prot_L-elsbetiae_contig1914.5648.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1914.5648.1
Unique Nameprot_L-elsbetiae_contig1914.5648.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length719
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1914.5648.1 vs. uniprot
Match: D8LGX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGX5_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 5.820e-82
Identity = 187/256 (73.05%), Postives = 208/256 (81.25%), Query Frame = 0 
Query:  444 IQALEDQLSYLEEDRRRVLLAAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAVVETVRAETAKALEQAQQGTQAAAVKAAEEVKRARGELDAAQALLEEALRDKAAAVQEKAASDALLRTEQGKGAALEKEVERLRESTVALTQRLLDTVAEAERAGKDERDAIQARAHEATEAAVXXXXXXXREEETARCREEMEVALAEEKEELRKXMEARVATMRAGLKRRLQEARAERAGTASGIPSSERVAGV 699
            I ALE+QL+YLEEDRRR  L+AKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETA++E VRAET KAL+Q    T AAA  A EEV++AR EL+AAQALLEEAL++KA AVQEKAA DALLRTEQGK AALEKEVERL+EST  LTQRLLD VA+AERA ++ERDA  A+A  A     XXXXX  REEETARCREE   ALAEEKE+LRK ME R+ATMRAGLKRRLQEAR+ER GT   +       G+
Sbjct:  339 ILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAMLEAVRAETTKALKQGSHATAAAAAAADEEVRQARAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVERLKESTATLTQRLLDAVAKAERADEEERDAATAKAV-AERXXXXXXXXAAREEETARCREEFYSALAEEKEKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGSVSGRPMSGGI 593
[Close]
BLAST of mRNA_L-elsbetiae_contig1914.5648.1 vs. uniprot
Match: A0A6H5KQY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY4_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 9.690e-80
Identity = 181/247 (73.28%), Postives = 204/247 (82.59%), Query Frame = 0 
Query:  444 IQALEDQLSYLEEDRRRVLLAAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAVVETVRAETAKALEQAQQGTQAAAVKAAEEVKRARGELDAAQALLEEALRDKAAAVQEKAASDALLRTEQGKGAALEKEVERLRESTVALTQRLLDTVAEAERAGKDERDAIQARAHEATEAAVXXXXXXXREEETARCREEMEVALAEEKEELRKXMEARVATMRAGLKRRLQEARAERAGTASGI 690
            I ALE+QL+YLEEDRRR  L+AKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQES+TA++E VRAETAKAL+Q    T AAA  A EEV++ R EL+AAQALLEEAL++KA AVQEKAA DALLRTEQGK AALEKEV RL+EST  LTQRLLD VA+AERA ++ERDA  A+A  A    +   XXX REEETARCREE   ALAEEK++LRK ME R+ATMRAGLKRRLQEAR+ER GT   +
Sbjct:  343 ILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESKTAMLEVVRAETAKALKQGSHATAAAAEAANEEVRQVRAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVVRLKESTATLTQRLLDAVAKAERADEEERDAATAKAV-AEREEIETAXXXAREEETARCREEFYSALAEEKKKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGSV 588
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1914.5648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGX5_ECTSI5.820e-8273.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQY4_9PHAE9.690e-8073.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 569..589
NoneNo IPR availableCOILSCoilCoilcoord: 430..464
NoneNo IPR availableCOILSCoilCoilcoord: 483..503
NoneNo IPR availableCOILSCoilCoilcoord: 527..561
NoneNo IPR availableCOILSCoilCoilcoord: 643..663
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 381..718
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 360..380
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..359
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1914contigL-elsbetiae_contig1914:5893..19554 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1914.5648.1mRNA_L-elsbetiae_contig1914.5648.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1914 5584..19554 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1914.5648.1 ID=prot_L-elsbetiae_contig1914.5648.1|Name=mRNA_L-elsbetiae_contig1914.5648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=719bp
MRGQCGIAVVAATLATGKSTTPSRDAVAAPPHHVVSTRGSPAPSALEAAI
AVGSRGVAPPPTGSRDGKPLLRVLPKGSWSARQEGSCADATPCCAGVLPT
RARRVRRRGFLGPTAARDAAGGDAGRADRSRGAGSSSAGARAADAGDMHN
DVLLVRGGGGTSWFRSEYDEFPPDFDYEPTEDGNDDDGGGDDDDDGSAAF
CWPEDDEDPAGSASAAAGSISSKKKKLDLKDFLEEEDGALIMKRKDLPDL
DGVQQGRSRRPDRKTLPPAEGGPASPPVPAVKRCVLILPPRPFAPSRLTP
RHPPPPPHSPAASAPPRFPVSAENHGNWVPSSALTAAAATAPERVANANG
SWDRNRVGGMLLPLGAVVGALAGAVGLRLWEVLVHRYRRSGGGDSGGGDS
GGGDGGGKSVTEGGVGGEEGGGQIEGTAVAAEAAEAVGAQQAKIQALEDQ
LSYLEEDRRRVLLAAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQES
ETAVVETVRAETAKALEQAQQGTQAAAVKAAEEVKRARGELDAAQALLEE
ALRDKAAAVQEKAASDALLRTEQGKGAALEKEVERLRESTVALTQRLLDT
VAEAERAGKDERDAIQARAHEATEAAVAAAAAAAREEETARCREEMEVAL
AEEKEELRKQMEARVATMRAGLKRRLQEARAERAGTASGIPSSERVAGVA
GSSSSSNSGSSSSSSRPK*
back to top