mRNA_L-elsbetiae_contig1955.5815.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: D8LL95_ECTSI (Coatomer subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL95_ECTSI) HSP 1 Score: 322 bits (826), Expect = 4.990e-100 Identity = 164/175 (93.71%), Postives = 170/175 (97.14%), Query Frame = 1 Query: 1 QLLSICREYVTAIRIKAAVAETKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSAGGKR 525 +LLSICREYVTAIRIKAAVAETKDTVR+MELLAYFTCCNLQPAHLLLALRMAMASAFKGKN+ITAASFAQRLLELPDLSSERHADLR KAQKVLQKSQQMARNEHTLDYDERNPFEVDCQ+LKPIYRG+PSCKCPYC SAY SAKG VCVTCGLSQ+GVETLGLVTTSSAGGKR Sbjct: 1084 ELLSICREYVTAIRIKAAVAETKDTVRSMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRIKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQSLKPIYRGTPSCKCPYCGSAYPLSAKGMVCVTCGLSQIGVETLGLVTTSSAGGKR 1258
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A6H5KXQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXQ0_9PHAE) HSP 1 Score: 275 bits (702), Expect = 3.320e-84 Identity = 141/153 (92.16%), Postives = 146/153 (95.42%), Query Frame = 1 Query: 76 VRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTK---AQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSAGGKR 525 VRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKN+ITAASFAQRLLELPDLSSERHADLR K AQKVLQKSQQMARNEHTLDYDERNPFEVDCQ+LKPIYRG+PSCKCPYC SAY SAKG+VCVTCGLSQ+GVETLGLVTTSSAGGKR Sbjct: 740 VRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRLKVGLAQKVLQKSQQMARNEHTLDYDERNPFEVDCQSLKPIYRGTPSCKCPYCGSAYPLSAKGTVCVTCGLSQIGVETLGLVTTSSAGGKR 892
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A835Z8J6_9STRA (Coatomer subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J6_9STRA) HSP 1 Score: 249 bits (637), Expect = 1.080e-73 Identity = 128/171 (74.85%), Postives = 147/171 (85.96%), Query Frame = 1 Query: 1 QLLSICREYVTAIRIKAAVAETKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSA 513 +LL I REYVTAIRIK A AE VR+MEL AYFT CNLQPAHLLLALRMAM +AFK KN+ITAASFAQRLLELPDL+SER+A+LR KAQK+LQKSQQMARNE LDYDERNPF +DC LKPIYRG+P KCPYC+S+Y P++ +VC TCG+SQVGVETLGLVTT+++ Sbjct: 1056 ELLDISREYVTAIRIKTASAEETAPVRSMELSAYFTHCNLQPAHLLLALRMAMGTAFKNKNFITAASFAQRLLELPDLASERNAELRDKAQKILQKSQQMARNEVDLDYDERNPFVIDCATLKPIYRGAPVVKCPYCSSSYSPASDKTVCQTCGISQVGVETLGLVTTTAS 1226
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S2FV00_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV00_9STRA) HSP 1 Score: 226 bits (576), Expect = 3.310e-71 Identity = 113/171 (66.08%), Postives = 135/171 (78.95%), Query Frame = 1 Query: 1 QLLSICREYVTAIRIKAAVAETKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSA 513 +LL I REY+TAIR+K A+A+ D VR EL AYFT CNLQPAHLLLAL+ AM S FK KNYITAASFA RLLELP++SSE++ADL+ KAQKV+ KS++ RNEHTL YDERNPF++DCQA P+YRGSP KC YC SAYQP +C TCG++ +GVETLGL T S+ Sbjct: 135 ELLDIAREYITAIRLKLAMADVSDPVRMTELWAYFTHCNLQPAHLLLALKSAMISGFKIKNYITAASFAHRLLELPEVSSEKNADLKGKAQKVILKSEKEGRNEHTLQYDERNPFDIDCQAFVPVYRGSPVVKCAYCGSAYQPECTNKLCTTCGIALIGVETLGLPTGRSS 305
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S3YID5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YID5_HETAK) HSP 1 Score: 224 bits (570), Expect = 3.340e-71 Identity = 115/172 (66.86%), Postives = 137/172 (79.65%), Query Frame = 1 Query: 1 QLLSICREYVTAIRIKAAVAET-KDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSA 513 +++ ICREY+TAIR+K A+ E +D R MEL AYFT NLQP HLLLALR+AMASAFK KN+ITAASFA+RLLELPD+SSE++ADL+ KAQKVLQKS+QM NEH LDYDERNPF VD L PIYRGSP CP+CAS YQP +C TC +SQ+GVET+GLV+ +A Sbjct: 66 EMVEICREYITAIRLKVAIGECGEDPKRQMELGAYFTHQNLQPGHLLLALRLAMASAFKHKNFITAASFARRLLELPDISSEKNADLKLKAQKVLQKSEQMGSNEHALDYDERNPFAVDAADLVPIYRGSPEVTCPFCASHYQPRHANGLCATCNISQIGVETIGLVSQVAA 237
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: W7TRK7_9STRA (Coatomer subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK7_9STRA) HSP 1 Score: 231 bits (588), Expect = 5.710e-67 Identity = 117/174 (67.24%), Postives = 144/174 (82.76%), Query Frame = 1 Query: 1 QLLSICREYVTAIRIKAAVAE--TKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSSAG 516 +LL ICREY TAIRIK A+AE + VR +EL AYFT CNLQPAHLLLALRMAM SAFK +NYITAASFA RLLE+P+++SE++A+LR KAQKVLQKS+QMARNEH ++YD+R F +DC+ L PI RG+P KC YC S+Y P +KG +CVTCG+SQVG+ETLGLVT++ +G Sbjct: 1097 ELLDICREYKTAIRIKNAIAELSSDQAVRQIELSAYFTHCNLQPAHLLLALRMAMVSAFKFQNYITAASFAHRLLEMPEMASEKNAELRLKAQKVLQKSEQMARNEHAIEYDDRQAFVIDCRTLLPIPRGAPCLKCSYCGSSYTPESKGVLCVTCGISQVGLETLGLVTSAGSG 1270
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S3GXR2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXR2_9STRA) HSP 1 Score: 214 bits (545), Expect = 2.650e-64 Identity = 105/172 (61.05%), Postives = 137/172 (79.65%), Query Frame = 1 Query: 1 QLLSICREYVTAIRIKAAV--AETKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTSS 510 +LL + REY+ A+R+K A+ A D R +EL AYFT CNLQP+HL+LAL+ AMASAFK KN+I AASFA+RLLELPD++SE++AD R+KAQKVLQKS+Q RNE+T+DYDERNPF +DC LKP+Y+G+P KC YCA+ Y KG +C+ CG+S VG++T+GLVT S+ Sbjct: 325 ELLDVSREYLIALRVKNAMGDASAADVGRGLELAAYFTHCNLQPSHLMLALKTAMASAFKNKNFINAASFARRLLELPDMNSEKNADSRSKAQKVLQKSEQQGRNEYTIDYDERNPFSLDCSTLKPLYKGTPLVKCSYCAACYAVDYKGKLCLICGISTVGLDTVGLVTQSA 496
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S1UZE4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZE4_9STRA) HSP 1 Score: 209 bits (531), Expect = 6.420e-64 Identity = 111/171 (64.91%), Postives = 132/171 (77.19%), Query Frame = 1 Query: 1 QLLSICREYVTAIRIKAAVAE-TKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSA-KGSVCVTCGLSQVGVETLGLVTTS 507 ++L ICREY+TAIRIKAA++E TKD VR+ EL AYFT CNLQP HLLLALR AM +AFK KN+I AA FA+RLLELPD+SSER+ADLR KA KVLQKS+QMARN H L+YDE + F +DC+ PI G+PS KC YC S Y + KG VC+TC VG +T+GLVT S Sbjct: 175 EMLEICREYITAIRIKAAMSENTKDPVRSTELSAYFTHCNLQPIHLLLALRSAMGTAFKHKNFIAAAGFARRLLELPDMSSERNADLRVKATKVLQKSEQMARNVHELNYDESSSFTIDCRDFVPIVAGTPSVKCSYCESTYADAGMKGKVCLTCTFCAVGTQTIGLVTGS 345
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S1E1P1_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E1P1_9STRA) HSP 1 Score: 200 bits (509), Expect = 7.090e-63 Identity = 107/171 (62.57%), Postives = 128/171 (74.85%), Query Frame = 1 Query: 1 QLLSICREYVTAIRIKAAVAET-KDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSA-KGSVCVTCGLSQVGVETLGLVTTS 507 ++L ICREY+TAIRIK+A+A+ +D VR+ EL AYF+ CNLQP HLLLALR AM AFK KNYI AA FA+RLLELPD++SER+ADLR KA KVLQKS+QMARNEH L YDE F +DC+ I G+ S KCPYC S Y+ K VC TC + VGV+T+GLVT S Sbjct: 2 EMLEICREYITAIRIKSAMADVAQDPVRSTELAAYFSHCNLQPVHLLLALRSAMGVAFKHKNYIAAAGFARRLLELPDMNSERNADLRVKATKVLQKSEQMARNEHELAYDESTSFTIDCEKFTAIKAGTVSIKCPYCGSNYEGDGMKNKVCRTCSFATVGVQTIGLVTGS 172
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Match: A0A7S1Z9W7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z9W7_9STRA) HSP 1 Score: 208 bits (530), Expect = 5.000e-62 Identity = 110/170 (64.71%), Postives = 129/170 (75.88%), Query Frame = 1 Query: 1 QLLSICREYVTAIRIKAAVAE-TKDTVRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNYITAASFAQRLLELPDLSSERHADLRTKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASAYQPSAKGSVCVTCGLSQVGVETLGLVTTS 507 ++L ICREY+TAIRIK A++ D VR+ EL AYFT CNLQP HLLLALR AM +AFK KN+I AASFA+RLLELPD++SER+ADLR KA KVLQKS+QMARNEHTL+Y E F +DC+ PIY + S KC YC S Y S KG VC TC S VGV+T+GLVT S Sbjct: 337 EMLEICREYITAIRIKGAMSGCASDPVRSTELSAYFTHCNLQPIHLLLALRSAMGTAFKHKNFILAASFARRLLELPDMASERNADLRVKATKVLQKSEQMARNEHTLNYKENTTFYIDCKEFVPIYSEAESAKCSYCGSHYSESMKGMVCTTCTFSTVGVQTIGLVTGS 506 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1955.5815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1955.5815.1 >prot_L-elsbetiae_contig1955.5815.1 ID=prot_L-elsbetiae_contig1955.5815.1|Name=mRNA_L-elsbetiae_contig1955.5815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp QLLSICREYVTAIRIKAAVAETKDTVRNMELLAYFTCCNLQPAHLLLALRback to top mRNA from alignment at L-elsbetiae_contig1955:217..1457+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1955.5815.1 ID=mRNA_L-elsbetiae_contig1955.5815.1|Name=mRNA_L-elsbetiae_contig1955.5815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1241bp|location=Sequence derived from alignment at L-elsbetiae_contig1955:217..1457+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1955:217..1457+ >mRNA_L-elsbetiae_contig1955.5815.1 ID=mRNA_L-elsbetiae_contig1955.5815.1|Name=mRNA_L-elsbetiae_contig1955.5815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1056bp|location=Sequence derived from alignment at L-elsbetiae_contig1955:217..1457+ (Laminarionema elsbetiae ELsaHSoW15)back to top |