prot_L-elsbetiae_contig1912.5643.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1912.5643.1
Unique Nameprot_L-elsbetiae_contig1912.5643.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length745
Homology
BLAST of mRNA_L-elsbetiae_contig1912.5643.1 vs. uniprot
Match: D8LSX8_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX8_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 2.160e-69
Identity = 262/753 (34.79%), Postives = 370/753 (49.14%), Query Frame = 0
Query:    3 EIMRRISLVDRRVMEQDNDFADSRIISSRVEGMISALQGRQVETRLLTLENDTSDLNDSLG-QAATRELSAGIAASVEKALAAEMQRTQTSIEQVKQLELTVESMGRRLATGGADEMARIRREIQNNEGALHRRIEEVQALDLRRMDELSRDLLREKENRISGLKEVSEEVSNVRVSLLHSDQRSHGQIHERLDRIERCTSKVDDDNAKTKSFVFSISAQLKQMQLQVQDARDIRMRADKLPGEGYQERQPLAVADGRMSPLS----QLAPVLPQTPSSALSRPLPHTAVGSDIEASPGSGREREGAHANFGNTGAEITRTSTQRGRVEVCNTGAVAGLVCDLPPTSAETSSFNSSQPVPGRIPSTATAASAQANRDCGNRQNRIEGKPPTIENRLADPSEREIGSNGGAGNGSDNTSKPDPTSVRFGSLLVEGTSHTTPLPRGIEEPRREEVPQTSPKASMEHLRKAALATVSLSAQEDE------EDAGIARGN----GVDQATENRSRSAFAESEPSS-----SXXXXXHSPSSPCRFFPRKG-VGVPEADTARVQPTTQGPTPSGDTKPSTLEPVRNYLSSGTHGDATDTEEAAGNVVLSNRAAAPSKDLETVERESDSSFSVEDERA----------GETPVETDRGRQPGGALSLSATTLKTSSYDSSVGK-SNVAGGKRTXXXXXXXXXXXXXXXXXXXXXXRSASWNTRRKSLEGCNTGPAPVSFRERSASKASRHTSKSTCFCL 723
            E ++R++LV+RR+ EQDND  + R+  S+ EG ++ALQ RQVE RL  LE+D S L  SLG +  T+ELS  IA ++  AL AEMQR+Q   +Q++ +ELT  S+ R L  G   E ARIRRE+Q++EG+L RRIEEV+A DLRRM+E+S ++LRE+ NR+    EV +EVSN+R SL  ++   HG+IH+RLDR+E   +    D++ T+S V SI +QLKQ+QL++Q+ARD   R  +   + ++E   LA+ DG   P+     Q A   PQT +S L+   P TA+    E  P    E++GA      TG+  T  +T+ G          A   CD  PT    SS      +PGR+ +TA A + Q N D  +    ++    ++ +  + P E    S G   N   +   P P     G    E     T  P         +V  TS   S + LRK+ALA VS SA+ED       E+AG  R +    G        S S+   S PS      S     H+PS      P+ G  G  E   A   P       + D   S  + + + L +   G   DTE A G+ V  +R A  +K   +    SDSSFSV+D+ A           ET    D   +PG   + + T+ +++   S  G   +V+                                 TRRKS+   +TGPAPVSFR+RSASK S   +    FCL
Sbjct:   20 EAVQRMALVERRLSEQDNDLTEYRVTRSKAEGAVAALQDRQVEVRLSNLEDDLSGLKASLGGRTPTQELSEEIATTITTALTAEMQRSQARSDQIRGVELTTVSLERHLTDGEGGETARIRRELQDSEGSLQRRIEEVRASDLRRMEEISGEVLRERGNRLKDRAEVEQEVSNIRASLQRTEHSWHGRIHDRLDRLEGSVASTLSDHSHTRSSVTSIGSQLKQLQLEIQNARDTSRRTGQWASDRHEEAPSLAI-DGHHMPILAQSVQSAARPPQTTASTLAADSPKTALEESGEVLP---EEQDGA------TGSTNT-IATEEGVESATGVMIPAVQACDDQPTHVGCSSAVGLCSMPGRV-ATADATAGQENIDQDDNSGDVDNNSFSLRDADSAPPESNQRSVGSVVNTDKDIEAPYPFKTGEGIGTPEKNGKLTEPPPADRLRDHRKVIHTS---SADTLRKSALAAVSFSAEEDAVLAASAEEAGDGRPSQSIRGRSPCASPSSVSSCGSSAPSXXXXXXSPLPLLHTPSVDSTDAPQAGDPGGAEKPFAATTPAE-----ALDLNISPPKLLGDGLGASDKGKLADTE-AGGSDVSQSRMARSTKSGSS----SDSSFSVDDDEAVVGQQRGLGLPETCDNIDSSSRPGVGKTCAPTSSRSTPTTSERGTCDDVSATAGVSTYGGRVHHKNPQKGPPPRAPRPEMPSETRRKSVAAVSTGPAPVSFRDRSASKDSGVVTAQCEFCL 747          
BLAST of mRNA_L-elsbetiae_contig1912.5643.1 vs. uniprot
Match: A0A6H5L2E5_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E5_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 1.180e-29
Identity = 221/725 (30.48%), Postives = 313/725 (43.17%), Query Frame = 0
Query:   95 QVKQLELTVESMGRRLATGGADEMARIRREIQNNEGALHRRIEEVQALDLRRMDELSRDLLREKENRISGLKEVS-----------------------------------------------------EEVSNVRVSLLHSDQRSHGQIHERLDRIERCTSKVDDDNAKTKSFVFSISAQLKQMQLQVQDARDIRMRADKLPGEGYQERQPLAVADGRMSPLSQL---APVLPQTPSSALSRPLPHTAVGSDIEASPGSGREREGAHANFGNTGAEITRTSTQRGRVEVCNTGAVAGLV--CDLPPTSAETSSFNSSQPVPGRI-PSTATAASAQANRDCGNRQNRIEGKPPTIENRLADP---SEREIGSNGGAGNGSDNTSKPDPTSVRFGSLLVEGTSHTTPLPRGIEEPRREEVPQTSPKASMEHLRKA----------ALATVSLSAQEDEEDAGIARGNGVDQATENRSRSAFAESEPSS----------------SXXXXXHSPSSPCRFFPRKGVGVPEADT-ARVQPTTQGPTPSGDTKPSTLEP--VRNYLSSGTHGDATDTEEAAGNVVLSNRAAAPSKDLETVERESDSSFSVEDERA-----------------GETPVETDRGRQPGGALSLSATTLKTSSYDSSVGK-SNVAGGKRTXXXXXXXXXXXXXXXXXXXXXXRSASWNTRRKSLEGCNTGPAPVSFRERSASK 710
            Q++ +ELT  S+ R L  G   E ARIRRE+Q++EG+L RRIEEV+A D+RRM+E+S ++LRE+ENR+    EV+                                                     +EVSNVR SL  ++Q  HG+IH+RLDR+E   +    D++ T+S V SI +QLKQ+QL++Q+ARD R RA +   +   E    A+ +     L+Q+   A    QT +S L+   P TA+    E  P    E++GA  +        T T  +   VE   TGA+   V  CD  PT  E SS      +PG + P+ ATA     ++D  +    ++ K   + +  + P    +R +GS     NG D       +  ++     EGT   TP  RG        +P+  P   +   RKA          ALA VS SA+ED   A  A   G D       R     S PSS                 XXXXXH+PS           G P+AD     +      +P+    P+   P  + + L +       DTE A G+ V  +R AA +K   +    SDSSFSV+D+ A                   TP  T R   PGG  + + T+  ++S  S  G   +V+                         XX     + RRKS+   +TGPAPVSFR+RSASK
Sbjct:  209 QIRGVELTTASLERHLTGGEGSETARIRRELQDSEGSLQRRIEEVRASDVRRMEEISGEVLRERENRLKDRAEVNRDSLWRHQTTWFTGSGKINERDTKPATMAHFRSVYPRAELSRMARDMRSVMVEKEVSNVRASLERTEQYWHGRIHDRLDRLEGSMASTLSDHSHTQSLVTSIGSQLKQLQLEIQNARDTRRRAGQWASDRRGEAPSRAIGNHHTPILAQVVQSAARPSQTTASTLAADSPKTALEESGEVLP---EEQDGARGS--------TNTIAREEGVE-STTGAMIPAVQACDDQPTPLECSSAVGLCSMPGGVTPADATAGQGSIDQD--DYLGDVDNKSCPLRDGDSAPFKSGQRSVGSV--VDNGKD-------SETQYPFKTGEGTG--TPEQRGT-------LPEPPPVDRLHVHRKAIHTSSADTLRALAAVSFSAEEDAALAASAEEVG-DGHPSQLIRGPSPRSSPSSVPSCGXXXXXXXXXXXXXXXXXHTPSV-------NSTGAPQADDPGGAEKYFAATSPAEALDPNVAPPKLLGDGLGASDSSKIADTE-AGGSDVSQSRMAASTKPGSS----SDSSFSVDDDEAVVGQQRGLGLRETCDNDHSTPTTTSR---PGGGKTCAPTSSLSTSTTSERGTCDDVSATPGVSTYGGRVHHKNPQKGPPPRAXXXEMPLDMRRKSMAAVSTGPAPVSFRDRSASK 885          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1912.5643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSX8_ECTSI2.160e-6934.79SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2E5_9PHAE1.180e-2930.48SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1912contigL-elsbetiae_contig1912:4546..11918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1912.5643.1mRNA_L-elsbetiae_contig1912.5643.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1912 2891..11927 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1912.5643.1 ID=prot_L-elsbetiae_contig1912.5643.1|Name=mRNA_L-elsbetiae_contig1912.5643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=745bp
MDEIMRRISLVDRRVMEQDNDFADSRIISSRVEGMISALQGRQVETRLLT
LENDTSDLNDSLGQAATRELSAGIAASVEKALAAEMQRTQTSIEQVKQLE
LTVESMGRRLATGGADEMARIRREIQNNEGALHRRIEEVQALDLRRMDEL
SRDLLREKENRISGLKEVSEEVSNVRVSLLHSDQRSHGQIHERLDRIERC
TSKVDDDNAKTKSFVFSISAQLKQMQLQVQDARDIRMRADKLPGEGYQER
QPLAVADGRMSPLSQLAPVLPQTPSSALSRPLPHTAVGSDIEASPGSGRE
REGAHANFGNTGAEITRTSTQRGRVEVCNTGAVAGLVCDLPPTSAETSSF
NSSQPVPGRIPSTATAASAQANRDCGNRQNRIEGKPPTIENRLADPSERE
IGSNGGAGNGSDNTSKPDPTSVRFGSLLVEGTSHTTPLPRGIEEPRREEV
PQTSPKASMEHLRKAALATVSLSAQEDEEDAGIARGNGVDQATENRSRSA
FAESEPSSSPSSSSHSPSSPCRFFPRKGVGVPEADTARVQPTTQGPTPSG
DTKPSTLEPVRNYLSSGTHGDATDTEEAAGNVVLSNRAAAPSKDLETVER
ESDSSFSVEDERAGETPVETDRGRQPGGALSLSATTLKTSSYDSSVGKSN
VAGGKRTTHEERAAVNGEQRTPPPPPPPPRSASWNTRRKSLEGCNTGPAP
VSFRERSASKASRHTSKSTCFCLTPTFNGRSRLLFPFTRNRMLF*
back to top