prot_L-elsbetiae_contig1948.5787.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1948.5787.1
Unique Nameprot_L-elsbetiae_contig1948.5787.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length232
Homology
BLAST of mRNA_L-elsbetiae_contig1948.5787.1 vs. uniprot
Match: D7FW96_ECTSI (Ankyrin, TRAF-type zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW96_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 3.920e-48
Identity = 135/261 (51.72%), Postives = 158/261 (60.54%), Query Frame = 0
Query:    1 ASLAVDLARRRKIRREAARXXXXXXXXXXGAGDRNRGNQAASAMRPGPRLAAISSRSFEAMQSRALRLFQRSVSRFQVLTEDDFRRAADLNLLPD--------------GADEGAAGRGGD---------AGDVGGGD------VVEDQEQARNPTPSLSAPSPSPSSGRRPSRGSNKGEAGGSSDGAGRVGGKTTASRPSSAAAVPAAAAAILRVLRATVLVLGGCGLGALPSDKDLWDAVRPMLSDGSLRHRLRHFDRR 232
            ASL  DLARRRKI+REAA+          G   RN  NQ A +      +A ISSRSF+AMQSRALRLFQRSVSRFQ LTEDDF+R ADLNLLP+              G +EG A +  D         A  V  GD      + E++E  RNPTPSLS          + S G ++    GS   AG +G K      S  +A   AAA +LRV+RATVLVLGGCGLGALPSDK+LW+AV+PMLSDGSLRHR+RHFDRR
Sbjct:  558 ASLTKDLARRRKIQREAAKSTRA------GTRGRNLENQLAVSTTRSSGVAVISSRSFQAMQSRALRLFQRSVSRFQALTEDDFKRVADLNLLPEDVGVRKVAVDKAEEGENEGEALKKADSKAEVDEEAAPTVQEGDREEHAGIAEEKEAGRNPTPSLSXXXXXXXXXXQLSLGQSRS---GSDAEAGELGVKEVNPALSPPSATAPAAAVVLRVVRATVLVLGGCGLGALPSDKELWEAVKPMLSDGSLRHRVRHFDRR 809          
BLAST of mRNA_L-elsbetiae_contig1948.5787.1 vs. uniprot
Match: A0A6H5L2H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H6_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 5.220e-48
Identity = 140/262 (53.44%), Postives = 163/262 (62.21%), Query Frame = 0
Query:    1 ASLAVDLARRRKIRREAARXXXXXXXXXXGAGDRNRGNQ-AASAMRPGPRLAAISSRSFEAMQSRALRLFQRSVSRFQVLTEDDFRRAADLNLLPD--------------GADEGAAGRGGDA-GDVGG--------GD------VVEDQEQARNPTPSLSAPSPSPSSGRRPSRGSNKGEAGGSSDGAGRVGGKTTASRPSSAAAVPAAAAAILRVLRATVLVLGGCGLGALPSDKDLWDAVRPMLSDGSLRHRLRHFDRR 232
            ASL  DLARR KI+REAA+          G   RN  NQ A S  RP   +AAISS+SF+AMQSRALRLFQRSVSRFQVLTEDDF+R ADLNL P+              G +EG A +  D+  +V G        GD      + E++E  RNPTPSLSA +      RR      +  +G  +D AG +G K      S  A    AAAA+LRV+RATVLVLGGCGLGALPSDKDLW AV+PMLSDGSLRHR+RHFDRR
Sbjct: 1022 ASLTKDLARRCKIQREAAKSTRA------GTRGRNLENQLAVSTTRPSG-VAAISSQSFQAMQSRALRLFQRSVSRFQVLTEDDFKRVADLNLFPEDVGVRKMAVDKAEGGKNEGEALKKADSKAEVDGEAVPTVQEGDREEHAGIAEEKEAGRNPTPSLSAATSXXXXSRRQLT-LGQSHSGNDAD-AGELGVKEVNPASSPPATTIPAAAAVLRVVRATVLVLGGCGLGALPSDKDLWKAVKPMLSDGSLRHRVRHFDRR 1274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1948.5787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW96_ECTSI3.920e-4851.72Ankyrin, TRAF-type zinc finger protein n=1 Tax=Ect... [more]
A0A6H5L2H6_9PHAE5.220e-4853.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1948contigL-elsbetiae_contig1948:19890..20618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1948.5787.1mRNA_L-elsbetiae_contig1948.5787.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1948 19890..20618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1948.5787.1 ID=prot_L-elsbetiae_contig1948.5787.1|Name=mRNA_L-elsbetiae_contig1948.5787.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
ASLAVDLARRRKIRREAARAARAARAAGAGAGDRNRGNQAASAMRPGPRL
AAISSRSFEAMQSRALRLFQRSVSRFQVLTEDDFRRAADLNLLPDGADEG
AAGRGGDAGDVGGGDVVEDQEQARNPTPSLSAPSPSPSSGRRPSRGSNKG
EAGGSSDGAGRVGGKTTASRPSSAAAVPAAAAAILRVLRATVLVLGGCGL
GALPSDKDLWDAVRPMLSDGSLRHRLRHFDRR
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