prot_L-elsbetiae_contig195.5796.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig195.5796.1
Unique Nameprot_L-elsbetiae_contig195.5796.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length93
Homology
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: D8LC11_ECTSI (COX assembly mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC11_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 2.230e-50
Identity = 78/92 (84.78%), Postives = 87/92 (94.57%), Query Frame = 0
Query:    1 MSSVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELELDQDT 92
            M+++KDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGM+VVFSCR QN LMNSCLNQHTN ESF++YK ERE+EL ++T
Sbjct:    1 MATLKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMLVVFSCREQNALMNSCLNQHTNEESFDRYKFEREIELHRET 92          
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A8K1C5Z8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Z8_PYTOL)

HSP 1 Score: 104 bits (260), Expect = 2.100e-27
Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 0
Query:    3 SVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 88
            + K+  R+ RLSWS +AEH+LR+EL +IA+ +C D+  KFA CARE G+MV+F CR QNK MN CL+Q+TN E F  YK +RE E+
Sbjct:    9 TAKERFRSSRLSWSNQAEHKLRQELNDIAIAKCRDTTEKFAVCARESGLMVIFRCREQNKAMNDCLHQYTNDEQFRVYKEKREKEI 94          
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A3R7H0R3_9STRA (COX assembly mitochondrial protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H0R3_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.670e-24
Identity = 44/86 (51.16%), Postives = 64/86 (74.42%), Query Frame = 0
Query:    3 SVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 88
            + KD  R+ RLSWS +AEH+LR+EL +IA+ +C D  +KFA CA+  G+MV F CR  NK +N+CL+Q+T+AE F+ Y+ +RE E+
Sbjct:   10 TAKDTFRSSRLSWSNQAEHKLRQELSDIAIAKCRDISSKFAECAKANGLMVAFKCRQHNKDLNACLHQYTSAEQFDIYRQKREKEM 95          
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A5D6XX76_9STRA (COX assembly mitochondrial protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX76_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.360e-23
Identity = 43/86 (50.00%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    3 SVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 88
            + K+  R+ RLSWS +AEH+LR+EL +IA+ +C D  A FAACA+E+G++VVF CR  NK MN CL+Q T+ E F+ Y+ +R  ++
Sbjct:   16 TAKEHFRSSRLSWSNQAEHKLRQELNDIAIAKCRDVTASFAACAQEQGLLVVFKCRALNKAMNDCLHQFTSDEQFQAYRDKRSKDV 101          
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: W2NEW3_PHYPR (COX assembly mitochondrial protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2NEW3_PHYPR)

HSP 1 Score: 91.7 bits (226), Expect = 3.480e-22
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    9 RNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 88
            R+ RLSWS +AEH+L++EL +IA+ +C     KFA CA+  G+MV F CR  NK +N+CL+Q+TN E FE Y+  RE E+
Sbjct:   15 RSSRLSWSNQAEHKLKQELSDIAIAKCRSVSEKFAECAKANGLMVAFKCRDHNKALNACLHQYTNDEQFEIYRKRREKEM 94          
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A484E0L3_BRELC (COX assembly mitochondrial protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0L3_BRELC)

HSP 1 Score: 90.5 bits (223), Expect = 8.890e-22
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    3 SVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 88
            + K   R+ RLSWS +AEH+L+++L +IA+ +C     +FA CAR  G M++F CR QNK +N+CL+Q+TN E FE ++  RE E+
Sbjct:    9 TAKAAFRSSRLSWSNQAEHKLKQQLSDIAIAKCRSVSEQFADCARANGFMIIFKCREQNKALNACLHQYTNDEQFELFRKRREKEM 94          
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A3M6VM01_9STRA (COX assembly mitochondrial protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VM01_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.560e-21
Identity = 39/77 (50.65%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    9 RNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERE 85
            R+ RLSWS +AEH+L++EL +IA+ +C     KFA CA+  G++VVF C+  NK +N+CL+Q+TN E FE Y+ +RE
Sbjct:   15 RSSRLSWSNQAEHKLKQELSDIAIAKCHSVAEKFAECAKANGLLVVFKCQDHNKALNACLHQYTNDEQFEIYRQKRE 91          
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: H3GT38_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GT38_PHYRM)

HSP 1 Score: 95.5 bits (236), Expect = 6.190e-21
Identity = 44/86 (51.16%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    3 SVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 88
            + K+  R+ RLSWS +AEH+LR+EL +IA+ +C +   KFA CA+  G+MVVF CR  N+ +N+CL+Q+TNAE FE Y+  RE E+
Sbjct:  711 TAKNKFRSSRLSWSNQAEHKLRQELSDIAIAKCRNVSEKFAECAKANGLMVVFKCRENNRELNACLHQYTNAEQFEIYRQRREKEM 796          
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A2P4XLT2_9STRA (Alpha-N-acetylglucosaminidase (NAGLU) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLT2_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 8.480e-21
Identity = 42/80 (52.50%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    9 RNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 88
            R+ RLSWS +AEH+L++EL +IA+ +C     KFA CA+  G+MVVF CR  NK +N+CL+Q+TN E FE Y+ +RE E+
Sbjct:  776 RSSRLSWSNQAEHKLKQELSDIAISKCHSVAEKFAECAKANGLMVVFKCRDHNKALNACLHQYTNDEQFEIYRQKREKEI 855          
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: K3X183_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X183_GLOUD)

HSP 1 Score: 95.1 bits (235), Expect = 8.500e-21
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    3 SVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 88
            + K+  R+ RLSWS +AEH+LR+EL +IA+ +C     KFA CA+E+G+MVV  CR QNK MN+CL+++TN E F+ Y+  R  E+
Sbjct:  817 TAKENFRSSRLSWSNQAEHKLRQELNDIAIAKCRSITEKFAECAKEQGLMVVVRCREQNKAMNACLHEYTNPEQFQLYRERRSKEV 902          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LC11_ECTSI2.230e-5084.78COX assembly mitochondrial protein n=2 Tax=Ectocar... [more]
A0A8K1C5Z8_PYTOL2.100e-2755.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7H0R3_9STRA3.670e-2451.16COX assembly mitochondrial protein n=3 Tax=Phytoph... [more]
A0A5D6XX76_9STRA2.360e-2350.00COX assembly mitochondrial protein n=1 Tax=Pythium... [more]
W2NEW3_PHYPR3.480e-2251.25COX assembly mitochondrial protein n=7 Tax=Phytoph... [more]
A0A484E0L3_BRELC8.890e-2246.51COX assembly mitochondrial protein n=1 Tax=Bremia ... [more]
A0A3M6VM01_9STRA2.560e-2150.65COX assembly mitochondrial protein n=4 Tax=Peronos... [more]
H3GT38_PHYRM6.190e-2151.16Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2P4XLT2_9STRA8.480e-2152.50Alpha-N-acetylglucosaminidase (NAGLU) n=2 Tax=Phyt... [more]
K3X183_GLOUD8.500e-2150.00Uncharacterized protein n=2 Tax=Globisporangium ul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePFAMPF08583Cmc1coord: 23..85
e-value: 8.5E-14
score: 51.3
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePANTHERPTHR22977COX ASSEMBLY MITOCHONDRIAL PROTEINcoord: 9..83
NoneNo IPR availablePANTHERPTHR22977:SF5COX ASSEMBLY MITOCHONDRIAL PROTEIN HOMOLOGcoord: 9..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig195contigL-elsbetiae_contig195:3487..4731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig195.5796.1mRNA_L-elsbetiae_contig195.5796.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig195 3233..5692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig195.5796.1 ID=prot_L-elsbetiae_contig195.5796.1|Name=mRNA_L-elsbetiae_contig195.5796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp
MSSVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKG
MMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELELDQDT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013892Cyt_c_biogenesis_Cmc1-like