prot_L-elsbetiae_contig19195.5668.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19195.5668.1
Unique Nameprot_L-elsbetiae_contig19195.5668.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length245
Homology
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BLAST of mRNA_L-elsbetiae_contig19195.5668.1 vs. uniprot
Match: A0A6H5JXU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU8_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.350e-5
Identity = 38/131 (29.01%), Postives = 64/131 (48.85%), Query Frame = 0 
Query:   22 YGSFKSSAPLATREDMEHRM---EAMMIGAGYSSVLAVHTHVVTEGLRGCDQDLLIELV--STEFTTKPVKMTVRISQGNTCVGPGGSRTFMSDKLTHCMHNIEYSFVDGEVTTVSRVLIPGRVPLSFAFP 147
            YG +  S+P     D+   +      + G G  +   VH  VV  GLRGCD+  ++++V  + +    P+ + +R     T   PG     +S+      H     F+DG +TTV+++ I GR+PL +A+P
Sbjct:   10 YGDWPGSSPPERNTDLRDLLLWQHVFLAGLGMKT--HVHVAVVEAGLRGCDETCMMDVVFGTPKKEGDPLPILLRWEFCPTQNTPG----VVSEPTLAVWHETAPCFLDGVMTTVTKIAIRGRIPLEWAWP 134
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19195.5668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JXU8_9PHAE1.350e-529.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19195contigL-elsbetiae_contig19195:553..2041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19195.5668.1mRNA_L-elsbetiae_contig19195.5668.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19195 548..2550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19195.5668.1 ID=prot_L-elsbetiae_contig19195.5668.1|Name=mRNA_L-elsbetiae_contig19195.5668.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=245bp
MAMGRRQVGDGAENVGVQNKVYGSFKSSAPLATREDMEHRMEAMMIGAGY
SSVLAVHTHVVTEGLRGCDQDLLIELVSTEFTTKPVKMTVRISQGNTCVG
PGGSRTFMSDKLTHCMHNIEYSFVDGEVTTVSRVLIPGRVPLSFAFPLLA
GSPSMGVDASASGDSPSASASFIRLVRPAPRHIVLRAIHRYSRKGHIAMT
DEPDQVKSAIYSNDVELRRRMWLKYAETFNRPTAKEFKNWFLDL*
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