prot_L-elsbetiae_contig2012.6053.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2012.6053.1
Unique Nameprot_L-elsbetiae_contig2012.6053.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length95
Homology
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BLAST of mRNA_L-elsbetiae_contig2012.6053.1 vs. uniprot
Match: D7FT14_ECTSI (Putative AAA family ATP ase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT14_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 1.800e-8
Identity = 31/49 (63.27%), Postives = 34/49 (69.39%), Query Frame = 0 
Query:   36 YGHSRCSNYYEDEGVMRAGAHGPIPPRLPNGSGLVRKRKRVPLGRLDNN 84
            YG    S+ ++DE   R G   PIPPRLPNG GLVRKRK VP GRLDNN
Sbjct:  109 YGRYGRSSSFDDEANTRGGQGPPIPPRLPNGPGLVRKRKFVPPGRLDNN 157
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BLAST of mRNA_L-elsbetiae_contig2012.6053.1 vs. uniprot
Match: A0A6H5JMF7_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF7_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 6.970e-6
Identity = 30/50 (60.00%), Postives = 33/50 (66.00%), Query Frame = 0 
Query:   37 GHSR---CSNYYEDEGVMRAGAHGPIPPRLPNGSGLVRKRKRVPLGRLDN 83
            GH R    S+ ++DE   R G    IPPRLPNG GLVRKRK VP GRLDN
Sbjct:  387 GHGRYGSSSSSFDDEVNTRGGQGPSIPPRLPNGPGLVRKRKFVPPGRLDN 436
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2012.6053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT14_ECTSI1.800e-863.27Putative AAA family ATP ase n=1 Tax=Ectocarpus sil... [more]
A0A6H5JMF7_9PHAE6.970e-660.00AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2012contigL-elsbetiae_contig2012:13892..14840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2012.6053.1mRNA_L-elsbetiae_contig2012.6053.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2012 13890..14840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2012.6053.1 ID=prot_L-elsbetiae_contig2012.6053.1|Name=mRNA_L-elsbetiae_contig2012.6053.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=95bp
GGAARGAWGGGSGYGSYNVDTNGYGGGGGNDGTNGYGHSRCSNYYEDEGV
MRAGAHGPIPPRLPNGSGLVRKRKRVPLGRLDNNNSSSTGGGGKL
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