prot_L-elsbetiae_contig1985.5935.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1985.5935.1
Unique Nameprot_L-elsbetiae_contig1985.5935.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1296
Homology
BLAST of mRNA_L-elsbetiae_contig1985.5935.1 vs. uniprot
Match: A0A6H5LC46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC46_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 7.830e-72
Identity = 198/357 (55.46%), Postives = 214/357 (59.94%), Query Frame = 0
Query:  947 PPRTLFSASSFGRRGPXXXXXXXXXXXXXXXXXXX-KWRPSFGSXXXXXXXGQS-PAGAMHAPWAAFSTPSRDRDGAVVPPSGSMGAGTIGSAASARRRRGGGAG---NGPLGRLLQQVRARCDGDEARLLSGEFPFRQASTLKASSGDPDGSENSGXXXXXXXXXXXXXXXVRSRRDHGDPRTRCSVALDVTVLRPAPRQSAALVGLAGXXXXXERNSGYGQGG-GASGGLVWFSCLVHRVVDVSSGSSSRGNSSGSGSSCRASPGDDRS--EGAATRIGRLRPLEGGCVDAFFKQDTRRAVDMCPGSQLRIYDPCCAWYDGQAGAEAGGGGAGALLMCTQLCEPYPSSLPPLPAP 1295
            PPRT+F+ SSFGR  P  XXXXXXXXXXXXXXXX  KWRPSFGS       GQS  AGA HAP AAFSTP+RD                                   NGPLGRLLQQVRARCDGDEARLLSGEFPFRQ S+  AS     G+ NS          XXXX   +SRRD+GDPRTRCSVALD TV+ PA     + VG  G        +  GQ G G + GLVWFSC VH VVDVS G    GN    GS C  S   D +     AT  G L  LEG  VD  FKQDTRRAVD+ PGSQLRIYDP C WYD + G E  GG A ALL+CTQLCEPYPS LP LP+P
Sbjct:  276 PPRTMFAPSSFGRSAPTSXXXXXXXXXXXXXXXXGGKWRPSFGSAGGARGGGQSLAAGATHAPRAAFSTPARDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPLGRLLQQVRARCDGDEARLLSGEFPFRQPSS--ASKSTTGGNNNS---HLDGVGVXXXXSGAKSRRDYGDPRTRCSVALDATVMLPAATPRGSSVGFEGGLWGGGEGNELGQAGRGGASGLVWFSCFVHHVVDVSLGLG--GNRVRPGSRCATSAAGDAAGWSSVATDFGCLHRLEGVRVDGLFKQDTRRAVDVGPGSQLRIYDPSCVWYDAEVGGE--GGRAEALLVCTQLCEPYPSCLPALPSP 623          
BLAST of mRNA_L-elsbetiae_contig1985.5935.1 vs. uniprot
Match: D7FXF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF5_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 1.530e-54
Identity = 161/333 (48.35%), Postives = 173/333 (51.95%), Query Frame = 0
Query:  947 PPRTLFSASSFGRRGPXXXXXXXXXXXXXXXXXXXKWRPSFGSXXXXXXXGQSPA-GAMHAPWAAFSTPSRDRDGAVVPPSGSMGAGTIGSAASARRRRGGGAG-----NGPLGRLLQQVRARCDGDEARLLSGEFPFRQASTLKASSGDPDGSENSGXXXXXXXXXXXXXXXVRSRRDHGDPRTRCSVALDVTVLRPAPRQSAALVGLAGXXXXXERNSGYGQ-GGGASGGLVWFSCLVHRVVDVSSGSSSRGNSSGSGSSCRASPGDDR----------SEGAATRIGRLRPLEGGCVDAFFKQDTRRAVDMCPGSQLRIYDPCCAWYDGQ 1262
            PPRT+F+ S+FGR GP                   KWRPSFGS       GQSPA GAMHAP AAFSTP+RDR                                    NGPLGRLLQQVRARCDGDEARLLSGEFPFRQ S+   ++     S    X         XXXX  +SRRD GDPRTRC VALD TV+ PA       VG  G        +  GQ GGG   GLV FSC VH VVDVS    S G S       R SPG  R            G AT  GRL  LEG  VD  FKQDTRRAVD+ PGSQLRIYDPCC WYD +
Sbjct:  912 PPRTMFAPSTFGRSGPTASSAAAASTSASTTGG--KWRPSFGSASGARGGGQSPAAGAMHAPRAAFSTPARDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPLGRLLQQVRARCDGDEARLLSGEFPFRQPSSASKATT----SXXXXXGHLDDVGVGXXXXGGKSRRDPGDPRTRCRVALDATVMLPAATPRGPSVGFEGGLWGGGEGNELGQAGGGGVTGLVRFSCFVHHVVDVSL---SLGGS-------RVSPGSRRVTSAVGYAAGPSGVATDFGRLHRLEGVRVDGIFKQDTRRAVDVGPGSQLRIYDPCCVWYDAE 1228          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1985.5935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LC46_9PHAE7.830e-7255.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXF5_ECTSI1.530e-5448.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 692..717

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1985contigL-elsbetiae_contig1985:8143..16528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1985.5935.1mRNA_L-elsbetiae_contig1985.5935.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1985 8143..16528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1985.5935.1 ID=prot_L-elsbetiae_contig1985.5935.1|Name=mRNA_L-elsbetiae_contig1985.5935.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1296bp
MHRTAERYHHQRREEQGRGDGYDEDWDDDVYYAAASRPGSAGSSSGGARG
RENHAGGGGGGGGAGERQGEPDSASGRERRSGPERPASKRHYMKVPNMRH
LRAVRPTPTPVADGYPLGAGGGTSGSHNPHRRGRLLSSPRPSVCTDPGGP
RGARPPPGGGGSGPPPRKAGPRPPGGGGGAGPGGGGGARGGEGPDAAAAA
GAAGAACAAEPPPAAAPSPSKRRGRDDRAGRSAGNGGSLVLLRGSPRRGR
GGDDGPTGGRAAAGGSSLRATTTPPSPPPQPPPPPLSPASPTAVTAGVAA
GVAAGVAAGAAAVAGGVPATGKRKRPAAGASQRFGSPSMAWPKLRRGEAS
EEPKAAATPRRVLARGEARERAGQADGGGGGCGGRGEQRPGNGLPAAAAA
AAATAPSSLLSPVSSSYRPATPSNGGGNTGSHPPVHVGTSPPGVFSSSRQ
QGGGGSGGGSGGGAGGGGRGKGPARRGGGGGGGGAGTGGGVGAAANGPSL
SDRPARWAVKGGGGSSAWSPLRSPGAPSSSRQGGAGGGSSGGSESRDSKA
RSSFAAVSAARKAPGRSIPSSSSSSSAVGPGGFPRLGRGRGGSRSGGGGD
EEVPTFKLTSVFQAAAAKNSSARQPTRGAWGTDSKNHHPEEGWRRGGSSS
QHSHARGGSRQQQHARSLSSSGEASTPSFDPTRMRARPARTAAAVEAEEE
DEEEDEEEDEVEEVVSDDDDEDGGGGHGVVDDAWADAQEGGGGRDGADGG
VGGVGGVGGVGGVGGGVDGVGGGDGGVADYENQLLGQEGCGNATLRGAEP
EAQQKQPSSGGGIRDGASMETAGDASDSAAGKRTARRPQPEEARRHGGPG
ARLDGRAGAGAWGAAGGVAVSPATTQPRRTSSDRPAASAAAATAARETPR
DKNHANGQQRQQQRQHQQGQPQQQQQGQPQDEPNKEPSPPPRTPVRPPRT
LFSASSFGRRGPPSSSSSSAAAAAASSAAGGKWRPSFGSGGGGRGGGQSP
AGAMHAPWAAFSTPSRDRDGAVVPPSGSMGAGTIGSAASARRRRGGGAGN
GPLGRLLQQVRARCDGDEARLLSGEFPFRQASTLKASSGDPDGSENSGGG
GGVGVAGGGGGGGVRSRRDHGDPRTRCSVALDVTVLRPAPRQSAALVGLA
GGGGGGERNSGYGQGGGASGGLVWFSCLVHRVVDVSSGSSSRGNSSGSGS
SCRASPGDDRSEGAATRIGRLRPLEGGCVDAFFKQDTRRAVDMCPGSQLR
IYDPCCAWYDGQAGAEAGGGGAGALLMCTQLCEPYPSSLPPLPAPP
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