prot_L-elsbetiae_contig1910.5634.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1910.5634.1
Unique Nameprot_L-elsbetiae_contig1910.5634.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length621
Homology
BLAST of mRNA_L-elsbetiae_contig1910.5634.1 vs. uniprot
Match: A0A6H5JBZ3_9PHAE (OTU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ3_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 3.160e-43
Identity = 255/653 (39.05%), Postives = 296/653 (45.33%), Query Frame = 0
Query:    1 RYGIPAATLAHPDPEGEAIGNYMVTTPYYTEEDKQYRMAVLRGAHMTPEADAVRVTMAHTAEAAFDRLARAQEEEINRALLAPESGDGNLAPPSAADGARSGDALDGTTASGXXXXXXXXXXXXXXXXXXXXXXXXLPLPSPGGPEVGPYAAAATVSGAATTAAAREREGLVSRSGSNTTDVSDDPTAGSFVDNDVGGRGDGAAVGEDRIPHSEGSADAASAGKGSTCAG----------------------------------AVG-GAGGVGRSRGRS---GSRSPXXXXXXXPVEVAAAEGSTXXXXXXXXXXXXXXXXXXPALGSRLLSAPLGVLSAVGAWATGRGRASIGSADXXXXXXXXXXXXAVAGCDRPISGEVEKEAPTPPPVSGLPDGAALTGGDVSSSRDAPVPSPLAEGRLDGTDATRPPDLNLGVPEPAGVSAHRSNHTGGRSGASSSRRPPSVHLPPAEGGMDLDMPLESSRGRARGEGEAVEAAASYGKRKPECSPAVTPDGLNPGQHFGDRAGGSLGAETAGSGXXXXXXXXXXEQDWRVPEPSAAKITGSRR---SRGKTATAGPSARXXXXXXXXXXXXXXXXXXXXXXXXGSGVRGEGSNTGGRDHGGAYSFEEVDAAAKERYDATARWRAAR 612
            RYG+P AT+A+P PE + + +Y++TT +YTEE KQY MAVLRGA+MTPEA  VR  MA TA  AFDRLA+ QEEEI RALLA E  +                         XXXXXXXXXXXXXXXXXXX      P                         A +  +GL S S S+TTD+SD PTAG FVD+  G R  GA  G                                                          AVG  AG  GR  G     G R+        P   A   G                    P +GSRLLSAPL +LSAVGAWATGRGR S+GSA     XXXXXXXX           +  + A +   +S     +   GG  +S R          G     D  RP  L    P    +     +  G   GAS+S  P SVH+P  E GM L+ P  +      G GEA  AA + GKRKP CSPA+TP+G NPGQHFGD    +  + TAG            E+DWRV   +AA   GSRR    R  T TAG    XXXXXXXXXXXXXXXXXXX           EG    G   G A S     AAA E Y AT RWR+AR
Sbjct:  222 RYGLPPATVANPRPEEDFLEDYLMTTLFYTEEGKQYPMAVLRGAYMTPEAADVRAAMAQTAVTAFDRLAKEQEEEIKRALLASEGENXXX-------------------XXXXXXXXXXXXXXXXXXXXXXQGPTQSPPXXXXXXXXXXXXXXXXXXXXXXATATKHGDGLCSWSASSTTDLSDGPTAGLFVDDGNGERDKGAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVGVPAGEAGRPSGEEDTDGRRARLERPESSPR--AEGNGGGVDGGIGGGGSEDSPPVASPPIGSRLLSAPLDMLSAVGAWATGRGRYSVGSAASDTAXXXXXXXXXXXXXXXXXLSDGGRTASSSDSIS-----STAAGGPPASPRSGNGVGSRTGGSGGAGDGARPGKLAGASPLDLRLDDFSGHGAGDDGGASASGMPRSVHVPGEEEGMGLNSPPPN------GNGEAEVAATTNGKRKPACSPAITPEGANPGQHFGDARSTAAASATAG-----------VEEDWRVANTAAAP--GSRRRSKGRNSTGTAGXXXXXXXXXXXXXXXXXXXXXXXQE---------EGEEKPGESTGVAASVRAF-AAATEAYHATERWRSAR 819          
BLAST of mRNA_L-elsbetiae_contig1910.5634.1 vs. uniprot
Match: D8LJP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP5_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.240e-21
Identity = 104/216 (48.15%), Postives = 119/216 (55.09%), Query Frame = 0
Query:  287 PALGSRLLSAPLGVLSAVGAWATGRGRASIGSA--------DXXXXXXXXXXXXAVAGCDRPISGEVEKEAPT----PPPVSGLPDGAALTGGDVSSSRDAPVPSPLAEGRLDGTDATRPPDLNLGVPEPAGVSAHRSNHTGGRSGASSSRRPPSVHLP-PAEGGMDLDMPLESSRGRARGEGEAVEAAASYGKRKPECSPAVTPDGLNPGQHFGD 489
            P +GSRLLSAPL +LSAVGAWATGRGR S+GSA         XXXXXXXXXXXX+++   R  S      + T    PP +    DG     G   S+ D   P   A           P DL L      G S H     GG SGAS+S RPPSVH+P   E GM L+ P  +      G GEA  AA + GKRKP CSPAVTP+G NPGQHFGD
Sbjct:  257 PPIGSRLLSAPLDMLSAVGAWATGRGRYSVGSAASDTAAXXXXXXXXXXXXXXXSLSDGGRTASSSESSISSTAAGDPPALPRSGDGVGSRTGGSGSAGDGARPGTYA--------GASPLDLRLD-----GFSGHGG---GGDSGASASGRPPSVHVPGEEEDGMVLNSPPPN------GNGEAEVAATTNGKRKPVCSPAVTPEGPNPGQHFGD 450          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1910.5634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBZ3_9PHAE3.160e-4339.05OTU domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJP5_ECTSI1.240e-2148.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1910contigL-elsbetiae_contig1910:18130..22038 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1910.5634.1mRNA_L-elsbetiae_contig1910.5634.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1910 18130..22038 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1910.5634.1 ID=prot_L-elsbetiae_contig1910.5634.1|Name=mRNA_L-elsbetiae_contig1910.5634.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=621bp
RYGIPAATLAHPDPEGEAIGNYMVTTPYYTEEDKQYRMAVLRGAHMTPEA
DAVRVTMAHTAEAAFDRLARAQEEEINRALLAPESGDGNLAPPSAADGAR
SGDALDGTTASGGGGRRSNSDGSSGGQRSESPPPPPLPLPSPGGPEVGPY
AAAATVSGAATTAAAREREGLVSRSGSNTTDVSDDPTAGSFVDNDVGGRG
DGAAVGEDRIPHSEGSADAASAGKGSTCAGAVGGAGGVGRSRGRSGSRSP
PAAPAAPPVEVAAAEGSTAGGGRGGGEDPPALLSPPPALGSRLLSAPLGV
LSAVGAWATGRGRASIGSADDDAAAAAAATAAAVAGCDRPISGEVEKEAP
TPPPVSGLPDGAALTGGDVSSSRDAPVPSPLAEGRLDGTDATRPPDLNLG
VPEPAGVSAHRSNHTGGRSGASSSRRPPSVHLPPAEGGMDLDMPLESSRG
RARGEGEAVEAAASYGKRKPECSPAVTPDGLNPGQHFGDRAGGSLGAETA
GSGGGGGGGGGGGEQDWRVPEPSAAKITGSRRSRGKTATAGPSARRAAAA
AAAAAVLDDAADDAAAAAAGSGVRGEGSNTGGRDHGGAYSFEEVDAAAKE
RYDATARWRAARPSRSTGGGG
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