prot_L-elsbetiae_contig19437.5772.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19437.5772.1
Unique Nameprot_L-elsbetiae_contig19437.5772.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length156
Homology
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BLAST of mRNA_L-elsbetiae_contig19437.5772.1 vs. uniprot
Match: D8LST8_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST8_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.080e-42
Identity = 92/153 (60.13%), Postives = 99/153 (64.71%), Query Frame = 0 
Query:   10 CNFDLWKVLTGSQAIRQADLRAGFGVAAVGGKAAERLEPKEVAELVRVSPRPMEIVFRDPELLGRRLQAEADRKAEEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------SSRELRVTQAGKKPAVCGTKTKAGDLIEFR 156
            C   + +VLTGSQAIRQA+LRAGFGVAAVGGK AERLEPKEVAEL+R+SPRPMEIVFRDPELLGRRLQAEADRKAE  +                                            SS ELRVTQ GKKP VCGT+TKAGDLIEFR
Sbjct:  201 CRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKPAERLEPKEVAELIRLSPRPMEIVFRDPELLGRRLQAEADRKAEAVKRRKQKAAADAASPETAAPDTGDSATATTAVDPRSGSVGNGGGSASSGELRVTQVGKKPEVCGTRTKAGDLIEFR 353
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19437.5772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LST8_ECTSI1.080e-4260.13Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19437contigL-elsbetiae_contig19437:700..2491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19437.5772.1mRNA_L-elsbetiae_contig19437.5772.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19437 700..2491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19437.5772.1 ID=prot_L-elsbetiae_contig19437.5772.1|Name=mRNA_L-elsbetiae_contig19437.5772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
MPPPPTPSQCNFDLWKVLTGSQAIRQADLRAGFGVAAVGGKAAERLEPKE
VAELVRVSPRPMEIVFRDPELLGRRLQAEADRKAEEARRRKRKAADEAAS
PETAASATDPRSGSSVGDGGGGSGGGSSRELRVTQAGKKPAVCGTKTKAG
DLIEFR
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