prot_L-elsbetiae_contig19213.5681.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19213.5681.1
Unique Nameprot_L-elsbetiae_contig19213.5681.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length135
Homology
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BLAST of mRNA_L-elsbetiae_contig19213.5681.1 vs. uniprot
Match: D7FJ86_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ86_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 4.220e-39
Identity = 91/147 (61.90%), Postives = 99/147 (67.35%), Query Frame = 0 
Query:    1 DDRHDRCLLPGDSGTHSVTDSYDLNSFGSYVDSDEENHEVGLSIDGDEDDEDRDG-----VLEAPSHSSSLPPTATPPPEILLGFGSAHGAAAFSLHGGSXXXXXXXXXAHGRGGGTEALAVGGG----------LAISRHRWSAGR 132
            DDRHD+CLLPGDSGTHSVTDSYDLNSFGS+VDSDE++HEVGLSIDGDE+DE RDG      ++  S   SLP T T PPEILLGFGSAHGAAAFSLHGGS          HG   G+                  LA SRHRWSA R
Sbjct:  560 DDRHDQCLLPGDSGTHSVTDSYDLNSFGSFVDSDEDSHEVGLSIDGDEEDEPRDGXXXXXAIDGSSFHESLPATTTEPPEILLGFGSAHGAAAFSLHGGSGSG-------HGLCHGSXXXXXXXXXXXXXXXXXXLATSRHRWSAER 699
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19213.5681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJ86_ECTSI4.220e-3961.90RING-type domain-containing protein n=2 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19213contigL-elsbetiae_contig19213:849..1831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19213.5681.1mRNA_L-elsbetiae_contig19213.5681.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19213 849..1832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19213.5681.1 ID=prot_L-elsbetiae_contig19213.5681.1|Name=mRNA_L-elsbetiae_contig19213.5681.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp
DDRHDRCLLPGDSGTHSVTDSYDLNSFGSYVDSDEENHEVGLSIDGDEDD
EDRDGVLEAPSHSSSLPPTATPPPEILLGFGSAHGAAAFSLHGGSGGSGG
SGGSAHGRGGGTEALAVGGGLAISRHRWSAGRNAG
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