prot_L-elsbetiae_contig19206.5676.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19206.5676.1
Unique Nameprot_L-elsbetiae_contig19206.5676.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length256
Homology
BLAST of mRNA_L-elsbetiae_contig19206.5676.1 vs. uniprot
Match: D8LE30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE30_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.270e-14
Identity = 98/299 (32.78%), Postives = 133/299 (44.48%), Query Frame = 0
Query:   25 PELMID---TSQKEGQADLLLSGAGHH------AESSAQDEPVRASGGVSNELAYLDARAHTLLEHCRQLLAPSSTPS-DQV-SIPSSA----------------DLEERAWTLF----------TYYKR------SDRPCVLEAPSNPLSFPNVVKASTGEDPALSS---------GG----SFGERGNTDPFQQEHGHQ---SGDGRHVDKVNLALETDKCLTLMTSLLHDGYQTGDESKHAPTLFSS----------VSARSGAEKWTDWLRDDPVLSALLRRFGEIETEIERRHS 254
            PEL+ D   T++ E  AD  +   G H      AES  QD+ + A     +EL  LD RA TLLE CRQ+LAPSST + DQV S  SSA                +LE+RAW L           TY +       S +P  L+   +      +V+   GED   ++         GG     FGER       QE G Q   S D  ++  VN+    D    +  ++    Y   + + ++P L SS          ++   G E   DW R DPVLSALLRR  E+ETE++RR +
Sbjct:  148 PELVNDRLATAEVEA-ADTNVDETGVHVSIGLDAESLVQDKSINACDRGGDELETLDVRARTLLEECRQVLAPSSTITLDQVRSFTSSASQSNGPIIAALDNLPEELEKRAWMLLNNCEEPPLLPTYNEEVLAVPCSSKPPALDTQGD------LVRL--GEDDGKTAKVLLRRNPPGGVVARPFGEREGAYHLDQERGWQPTCSSDVGNLGDVNV----DSIGRVFPTITDSRYSNNERTWYSPALDSSGVQERMSSMTLATTPGEE---DWFRRDPVLSALLRRHDEVETELKRRRA 430          
BLAST of mRNA_L-elsbetiae_contig19206.5676.1 vs. uniprot
Match: A0A6H5J9P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P1_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.690e-12
Identity = 82/264 (31.06%), Postives = 116/264 (43.94%), Query Frame = 0
Query:   46 GHHAESSAQDEPVRASGGVSNELAYLDARAHTLLEHCRQLLAPSSTPS-DQV-SIPSSA----------------DLEERAWTLFTYYKR----------------SDRPCVLEAPSNPLSFPN----VVKASTGEDPALSSGGS----FGERGNTDPFQQEHGHQS---GDGRHVDKVNLALETDKCLTLMTSLLHDGYQTGDESKHAPTLFSS----------VSARSGAEKWTDWLRDDPVLSALLRRFGEIETEIERRHS 254
            G HAE+   ++ + A  G  +EL  LDARA TLL+ CRQ+LAPSST + D+V S   SA                +LE+RAW L  + +                 S +P  ++A  + +          K     +P    GG+     GER       Q  G QS    D R++  VN+      C T+  S     +   + + ++P L SS          V+   G E   DW R DPVLSALLRR  E+E E++RR +
Sbjct:  179 GLHAENLVLNKSINARDGGGDELQTLDARARTLLQECRQVLAPSSTITLDEVASFTYSASQSNGPIIAALDDLPEELEKRAWMLLNHCEEPPLLPAYNEEVLAVPCSSKPPAIDAQGDLVRLGKYDGKTAKVLLRRNPP---GGAVARPLGEREGAYHLDQGRGCQSRCSSDVRNLRDVNIDSIGRVCSTIAESR----HSNRERTWYSPALDSSGVQERMSSMTVATTPGEE---DWFRQDPVLSALLRRHDEVEAELKRRRA 432          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19206.5676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE30_ECTSI1.270e-1432.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9P1_9PHAE1.690e-1231.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19206contigL-elsbetiae_contig19206:1025..2186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19206.5676.1mRNA_L-elsbetiae_contig19206.5676.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19206 469..2350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19206.5676.1 ID=prot_L-elsbetiae_contig19206.5676.1|Name=mRNA_L-elsbetiae_contig19206.5676.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=256bp
MSNQTSPLDHPLCDVSPRQPAEGEPELMIDTSQKEGQADLLLSGAGHHAE
SSAQDEPVRASGGVSNELAYLDARAHTLLEHCRQLLAPSSTPSDQVSIPS
SADLEERAWTLFTYYKRSDRPCVLEAPSNPLSFPNVVKASTGEDPALSSG
GSFGERGNTDPFQQEHGHQSGDGRHVDKVNLALETDKCLTLMTSLLHDGY
QTGDESKHAPTLFSSVSARSGAEKWTDWLRDDPVLSALLRRFGEIETEIE
RRHSS*
back to top