prot_L-elsbetiae_contig195.5798.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig195.5798.1
Unique Nameprot_L-elsbetiae_contig195.5798.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length895
Homology
BLAST of mRNA_L-elsbetiae_contig195.5798.1 vs. uniprot
Match: D8LC09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC09_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 3.090e-158
Identity = 261/408 (63.97%), Postives = 298/408 (73.04%), Query Frame = 0
Query:    1 MIHSAMGRLVSLTAVFLG--QAGFASAAPTCTRVASQWAVVFPAECTTWFQQAEPRQGSVPESCIQGFTGALEVENFPWNDAVVVVDNESPGESFSLQPEQEVVKYGSGIVIMQTSWDLEGGVAWRPRMSSSAERIHSEVEYISSNQNSYLDFDLSVRYEPG-PSGRRRTRSLSVDGPEVDSDGNLDWVSFGDEASLDPSIALD-NRDGTYRPAFIYSYEQESYEXXXXXXXXDFDXXXXEFIDSMSEEGESSSHTFXXXXSHQFGEELEGRTPQPGAVQSVTSIDIYVCLDLENNLAELRFLCDPENDGDAQCFAEAGEANTQALAIHGMDMICAKECLPGQEGGVWCDIFGLDGCRMCTDDCTSICDGEAACSSCVNCREPTVAPSPSATDGSRGIPLETTSPTSA 404
            M+ SA GR  SL AV LG  QAG A AAPTC RVA QWAV+F AECT WFQQ   R+GS PESCIQ FT A+ VENFPWND VV+VDNE+PG+ FSLQPEQ V+K+G+GIVIMQTSWD+E G  W+PRMSSSAERI++EVEYI+S+ +SYLDFDLSVRYEP  P   R  R+LS D    D+    D     + ++  P +A D   D +Y PA++YSYE ESY+  XXX   D D    EFIDSM EE    S  +    S+ F  E E   P P AVQSVTS+DIYVC D +NNLAELRF CDPENDGDAQCFAEAGE N +AL IHGMDM C K CL GQEGG+WCDIFGLDGCRMCTDDCTSICDGEA+CSSC+ C  P V P PS TDGSRGIP+ + SPT A
Sbjct:    1 MMISATGRAASLAAVLLGLQQAGLAFAAPTCERVAGQWAVIFSAECTQWFQQIGSRRGSPPESCIQQFTSAVLVENFPWNDDVVIVDNETPGDDFSLQPEQPVLKFGAGIVIMQTSWDMEDGSLWQPRMSSSAERIYAEVEYIASDNHSYLDFDLSVRYEPEHPPPGRLMRALSEDNDAPDA---ADVEEILELSATPPPLAQDATGDLSYEPAYVYSYELESYDFSXXXELEDLDSYSYEFIDSMFEE---ESSPYSQTYSYNFRGEEEVSVPPPSAVQSVTSLDIYVCTDEDNNLAELRFNCDPENDGDAQCFAEAGEPNVRALHIHGMDMYCDKVCLAGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPRVPPPPSPTDGSRGIPIMSGSPTMA 402          
BLAST of mRNA_L-elsbetiae_contig195.5798.1 vs. uniprot
Match: A0A6H5JD92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD92_9PHAE)

HSP 1 Score: 439 bits (1129), Expect = 1.690e-132
Identity = 257/498 (51.61%), Postives = 297/498 (59.64%), Query Frame = 0
Query:    1 MIHSAMGRLVSLTAVFLG--QAGFASAAPTCTRVASQWAVVFPAECTTWFQQAEPRQGSVPESCIQG---------------FTGALEVENFPWNDAVVVVDNESPGESFSLQPEQEVVKYGSGIVIMQTSWDLEGGVAWRPRMSSSAERIHSEVEYISSNQNSYLDFDLSVRYEPG-PSGRRRTRSLSVDGPEVDSDGNLDWVSFGDEASLDPSIALD-NRDGTYRPAFIYSYEQESYEXXXXXXXXDFDXXXXEFIDSMSEEGESSSHTFXXXXSHQFGEELEGRTPQPGAVQSVTSIDIYVCLDLENNLAELRFLCDPENDGDAQCFAEAGEANTQALAIH---------------------------------------------------------------------------GMDMICAKECLPGQEGGVWCDIFGLDGCRMCTDDCTSICDGEAACSSCVNCREPTVAPSPSATDGSRGIPLETTSPTSA 404
            MI SA GR+  L AV LG  QAG A AAPTC RVASQWAV+F AECT WFQQ   R+GS PESCIQ                FT A+ VENFPWND VV+VDNE+PG+ FSLQPEQ V+K+G+GIVIMQTSWD+E G  W+PRMSSSAER+++EVEYI+S+ +SYLDFDLSVRYEP  P      R+LS D    D     D     + ++  P +A D N D +Y PA+IYSYE ESY+        D D    EFIDSM EE E S ++     + + GEE+    P P AVQSVTS+DIYVC D + NLAELRF CD ENDGDAQCFAEAGE N +AL IH                                                                           GMDM C K CLPGQEGG+WCDIFGLDGCRMCTDDCTSICDGEA+CSSC+ C  P   P+PS TDGSRGIP+ + SPT A
Sbjct:    1 MIMSATGRVAFLAAVLLGLQQAGLAFAAPTCERVASQWAVIFSAECTQWFQQIGSRRGSPPESCIQDPTWNHCMSNMRHDKQFTSAVLVENFPWNDDVVIVDNETPGDDFSLQPEQPVLKFGAGIVIMQTSWDMEDGSLWQPRMSSSAERVYAEVEYIASDNHSYLDFDLSVRYEPEHPPPGSLARALSEDDKAPDE---ADVEEILELSATPPPLAQDANGDLSYEPAYIYSYELESYDFSYNFELEDLDSYSYEFIDSMFEE-EISPYSQTYSYNFRGGEEVS--VPPPSAVQSVTSLDIYVCTDEDINLAELRFNCDLENDGDAQCFAEAGEPNVRALQIHVRMKKYIEFPRLKFWCDVVLLHLCLIFVISCVFYFLCVGSKCECEERHGTKLSHLDIRYRKSDTVTLAVTRQAQQGMDMYCDKVCLPGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPRAPPAPSPTDGSRGIPIMSGSPTMA 492          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig195.5798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC09_ECTSI3.090e-15863.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD92_9PHAE1.690e-13251.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..895
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.791

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig195contigL-elsbetiae_contig195:12249..20425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig195.5798.1mRNA_L-elsbetiae_contig195.5798.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig195 12249..20425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig195.5798.1 ID=prot_L-elsbetiae_contig195.5798.1|Name=mRNA_L-elsbetiae_contig195.5798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=895bp
MIHSAMGRLVSLTAVFLGQAGFASAAPTCTRVASQWAVVFPAECTTWFQQ
AEPRQGSVPESCIQGFTGALEVENFPWNDAVVVVDNESPGESFSLQPEQE
VVKYGSGIVIMQTSWDLEGGVAWRPRMSSSAERIHSEVEYISSNQNSYLD
FDLSVRYEPGPSGRRRTRSLSVDGPEVDSDGNLDWVSFGDEASLDPSIAL
DNRDGTYRPAFIYSYEQESYEFSYSFELEDFDSYSFEFIDSMSEEGESSS
HTFSYSFSHQFGEELEGRTPQPGAVQSVTSIDIYVCLDLENNLAELRFLC
DPENDGDAQCFAEAGEANTQALAIHGMDMICAKECLPGQEGGVWCDIFGL
DGCRMCTDDCTSICDGEAACSSCVNCREPTVAPSPSATDGSRGIPLETTS
PTSAAPTGADGSRGLPSFTSSPTEMMPSAAPTGTDGSRGLPSFTASPTEM
MPSAIETVAPSLMDGSMLPLDTGSPTEMTTPTAGLPSSTASPTGMMPSAA
PTGTDGSRGLPSSTASPTEMMPSAAPTGTDGSRGLPSSTASPTEMMPSAA
ETVAPSLMDGSMLPLDTASPTEIMTPTVGMPSFTASPTGMTPSAAPTGTD
GSRELPSSTASPTEMMSSAAPTGTDGSRGLPSFTASPTEMMPSAVETVAP
SLMDGSMLPLGTASPTEIMTPTVSPTGTDGSRGLPSSTASPTEMMSSAAP
TGTDGSRGLPSFTASPTEMMPSSAPTGTDGSRGLPSSTASPTEMMPSAVE
TVAPSLMDGSMLPLGTASPTEMTTPSASPTGTDGSRGLPIGTSSPTSMMS
SAAPTSTSSGGLPVETPAPSGTMSPTSSPTASATIDRGLNGDTPAPVVPL
SVSLETSSPTTAVAVETASPTSRSTGFETPSPSPGLRGFDTSSPT
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