prot_L-elsbetiae_contig19873.5948.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19873.5948.1
Unique Nameprot_L-elsbetiae_contig19873.5948.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length84
Homology
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Match: D7FVC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC4_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 2.990e-40
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0
Query:    1 MSRMVEDLFSPDLDLLMQCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRLL 78
            MSRMVEDLFS D DLL+ CPNGRHAVGQNNEKFVPN QHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKR+L
Sbjct: 6288 MSRMVEDLFSQDFDLLVPCPNGRHAVGQNNEKFVPNSQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRML 6365          
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Match: I2CQF0_NANGC (Hect e3 ubiquitin (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQF0_NANGC)

HSP 1 Score: 100 bits (250), Expect = 3.580e-26
Identity = 49/80 (61.25%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    1 MSRMVEDLFSPD-LDLLMQCPNGRHAVGQNNEKFVPNPQHSS-PLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRLL 78
            MSR++EDL+SP+ L LL+ CPN +H +  N +KF+PNPQ ++ PLAL M  FVG+LMG+SLR  LCLPF  P LIWKRLL
Sbjct:    1 MSRVLEDLYSPETLYLLIPCPNAQHGLPTNTDKFLPNPQLATCPLALEMFEFVGKLMGMSLRANLCLPFHFPSLIWKRLL 80          
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Match: A0A482SX25_9ARCH (HECT domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SX25_9ARCH)

HSP 1 Score: 107 bits (268), Expect = 1.800e-25
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    2 SRMVEDLFSPDLDLLMQCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRLL 78
            SR+VEDLFS   +LL+ CPNG+ AV    +K+VPNP+HS PLAL M  FVGRLMG+S+R +LCLPF  P LIWK++L
Sbjct:  300 SRIVEDLFSDHFNLLLLCPNGQQAVHSGMDKYVPNPKHSGPLALEMFEFVGRLMGMSIRAKLCLPFDFPPLIWKKIL 376          
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Match: A0A7S2BNW0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNW0_9STRA)

HSP 1 Score: 105 bits (263), Expect = 3.080e-25
Identity = 45/78 (57.69%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 MSRMVEDLFSPDLDLLMQCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRLL 78
            M+ MV DL SP+  L++ CPNG H + +N +K++PNP HSSPLA+ ML FVG+LMG+SLRT+  LPF LPGL+WK ++
Sbjct:  109 MTEMVTDLHSPEFSLMILCPNGVHKINKNMDKYLPNPAHSSPLAIQMLEFVGKLMGVSLRTKATLPFSLPGLVWKGII 186          
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Match: A0A7S1G912_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G912_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.950e-25
Identity = 44/77 (57.14%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    2 SRMVEDLFSPDLDLLMQCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRLL 78
            +RMVEDLFSP   LL+ CPNGR++VG NNEK++P+   +SP A+ M  FVGRLMG+S+R ++CLPF  P L+W++L+
Sbjct:   10 NRMVEDLFSPHFGLLVLCPNGRNSVGLNNEKYLPDSSRTSPRAMQMFEFVGRLMGMSMRHKMCLPFDFPSLVWRQLV 86          
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Match: A0A7S3UVM0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVM0_HETAK)

HSP 1 Score: 103 bits (256), Expect = 5.650e-24
Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    2 SRMVEDLFSPDLDLLMQCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRLL 78
            + MVEDL SPD  L + CPNG+H V  N +K+VP+P H SPLA+ ML FVG+LMG+SLRT+  LPF LP  +WK +L
Sbjct:  173 TEMVEDLHSPDFGLFVLCPNGQHQVAVNTDKYVPSPAHESPLAMQMLEFVGKLMGISLRTKATLPFSLPAFVWKGVL 249          
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Match: W7TSE1_9STRA (Hect e3 ubiquitin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSE1_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.620e-23
Identity = 49/80 (61.25%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 MSRMVEDLFSPD-LDLLMQCPNGRHAVGQNNEKFVPNPQHSS-PLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRLL 78
            MSR++EDL+SP+ L+LL+ CPN +H +  N +KF+PNPQ ++ PLAL M  FVG+LMG+SLR  LCLPF  P LIWKRLL
Sbjct: 1288 MSRVLEDLYSPETLNLLIPCPNAQHGLPTNTDKFLPNPQLATCPLALEMFEFVGKLMGMSLRANLCLPFHFPSLIWKRLL 1367          
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Match: A0A836C961_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C961_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.630e-22
Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    2 SRMVEDLFSPDLDLLMQCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRLL 78
            +R+ +DLFSP   L   CPN RHA G N EK+VP+   +S LAL  L FVGRLMG+SLRTRL LPF+LP L+WKRL+
Sbjct:  118 TRVTDDLFSPRFALFAPCPNARHATGLNGEKYVPS---ASALALQQLAFVGRLMGISLRTRLALPFELPSLVWKRLI 191          
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Match: A0A7S2WTG5_9STRA (Hypothetical protein (Fragment) n=3 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTG5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 8.120e-21
Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    1 MSRMVEDLFSPDLDLLMQCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWK 75
            M+ +V DL S D  L + CPNG H +  N +K++PNP+ SSPLA+ ML FVG+LMG+SLRT+  LPF  P ++WK
Sbjct:  943 MTEIVTDLHSQDFSLFILCPNGVHKINNNMDKYIPNPRSSSPLAIQMLEFVGKLMGVSLRTKATLPFNFPSIVWK 1017          
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Match: A0A7S3M4G4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4G4_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.320e-20
Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 0
Query:    1 MSRMVEDLFSPDLDLLMQCPNGRHAVGQNNEKFVPNPQH-SSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRLL 78
            MSR+VEDLFS   DLL+ CPN +  V  N +K++PNPQH  S L   M  F+G+LM +S+RT+L LPF+ P ++WK+L+
Sbjct:   94 MSRIVEDLFSEHFDLLLLCPNAQQQVHSNMDKYIPNPQHIGSKLVREMFEFIGKLMAVSVRTKLYLPFEFPPIVWKKLV 172          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19873.5948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVC4_ECTSI2.990e-4092.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
I2CQF0_NANGC3.580e-2661.25Hect e3 ubiquitin (Fragment) n=1 Tax=Nannochlorops... [more]
A0A482SX25_9ARCH1.800e-2562.34HECT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S2BNW0_9STRA3.080e-2557.69Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1G912_9STRA3.950e-2557.14Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3UVM0_HETAK5.650e-2458.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TSE1_9STRA1.620e-2361.25Hect e3 ubiquitin n=1 Tax=Nannochloropsis gaditana... [more]
A0A836C961_9STRA3.630e-2261.04HECT domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2WTG5_9STRA8.120e-2153.33Hypothetical protein (Fragment) n=3 Tax=Rhizochrom... [more]
A0A7S3M4G4_9STRA1.320e-2051.90Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1750.10coord: 3..79
e-value: 1.6E-10
score: 42.8
NoneNo IPR availablePANTHERPTHR22870:SF347coord: 1..77
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 1..77
IPR000569HECT domainPFAMPF00632HECTcoord: 4..78
e-value: 1.7E-6
score: 27.7
IPR000569HECT domainPROSITEPS50237HECTcoord: 1..83
score: 9.043
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 2..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19873contigL-elsbetiae_contig19873:1116..1864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19873.5948.1mRNA_L-elsbetiae_contig19873.5948.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19873 1116..1864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19873.5948.1 ID=prot_L-elsbetiae_contig19873.5948.1|Name=mRNA_L-elsbetiae_contig19873.5948.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
MSRMVEDLFSPDLDLLMQCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRF
VGRLMGLSLRTRLCLPFQLPGLIWKRLLVRRGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
IPR035983Hect_E3_ubiquitin_ligase