prot_L-elsbetiae_contig19943.5980.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19943.5980.1
Unique Nameprot_L-elsbetiae_contig19943.5980.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length331
Homology
BLAST of mRNA_L-elsbetiae_contig19943.5980.1 vs. uniprot
Match: A0A6H5L6Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q7_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 3.800e-66
Identity = 144/276 (52.17%), Postives = 182/276 (65.94%), Query Frame = 0
Query:   52 LERAARGVLLDVQERHGLG-GVT-HGTPIPPPGVLSAGSDFAAQTNTVLGERFQQDPANRLWVCTLSYESALRKLSASGEAVSGKKIARKLAAARLVAGLIESTDPAGTDLAVATDEEASADNTWAKQDESVAEMSEQLSANTGGCGIAVEVDRSEGDTEFDITIDDAHLAAQRCLERAARGVLLNVQERHGLGGVETEHGTPIPPPGVLSAASDFAAQTNAVLKESFQQNPANRLWVCSLSHQSALRKLSASGEAVSGKKIARKLAAVRLVAELL 325
            LE  ARGVLLDVQ++HGLG GV+ +GTPIPPPGVLSA   F  +T  V+ E F QD  +RLW CTLSY+SALR++ A+GEAVSGKK+ARKLAAARLVA LI +T   GT+        A A     ++D      S   + ++        V+ S        +  D   AA R  E  ARGVLL+VQ +HGLG   + +GTPIPPPGVLSA   F+  T  V+ E+F Q+  +RLW C+LS++SALR++ A+GEAVSGKK+ARKLAA RLVA L+
Sbjct:   52 LEHGARGVLLDVQDKHGLGVGVSPNGTPIPPPGVLSAADLFVEKTMGVVTETFNQDSTSRLWACTLSYKSALREVHATGEAVSGKKVARKLAAARLVASLISAT---GTNELDRGGSAAGAMPDMPEEDGMTGRQSPDTNVDSESSVPRGTVNSSTS------SYGDGGSAALRSFEGGARGVLLDVQNKHGLGVGVSPNGTPIPPPGVLSALHSFSENTMGVVTETFNQDSTSRLWACTLSYKSALREVHATGEAVSGKKVARKLAAARLVASLI 318          
BLAST of mRNA_L-elsbetiae_contig19943.5980.1 vs. uniprot
Match: D7FR00_ECTSI (ATP-dependent RNA helicase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR00_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 8.230e-66
Identity = 148/279 (53.05%), Postives = 186/279 (66.67%), Query Frame = 0
Query:   52 LERAARGVLLDVQERHGLG-GVT-HGTPIPPPGVLSAGSDFAAQTNTVLGERFQQDPANRLWVCTLSYESALRKLSASGEAVSGKKIARKLAAARLVAGLIESTDP----AGTDLAVATDEEASADNTWAKQDESVAEMSEQLSANTGGCGIAVEVDRSEGDTEFDITIDDAHLAAQRCLERAARGVLLNVQERHGLGGVETEHGTPIPPPGVLSAASDFAAQTNAVLKESFQQNPANRLWVCSLSHQSALRKLSASGEAVSGKKIARKLAAVRLVAEL 324
            LE  ARGVLLDVQ++HGLG GV+ +GTPIPPPGVLSA   FA +T  ++ E F QD  +RLW CTLSY+SALR++ ASGEAVSGKK+ARKLAAARLVA LI +T       G+  AVA  EE +   T  +  ++       L + TG          S+GD            AA +  ER AR VLL+VQ++HGLG   + +GTPIPP GVLSA   FA +T  V+ E+F Q+  +RLW C+LS++SALR++ ASGEAVSGK++ARKLAA RLVA L
Sbjct:  570 LEHGARGVLLDVQDKHGLGVGVSPNGTPIPPPGVLSAVHLFAEKTMGIVMETFNQDSTSRLWACTLSYKSALREVHASGEAVSGKKVARKLAAARLVASLISATGTNELHRGSGAAVAMPEEETTAMTGRQPPDANVRSESSLGSGTGNSSTT-----SDGDDGS---------AALQSFERGARAVLLDVQDKHGLGVGVSPNGTPIPPSGVLSAVDIFAEKTMGVVTETFNQDSTSRLWACTLSYKSALREVHASGEAVSGKQMARKLAAARLVASL 834          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19943.5980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6Q7_9PHAE3.800e-6652.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR00_ECTSI8.230e-6653.05ATP-dependent RNA helicase, putative n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19943contigL-elsbetiae_contig19943:438..1430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19943.5980.1mRNA_L-elsbetiae_contig19943.5980.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19943 338..1596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19943.5980.1 ID=prot_L-elsbetiae_contig19943.5980.1|Name=mRNA_L-elsbetiae_contig19943.5980.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=331bp
MNREADQDERRPEPRFASIDGRSLYFGLAGNEGDTESDIGTDDAHLTTQL
CLERAARGVLLDVQERHGLGGVTHGTPIPPPGVLSAGSDFAAQTNTVLGE
RFQQDPANRLWVCTLSYESALRKLSASGEAVSGKKIARKLAAARLVAGLI
ESTDPAGTDLAVATDEEASADNTWAKQDESVAEMSEQLSANTGGCGIAVE
VDRSEGDTEFDITIDDAHLAAQRCLERAARGVLLNVQERHGLGGVETEHG
TPIPPPGVLSAASDFAAQTNAVLKESFQQNPANRLWVCSLSHQSALRKLS
ASGEAVSGKKIARKLAAVRLVAELLVLVPA*
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