prot_L-elsbetiae_contig19786.5905.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19786.5905.1
Unique Nameprot_L-elsbetiae_contig19786.5905.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length131
Homology
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Match: A0A835YRX4_9STRA (Coatomer WD associated region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX4_9STRA)

HSP 1 Score: 191 bits (486), Expect = 5.260e-54
Identity = 93/131 (70.99%), Postives = 112/131 (85.50%), Query Frame = 0
Query:    1 SLHRCDLALVERCAVNAQDLGGLLLLHSSTGNREGMLALAEDARKSGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKDLATVSAKASQALADPVEYPNMFDDLDWALKV 131
            +L  CD+ALVE+CA N+ DLGGLLLLHSSTGN  G+ ALA DA K+G+TNV FL+LF+ G++EECLELLV AGR+PEAAFMARTYLPS M RLV LWKKDL +VS KA++ALADP +YPN+F+DLD AL+V
Sbjct:  689 ALSECDMALVEKCAANSGDLGGLLLLHSSTGNAAGLAALAADAAKAGKTNVGFLALFLLGRLEECLELLVKAGRLPEAAFMARTYLPSEMPRLVELWKKDLQSVSVKAAEALADPSQYPNLFEDLDVALRV 819          
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Match: D8LNJ0_ECTSI (Vesicle coat complex COPI, beta sub-unit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ0_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 2.910e-50
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0
Query:   18 QDLGGLLLLHSSTGNREGMLALAEDARKSGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKDLATVSAK 107
            QDLGGLLLLHSSTGNREGMLALAEDARK+GRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLV LWKKDLATVSAK
Sbjct:  261 QDLGGLLLLHSSTGNREGMLALAEDARKAGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAK 350          
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Match: A0A7S3HIJ6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIJ6_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.850e-46
Identity = 75/131 (57.25%), Postives = 104/131 (79.39%), Query Frame = 0
Query:    1 SLHRCDLALVERCAVNAQDLGGLLLLHSSTGNREGMLALAEDARKSGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKDLATVSAKASQALADPVEYPNMFDDLDWALKV 131
            +L   D+ L E+CA  + DL GLLLL++S GN+ GM+ LA  AR++GR NVAFL+ F+ G+VEE ++LL+ A R+PEAAFMARTY+PS + R++ +WK+DL T++ KA++ALADPV+YPN+F DL WALKV
Sbjct:   54 ALSNGDIPLAEQCAQRSADLSGLLLLYTSAGNKPGMVELATTAREAGRFNVAFLAYFLTGQVEEAIQLLIDANRIPEAAFMARTYMPSQISRVLEIWKRDLKTINEKAAEALADPVKYPNLFPDLSWALKV 184          
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Match: F0YGS9_AURAN (Coatomer subunit beta' n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGS9_AURAN)

HSP 1 Score: 166 bits (421), Expect = 2.930e-45
Identity = 76/131 (58.02%), Postives = 103/131 (78.63%), Query Frame = 0
Query:    1 SLHRCDLALVERCAVNAQDLGGLLLLHSSTGNREGMLALAEDARKSGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKDLATVSAKASQALADPVEYPNMFDDLDWALKV 131
            +L  CD+AL ERCA N++DL GLL+L+++TG+R G+L LAEDA   G+ N+AF+S F+ G+VE+C ELL+   R+PEA  +ARTYLPS + R V+LW++DL  VS +A+ ALADP EYPN+F D+DWALKV
Sbjct:  696 ALASCDMALAERCATNSKDLAGLLMLYTATGDRFGVLKLAEDAVAQGKLNIAFVSFFILGEVEKCFELLIDTDRIPEATLLARTYLPSHISRSVSLWREDLKQVSERAAAALADPAEYPNLFPDIDWALKV 826          
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Match: A0A7S3ZMY1_9STRA (Coatomer subunit beta' n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMY1_9STRA)

HSP 1 Score: 166 bits (420), Expect = 3.950e-45
Identity = 80/131 (61.07%), Postives = 100/131 (76.34%), Query Frame = 0
Query:    1 SLHRCDLALVERCAVNAQDLGGLLLLHSSTGNREGMLALAEDARKSGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKDLATVSAKASQALADPVEYPNMFDDLDWALKV 131
            +L  CDL L ERCA NA+DL GLLLLH++ GNR G+ ALA +A   G+ NVAF+S F+ G VE+C ELL+   R+PEAA ++RTYLPS + R V LW++DL  VS +A+ ALADPVEYPN+F DLDWALKV
Sbjct:  691 ALANCDLDLAERCASNAKDLAGLLLLHTAAGNRAGISALAANAVLQGKFNVAFISFFILGDVEKCFELLLDTNRIPEAALLSRTYLPSQISRAVRLWREDLRQVSDRAAAALADPVEYPNLFPDLDWALKV 821          
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Match: A0A7S2G0J9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0J9_9STRA)

HSP 1 Score: 156 bits (395), Expect = 3.330e-44
Identity = 75/131 (57.25%), Postives = 98/131 (74.81%), Query Frame = 0
Query:    1 SLHRCDLALVERCAVNAQDLGGLLLLHSSTGNREGMLALAEDARKSGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKDLATVSAKASQALADPVEYPNMFDDLDWALKV 131
            +L   DL   E+CA  + D  GLLLL++ TGN EG   LA  A++ G+TNVAF+SLF+ G++EEC+ELL+  GR+PEAAF+ARTY+PS M ++V  WK DL  VS +A+QALADP EYPN+F DLDWA+ V
Sbjct:  164 ALSTGDLPRAEQCAEASGDTAGLLLLYTCTGNAEGAKKLAVQAKELGKTNVAFISLFLLGRIEECIELLMQTGRIPEAAFLARTYMPSEMPQIVIKWKADLTKVSERAAQALADPAEYPNLFPDLDWAVMV 294          
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Match: A0A7S2SR98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR98_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.700e-44
Identity = 81/131 (61.83%), Postives = 100/131 (76.34%), Query Frame = 0
Query:    1 SLHRCDLALVERCAVNAQDLGGLLLLHSSTGNREGMLALAEDARKSGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKDLATVSAKASQALADPVEYPNMFDDLDWALKV 131
            +L R  L L E CA  + D+ GLLLL+SSTGN EG   LA+ AR  G+TNVAFL+LF+  +VEEC+ LLV   RVPEAAFMARTY+PS M ++V  W++DLA VS +A++ALADP EYPN+F DLDWALKV
Sbjct:  711 ALSRGKLELAEECATASGDMAGLLLLYSSTGNAEGAKKLADRARAMGKTNVAFLALFLLNEVEECINLLVETDRVPEAAFMARTYMPSMMSKIVVQWREDLAKVSERAAKALADPGEYPNLFPDLDWALKV 841          
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Match: A0A7S3HIV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIV9_9STRA)

HSP 1 Score: 162 bits (410), Expect = 8.010e-44
Identity = 75/131 (57.25%), Postives = 104/131 (79.39%), Query Frame = 0
Query:    1 SLHRCDLALVERCAVNAQDLGGLLLLHSSTGNREGMLALAEDARKSGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKDLATVSAKASQALADPVEYPNMFDDLDWALKV 131
            +L   D+ L E+CA  + DL GLLLL++S GN+ GM+ LA  AR++GR NVAFL+ F+ G+VEE ++LL+ A R+PEAAFMARTY+PS + R++ +WK+DL T++ KA++ALADPV+YPN+F DL WALKV
Sbjct:   54 ALSNGDIPLAEQCAQRSADLSGLLLLYTSAGNKPGMVELATTAREAGRFNVAFLAYFLTGQVEEAIQLLIDANRIPEAAFMARTYMPSQISRVLEIWKRDLKTINEKAAEALADPVKYPNLFPDLSWALKV 184          
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Match: F0YKY2_AURAN (Coatomer subunit beta' n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKY2_AURAN)

HSP 1 Score: 158 bits (400), Expect = 2.060e-42
Identity = 73/131 (55.73%), Postives = 101/131 (77.10%), Query Frame = 0
Query:    1 SLHRCDLALVERCAVNAQDLGGLLLLHSSTGNREGMLALAEDARKSGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKDLATVSAKASQALADPVEYPNMFDDLDWALKV 131
            +L +CDL+L ERCA NA+DL GLL+L+++ G+R G+  LA +A   G+ N+AF+S FV G++E+C ELL+   R+PEAAF+ARTYLPS + R V +W++DL  VS +A+  LADP EYPN+F DL+WALKV
Sbjct:  691 ALAKCDLSLAERCASNARDLAGLLMLYTAVGDRAGVQTLAGNAVAQGKFNIAFVSFFVLGEIEKCFELLLDTDRIPEAAFLARTYLPSQISRAVKIWREDLKQVSDRAAAGLADPEEYPNLFPDLEWALKV 821          
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Match: A0A7S3WA69_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WA69_EMIHU)

HSP 1 Score: 156 bits (394), Expect = 1.340e-41
Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 0
Query:    1 SLHRCDLALVERCAVNAQDLGGLLLLHSSTGNREGMLALAEDARKSGRTNVAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKDLATVSAKASQALADPVEYPNMFDDLDWALK 130
            +LH  DL L E C V A DLGGLLLL+SSTG+ EG+  LAE +RK G+ NV+FL  F+ G+  ECLELL+SAGR PEAAF+ARTY PS   R+V LWK+ L  V+ KA++++ADP +YPN+FD L+ ALK
Sbjct:  706 ALHAADLRLAEECLVRAADLGGLLLLYSSTGHAEGIDKLAELSRKKGKLNVSFLCSFLRGRPTECLELLLSAGRAPEAAFLARTYTPSQTSRMVGLWKEQLREVNPKAAESIADPADYPNLFDGLELALK 835          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19786.5905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRX4_9STRA5.260e-5470.99Coatomer WD associated region-domain-containing pr... [more]
D8LNJ0_ECTSI2.910e-5097.78Vesicle coat complex COPI, beta sub-unit n=1 Tax=E... [more]
A0A7S3HIJ6_9STRA4.850e-4657.25Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
F0YGS9_AURAN2.930e-4558.02Coatomer subunit beta' n=1 Tax=Aureococcus anophag... [more]
A0A7S3ZMY1_9STRA3.950e-4561.07Coatomer subunit beta' n=4 Tax=Pelagomonas calceol... [more]
A0A7S2G0J9_9STRA3.330e-4457.25Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2SR98_9STRA3.700e-4461.83Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3HIV9_9STRA8.010e-4457.25Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
F0YKY2_AURAN2.060e-4255.73Coatomer subunit beta' n=1 Tax=Aureococcus anophag... [more]
A0A7S3WA69_EMIHU1.340e-4159.23Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.470coord: 1..121
e-value: 1.6E-37
score: 131.0
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 10..130
NoneNo IPR availablePANTHERPTHR19876:SF31COATOMER SUBUNIT BETA'-3coord: 10..130
IPR006692Coatomer, WD associated regionPFAMPF04053Coatomer_WDADcoord: 2..86
e-value: 8.1E-22
score: 77.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19786contigL-elsbetiae_contig19786:191..1233 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19786.5905.1mRNA_L-elsbetiae_contig19786.5905.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19786 191..1233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19786.5905.1 ID=prot_L-elsbetiae_contig19786.5905.1|Name=mRNA_L-elsbetiae_contig19786.5905.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp
SLHRCDLALVERCAVNAQDLGGLLLLHSSTGNREGMLALAEDARKSGRTN
VAFLSLFVCGKVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVALWKKD
LATVSAKASQALADPVEYPNMFDDLDWALKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006692Coatomer_WD-assoc_reg