseudouridine synthase, RsuA/RluB/E/FTIGRFAMTIGR00093TIGR00093coord: 296..456
e-value: 1.6E-36
score: 123.5
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 292..429
e-value: 9.7E-13
score: 48.5
IPR042092Pseudouridine synthase, RsuA/RluB/E/F, catalytic domainGENE3D3.30.70.1560coord: 355..450
e-value: 1.1E-42
score: 147.6
NoneNo IPR availableGENE3D3.30.70.580coord: 293..455
e-value: 1.1E-42
score: 147.6
NoneNo IPR availablePANTHERPTHR21600:SF2RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 212..461
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 212..461
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 198..335
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 210..265
e-value: 1.4E-15
score: 58.3
IPR018496Pseudouridine synthase, RsuA/RluB/E/F, conserved sitePROSITEPS01149PSI_RSUcoord: 331..345
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 291..452

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2014contigL-elsbetiae_contig2014:11490..14840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2014.6058.1mRNA_L-elsbetiae_contig2014.6058.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2014 11490..15498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2014.6058.1 ID=prot_L-elsbetiae_contig2014.6058.1|Name=mRNA_L-elsbetiae_contig2014.6058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=595bp
MLSIARHARGPCRRRQALLSARRAGLSATAVPARRTAAAGLRLLRLLPPH
EAAAPAAPSARRPPPLPQALLCLRRDDRLSSGAAGGVVSYARRALASSAT
VRGADSTEGNTGESGIRGRQLEKEHGGAGVAVSGGAADGWEEEEREPKAD
VGAPFDFLPEFSDDFGAEGDAFLGTEEEEEEEEGEEHSASGVDESEGHVD
EVLRSQIKDPSMMRLSRRIARSGMASRREAERLVEAGVVTVNGTPVQTPA
LNVGPRDIVKVKVRLGSLVPFRIGRCCRGRALERPEDHTPKLWMVHKTRN
ELVTRHDPEGRATVFDRLAKLKMPDTLMPVGRLDYNTEGLLLLTNDGDLA
RLMELPSSDIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEG
GGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLG
KVRAGGVARVEIPKAFLRRLEEGTAGGSLGAGGGGGGSGRRMAGGPGPGT
GKRRDAEAGGMSPPRQGDSSLRGEGLDSRRSGDGRGAYAGAYAGGGGSGG
SRSVGGTWGGARGKKGARIRKGVGAPMSRGDNSARGRAQQQRAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR000748PsdUridine_synth_RsuA/RluB/E/F
IPR006145PsdUridine_synth_RsuA/RluA
IPR042092PsdUridine_s_RsuA/RluB/E/F_cat
IPR036986S4_RNA-bd_sf
IPR018496PsdUridine_synth_RsuA/RluB_CS
IPR020103PsdUridine_synth_cat_dom_sf