prot_L-elsbetiae_contig1955.5815.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1955.5815.1
Unique Nameprot_L-elsbetiae_contig1955.5815.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length176
Homology
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: D8LL95_ECTSI (Coatomer subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL95_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 4.990e-100
Identity = 164/175 (93.71%), Postives = 170/175 (97.14%), Query Frame = 0
Query:    1 QLLSICREYVTAIRIKAAVAETKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSAGGKR 175
            +LLSICREYVTAIRIKAAVAETKDTVR+MELLAYFTCCNLQPAHLLLALRMAMASAFKGKN+ITAASFAQRLLELPDLSSERHADLR KAQKVLQKSQQMARNEHTLDYDERNPFEVDCQ+LKPIYRG+PSCKCPYC SAY  SAKG VCVTCGLSQ+GVETLGLVTTSSAGGKR
Sbjct: 1084 ELLSICREYVTAIRIKAAVAETKDTVRSMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRIKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQSLKPIYRGTPSCKCPYCGSAYPLSAKGMVCVTCGLSQIGVETLGLVTTSSAGGKR 1258          
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A6H5KXQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXQ0_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 3.320e-84
Identity = 141/153 (92.16%), Postives = 146/153 (95.42%), Query Frame = 0
Query:   26 VRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTK---AQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSAGGKR 175
            VRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKN+ITAASFAQRLLELPDLSSERHADLR K   AQKVLQKSQQMARNEHTLDYDERNPFEVDCQ+LKPIYRG+PSCKCPYC SAY  SAKG+VCVTCGLSQ+GVETLGLVTTSSAGGKR
Sbjct:  740 VRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRLKVGLAQKVLQKSQQMARNEHTLDYDERNPFEVDCQSLKPIYRGTPSCKCPYCGSAYPLSAKGTVCVTCGLSQIGVETLGLVTTSSAGGKR 892          
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A835Z8J6_9STRA (Coatomer subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J6_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.080e-73
Identity = 128/171 (74.85%), Postives = 147/171 (85.96%), Query Frame = 0
Query:    1 QLLSICREYVTAIRIKAAVAETKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSA 171
            +LL I REYVTAIRIK A AE    VR+MEL AYFT CNLQPAHLLLALRMAM +AFK KN+ITAASFAQRLLELPDL+SER+A+LR KAQK+LQKSQQMARNE  LDYDERNPF +DC  LKPIYRG+P  KCPYC+S+Y P++  +VC TCG+SQVGVETLGLVTT+++
Sbjct: 1056 ELLDISREYVTAIRIKTASAEETAPVRSMELSAYFTHCNLQPAHLLLALRMAMGTAFKNKNFITAASFAQRLLELPDLASERNAELRDKAQKILQKSQQMARNEVDLDYDERNPFVIDCATLKPIYRGAPVVKCPYCSSSYSPASDKTVCQTCGISQVGVETLGLVTTTAS 1226          
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S2FV00_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV00_9STRA)

HSP 1 Score: 226 bits (576), Expect = 3.310e-71
Identity = 113/171 (66.08%), Postives = 135/171 (78.95%), Query Frame = 0
Query:    1 QLLSICREYVTAIRIKAAVAETKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSA 171
            +LL I REY+TAIR+K A+A+  D VR  EL AYFT CNLQPAHLLLAL+ AM S FK KNYITAASFA RLLELP++SSE++ADL+ KAQKV+ KS++  RNEHTL YDERNPF++DCQA  P+YRGSP  KC YC SAYQP     +C TCG++ +GVETLGL T  S+
Sbjct:  135 ELLDIAREYITAIRLKLAMADVSDPVRMTELWAYFTHCNLQPAHLLLALKSAMISGFKIKNYITAASFAHRLLELPEVSSEKNADLKGKAQKVILKSEKEGRNEHTLQYDERNPFDIDCQAFVPVYRGSPVVKCAYCGSAYQPECTNKLCTTCGIALIGVETLGLPTGRSS 305          
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S3YID5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YID5_HETAK)

HSP 1 Score: 224 bits (570), Expect = 3.340e-71
Identity = 115/172 (66.86%), Postives = 137/172 (79.65%), Query Frame = 0
Query:    1 QLLSICREYVTAIRIKAAVAET-KDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSA 171
            +++ ICREY+TAIR+K A+ E  +D  R MEL AYFT  NLQP HLLLALR+AMASAFK KN+ITAASFA+RLLELPD+SSE++ADL+ KAQKVLQKS+QM  NEH LDYDERNPF VD   L PIYRGSP   CP+CAS YQP     +C TC +SQ+GVET+GLV+  +A
Sbjct:   66 EMVEICREYITAIRLKVAIGECGEDPKRQMELGAYFTHQNLQPGHLLLALRLAMASAFKHKNFITAASFARRLLELPDISSEKNADLKLKAQKVLQKSEQMGSNEHALDYDERNPFAVDAADLVPIYRGSPEVTCPFCASHYQPRHANGLCATCNISQIGVETIGLVSQVAA 237          
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: W7TRK7_9STRA (Coatomer subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK7_9STRA)

HSP 1 Score: 231 bits (588), Expect = 5.710e-67
Identity = 117/174 (67.24%), Postives = 144/174 (82.76%), Query Frame = 0
Query:    1 QLLSICREYVTAIRIKAAVAE--TKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSAG 172
            +LL ICREY TAIRIK A+AE  +   VR +EL AYFT CNLQPAHLLLALRMAM SAFK +NYITAASFA RLLE+P+++SE++A+LR KAQKVLQKS+QMARNEH ++YD+R  F +DC+ L PI RG+P  KC YC S+Y P +KG +CVTCG+SQVG+ETLGLVT++ +G
Sbjct: 1097 ELLDICREYKTAIRIKNAIAELSSDQAVRQIELSAYFTHCNLQPAHLLLALRMAMVSAFKFQNYITAASFAHRLLEMPEMASEKNAELRLKAQKVLQKSEQMARNEHAIEYDDRQAFVIDCRTLLPIPRGAPCLKCSYCGSSYTPESKGVLCVTCGISQVGLETLGLVTSAGSG 1270          
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S3GXR2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXR2_9STRA)

HSP 1 Score: 214 bits (545), Expect = 2.650e-64
Identity = 105/172 (61.05%), Postives = 137/172 (79.65%), Query Frame = 0
Query:    1 QLLSICREYVTAIRIKAAV--AETKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSS 170
            +LL + REY+ A+R+K A+  A   D  R +EL AYFT CNLQP+HL+LAL+ AMASAFK KN+I AASFA+RLLELPD++SE++AD R+KAQKVLQKS+Q  RNE+T+DYDERNPF +DC  LKP+Y+G+P  KC YCA+ Y    KG +C+ CG+S VG++T+GLVT S+
Sbjct:  325 ELLDVSREYLIALRVKNAMGDASAADVGRGLELAAYFTHCNLQPSHLMLALKTAMASAFKNKNFINAASFARRLLELPDMNSEKNADSRSKAQKVLQKSEQQGRNEYTIDYDERNPFSLDCSTLKPLYKGTPLVKCSYCAACYAVDYKGKLCLICGISTVGLDTVGLVTQSA 496          
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S1UZE4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZE4_9STRA)

HSP 1 Score: 209 bits (531), Expect = 6.420e-64
Identity = 111/171 (64.91%), Postives = 132/171 (77.19%), Query Frame = 0
Query:    1 QLLSICREYVTAIRIKAAVAE-TKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSA-KGSVCVTCGLSQVGVETLGLVTTS 169
            ++L ICREY+TAIRIKAA++E TKD VR+ EL AYFT CNLQP HLLLALR AM +AFK KN+I AA FA+RLLELPD+SSER+ADLR KA KVLQKS+QMARN H L+YDE + F +DC+   PI  G+PS KC YC S Y  +  KG VC+TC    VG +T+GLVT S
Sbjct:  175 EMLEICREYITAIRIKAAMSENTKDPVRSTELSAYFTHCNLQPIHLLLALRSAMGTAFKHKNFIAAAGFARRLLELPDMSSERNADLRVKATKVLQKSEQMARNVHELNYDESSSFTIDCRDFVPIVAGTPSVKCSYCESTYADAGMKGKVCLTCTFCAVGTQTIGLVTGS 345          
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S1E1P1_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E1P1_9STRA)

HSP 1 Score: 200 bits (509), Expect = 7.090e-63
Identity = 107/171 (62.57%), Postives = 128/171 (74.85%), Query Frame = 0
Query:    1 QLLSICREYVTAIRIKAAVAET-KDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSA-KGSVCVTCGLSQVGVETLGLVTTS 169
            ++L ICREY+TAIRIK+A+A+  +D VR+ EL AYF+ CNLQP HLLLALR AM  AFK KNYI AA FA+RLLELPD++SER+ADLR KA KVLQKS+QMARNEH L YDE   F +DC+    I  G+ S KCPYC S Y+    K  VC TC  + VGV+T+GLVT S
Sbjct:    2 EMLEICREYITAIRIKSAMADVAQDPVRSTELAAYFSHCNLQPVHLLLALRSAMGVAFKHKNYIAAAGFARRLLELPDMNSERNADLRVKATKVLQKSEQMARNEHELAYDESTSFTIDCEKFTAIKAGTVSIKCPYCGSNYEGDGMKNKVCRTCSFATVGVQTIGLVTGS 172          
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S1Z9W7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z9W7_9STRA)

HSP 1 Score: 208 bits (530), Expect = 5.000e-62
Identity = 110/170 (64.71%), Postives = 129/170 (75.88%), Query Frame = 0
Query:    1 QLLSICREYVTAIRIKAAVAE-TKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTS 169
            ++L ICREY+TAIRIK A++    D VR+ EL AYFT CNLQP HLLLALR AM +AFK KN+I AASFA+RLLELPD++SER+ADLR KA KVLQKS+QMARNEHTL+Y E   F +DC+   PIY  + S KC YC S Y  S KG VC TC  S VGV+T+GLVT S
Sbjct:  337 EMLEICREYITAIRIKGAMSGCASDPVRSTELSAYFTHCNLQPIHLLLALRSAMGTAFKHKNFILAASFARRLLELPDMASERNADLRVKATKVLQKSEQMARNEHTLNYKENTTFYIDCKEFVPIYSEAESAKCSYCGSHYSESMKGMVCTTCTFSTVGVQTIGLVTGS 506          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL95_ECTSI4.990e-10093.71Coatomer subunit alpha n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KXQ0_9PHAE3.320e-8492.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8J6_9STRA1.080e-7374.85Coatomer subunit alpha n=1 Tax=Tribonema minus Tax... [more]
A0A7S2FV00_9STRA3.310e-7166.08Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3YID5_HETAK3.340e-7166.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TRK7_9STRA5.710e-6767.24Coatomer subunit alpha n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S3GXR2_9STRA2.650e-6461.05Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1UZE4_9STRA6.420e-6464.91Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1E1P1_9STRA7.090e-6362.57Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S1Z9W7_9STRA5.000e-6264.71Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010714Coatomer, alpha subunit, C-terminalPFAMPF06957COPI_Ccoord: 1..168
e-value: 1.5E-58
score: 198.5
NoneNo IPR availablePANTHERPTHR19876:SF1COATOMER SUBUNIT ALPHAcoord: 1..164
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 1..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1955contigL-elsbetiae_contig1955:217..1457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1955.5815.1mRNA_L-elsbetiae_contig1955.5815.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1955 217..1457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1955.5815.1 ID=prot_L-elsbetiae_contig1955.5815.1|Name=mRNA_L-elsbetiae_contig1955.5815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp
QLLSICREYVTAIRIKAAVAETKDTVRNMELLAYFTCCNLQPAHLLLALR
MAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQM
ARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVC
VTCGLSQVGVETLGLVTTSSAGGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010714Coatomer_asu_C