prot_L-elsbetiae_contig19247.5694.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19247.5694.1
Unique Nameprot_L-elsbetiae_contig19247.5694.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length62
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig19247.5694.1 vs. uniprot
Match: A0A6H5KG45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG45_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.720e-26
Identity = 50/57 (87.72%), Postives = 53/57 (92.98%), Query Frame = 0 
Query:    1 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAESYRHEYAPLSCNIWFLPRPRLVEV 57
            +EVDVVFEEDVGFLGALRDLRR AKCPV+LTAE+YR EYAPLSCNIW LPRPRL EV
Sbjct:   17 EEVDVVFEEDVGFLGALRDLRRAAKCPVILTAETYRREYAPLSCNIWHLPRPRLAEV 73
[Close]
BLAST of mRNA_L-elsbetiae_contig19247.5694.1 vs. uniprot
Match: D7FH97_ECTSI (Similar to chromosome fragility associated gene 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH97_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 4.380e-26
Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 0 
Query:    1 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAESYRHEYAPLSCNIWFLPRPRLVEV 57
            +EVDVVFEEDVGFLGALRDLRR AKCPV+LTAE+YR EYAPLSCNIW LPRPRL E+
Sbjct: 1025 EEVDVVFEEDVGFLGALRDLRRAAKCPVILTAETYRREYAPLSCNIWHLPRPRLAEL 1081
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19247.5694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG45_9PHAE1.720e-2687.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH97_ECTSI4.380e-2685.96Similar to chromosome fragility associated gene 1 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19247contigL-elsbetiae_contig19247:1281..1466 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19247.5694.1mRNA_L-elsbetiae_contig19247.5694.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19247 1281..1466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19247.5694.1 ID=prot_L-elsbetiae_contig19247.5694.1|Name=mRNA_L-elsbetiae_contig19247.5694.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=62bp
QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAESYRHEYAPLSCNIWFLP
RPRLVEVCANI*
back to top