prot_L-elsbetiae_contig19089.5621.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig19089.5621.1
Unique Name	prot_L-elsbetiae_contig19089.5621.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	127

Homology

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BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Match: A0A8E6D2H5_9PHAE (50S ribosomal protein L19, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D2H5_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 2.820e-54
Identity = 86/123 (69.92%), Postives = 107/123 (86.99%), Query Frame = 0

Query:    4 NNLVIKINSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKERIQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKSSQIRRSKLYYLRYLAGKASRLKQKFS 126
            NNL+I  NST++  S+EKP+IK  +P +  GD VKIGVLI+EGNKERIQY+QG+VI Q N GINKTI+VR++IQGIGVER FLL+SPK+ESI I+KSS++RRSKLYYLR L+GKASRLKQ+F+
Sbjct:    6 NNLIISFNSTKVFQSLEKPFIKTSLPILSPGDTVKIGVLIKEGNKERIQYYQGVVIAQNNRGINKTILVRRIIQGIGVERTFLLHSPKVESIEIKKSSRVRRSKLYYLRALSGKASRLKQRFN 128

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BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Match: A0A7S6UA05_9STRA (50S ribosomal protein L19, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA05_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.640e-49
Identity = 76/122 (62.30%), Postives = 103/122 (84.43%), Query Frame = 0

Query:    5 NLVIKINSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKERIQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKSSQIRRSKLYYLRYLAGKASRLKQKFS 126
            N V+  N   +I S+E  Y K D+P + +GD VKIGVLI+EG KERIQY+QG++I ++N+GINKTI+VR+V+QGIGVER+FL++SPKL SI I++SS++R+SKLYYLR L+GKASRLKQ+F+
Sbjct:    3 NFVVTFNKNSLIQSVEHKYYKSDLPTLFIGDTVKIGVLIKEGTKERIQYYQGIIIAKQNTGINKTIIVRRVLQGIGVERMFLIHSPKLNSIEIKRSSRVRKSKLYYLRGLSGKASRLKQRFN 124

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BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Match: A0A2U9NPS4_9STRA (50S ribosomal protein L19, chloroplastic n=1 Tax=Attheya longicornis TaxID=451786 RepID=A0A2U9NPS4_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.100e-47
Identity = 75/119 (63.03%), Postives = 102/119 (85.71%), Query Frame = 0

Query:    7 VIKINSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKERIQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKSSQIRRSKLYYLRYLAGKASRLKQKF 125
            + K+N+ + +N++E  +IKK +PK+ +GDNVKIGV I EGNKERIQ+++G VI ++NS IN TI VRKV+QGIG+ERIFL++SPK++SIT+ +SS++RRSKLYYLR L GKASRLKQ+F
Sbjct:    1 MFKLNTEETLNTLESTFIKKSLPKVSIGDNVKIGVKIIEGNKERIQFYEGTVIAKKNSSINCTITVRKVLQGIGIERIFLIHSPKVDSITVLRSSKVRRSKLYYLRNLKGKASRLKQRF 119

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BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Match: A0A8F0FAK4_9PHAE (Ribosomal protein L19 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAK4_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 3.030e-47
Identity = 78/116 (67.24%), Postives = 98/116 (84.48%), Query Frame = 0

Query:   10 INSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKERIQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKSSQIRRSKLYYLRYLAGKASRLKQKF 125
            +NS +IIN +E+   KKDIPKI VGD VKIG+LI+EGNKERIQY+QG+++ ++NSGIN  I VRKV QGIGVER FL++SPK ESIT+ KSS++RRSKLYYLR + GK SRLK++F
Sbjct:   12 LNSEKIINLVEEAQKKKDIPKIFVGDTVKIGILIKEGNKERIQYYQGIILGKKNSGINLMISVRKVFQGIGVERNFLIHSPKFESITVIKSSRVRRSKLYYLRNIIGKKSRLKERF 127

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BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Match: A0A023HAL8_9STRA (50S ribosomal protein L19, chloroplastic n=1 Tax=Didymosphenia geminata TaxID=1115533 RepID=A0A023HAL8_9STRA)

HSP 1 Score: 156 bits (395), Expect = 4.470e-47
Identity = 69/120 (57.50%), Postives = 103/120 (85.83%), Query Frame = 0

Query:    7 VIKINSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKERIQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKSSQIRRSKLYYLRYLAGKASRLKQKFS 126
            ++K+N+ + I ++E  ++KKD+P + +GDN+KIGV I EGNKER+Q+++G ++ ++NS IN TI VRK++QG+G+ER+FL++SPK+ESIT+ KSS++RR+KLYYLR L GKASRLKQKF+
Sbjct:    1 MLKLNTQKTIRNVENSFLKKDLPTLQIGDNIKIGVKIVEGNKERVQFYEGTILAKKNSSINTTITVRKILQGVGIERVFLIHSPKIESITVLKSSKVRRAKLYYLRDLKGKASRLKQKFN 120

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BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Match: A0A516Z9W5_9STRA (50S ribosomal protein L19, chloroplastic n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A516Z9W5_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.450e-46
Identity = 74/121 (61.16%), Postives = 102/121 (84.30%), Query Frame = 0

Query:    5 NLVIKINSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKERIQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKSSQIRRSKLYYLRYLAGKASRLKQKF 125
            N + KIN+T ++N +E  YIK+D+P + VGD V++GV IREG K R Q ++G++I Q+NSGINKTI VR+V+QGIGVER FLL+SPK+++I I++SS++RRSKLYYLR L+GKA+RLKQ+F
Sbjct:    4 NEITKINNTALLNKVESEYIKEDLPNVRVGDTVRLGVEIREGKKTRTQAYEGVIISQKNSGINKTITVRRVMQGIGVERCFLLHSPKIKTIEIKRSSKVRRSKLYYLRELSGKATRLKQRF 124

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BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Match: A0A8F5PLI7_9STRA (50S ribosomal protein L19, chloroplastic n=4 Tax=Chaetoceros TaxID=49237 RepID=A0A8F5PLI7_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.820e-46
Identity = 73/119 (61.34%), Postives = 100/119 (84.03%), Query Frame = 0

Query:    7 VIKINSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKERIQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKSSQIRRSKLYYLRYLAGKASRLKQKF 125
            ++K+N  Q I ++ K ++KKD+PKI +GD+VKIGV I EGNKER+Q+++G +I ++NS IN TI VRKV+QGIG+ERIFL++SPK++SI + +SS++RRSKLYYLR L GKASRLKQ F
Sbjct:    1 MVKLNKQQTIENLHKHFLKKDLPKISIGDSVKIGVKIIEGNKERVQFYEGTIIAKKNSSINTTITVRKVLQGIGIERIFLIHSPKIDSIEVLRSSKVRRSKLYYLRNLKGKASRLKQAF 119

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BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Match: A0A023JEN2_9STRA (50S ribosomal protein L19, chloroplastic n=1 Tax=Eunotia naegelii TaxID=1458866 RepID=A0A023JEN2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 3.550e-46
Identity = 76/119 (63.87%), Postives = 99/119 (83.19%), Query Frame = 0

Query:    7 VIKINSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKERIQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKSSQIRRSKLYYLRYLAGKASRLKQKF 125
            + K+NS + IN +EK ++KKD+P I +GD VKIGV I EGNKERIQ+++G VI ++NS IN TI VRK++QGIGVERIFL++SPK++SI I +SS++RRSKLYYLR L GKA+RLKQ F
Sbjct:    1 MFKLNSQKTINDLEKNFVKKDLPIISIGDTVKIGVKIIEGNKERIQFYEGTVIAKKNSSINTTITVRKILQGIGVERIFLVHSPKIDSINILRSSKVRRSKLYYLRNLKGKATRLKQVF 119

[Close]

BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Match: A0A8F0WGV8_9STRA (50S ribosomal protein L19, chloroplastic n=1 Tax=Tryblionella apiculata TaxID=1003145 RepID=A0A8F0WGV8_9STRA)

HSP 1 Score: 154 bits (389), Expect = 3.660e-46
Identity = 75/117 (64.10%), Postives = 99/117 (84.62%), Query Frame = 0

Query:    9 KINSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKERIQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKSSQIRRSKLYYLRYLAGKASRLKQKF 125
            K+N  Q IN++EK ++K+++P I +GDNVKIGV I EGNKER+Q+++G VI ++NS IN TI VRK +QGIG+ERIFL++SPKLESIT+ +SS++RRSKLYYLR L GKASRLK+ F
Sbjct:    3 KLNIQQTINNVEKGFLKENLPVIKIGDNVKIGVKIIEGNKERVQFYEGTVIAKKNSSINTTITVRKTLQGIGIERIFLIHSPKLESITVLRSSKVRRSKLYYLRNLKGKASRLKEIF 119

[Close]

BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Match: A0A8F0F7M0_9PHAE (Ribosomal protein L19 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7M0_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 7.090e-46
Identity = 80/127 (62.99%), Postives = 101/127 (79.53%), Query Frame = 0

Query:    1 MTNNNL--VIKINSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKERIQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKSSQIRRSKLYYLRYLAGKASRLKQKF 125
            M N+NL  V  + + +I++ +E  YIKKD+ KI VGD VKIGV I+EGNKERIQY+QG+++ + NSG+N TI VRKV QGIGVER FL++SPK ESI I KSS++RRSKLYYLR + GK SRLKQ+F
Sbjct:    1 MKNSNLRQVPLLPTAKIMDFVESTYIKKDVSKIFVGDTVKIGVFIKEGNKERIQYYQGIILGKNNSGVNLTISVRKVFQGIGVERRFLIHSPKFESIEIIKSSRVRRSKLYYLRSIVGKGSRLKQRF 127

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig19089.5621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8E6D2H5_9PHAE	2.820e-54	69.92	50S ribosomal protein L19, chloroplastic n=1 Tax=I...	[more]
A0A7S6UA05_9STRA	2.640e-49	62.30	50S ribosomal protein L19, chloroplastic n=1 Tax=S...	[more]
A0A2U9NPS4_9STRA	1.100e-47	63.03	50S ribosomal protein L19, chloroplastic n=1 Tax=A...	[more]
A0A8F0FAK4_9PHAE	3.030e-47	67.24	Ribosomal protein L19 n=1 Tax=Desmarestia aculeata...	[more]
A0A023HAL8_9STRA	4.470e-47	57.50	50S ribosomal protein L19, chloroplastic n=1 Tax=D...	[more]
A0A516Z9W5_9STRA	1.450e-46	61.16	50S ribosomal protein L19, chloroplastic n=1 Tax=F...	[more]
A0A8F5PLI7_9STRA	1.820e-46	61.34	50S ribosomal protein L19, chloroplastic n=4 Tax=C...	[more]
A0A023JEN2_9STRA	3.550e-46	63.87	50S ribosomal protein L19, chloroplastic n=1 Tax=E...	[more]
A0A8F0WGV8_9STRA	3.660e-46	64.10	50S ribosomal protein L19, chloroplastic n=1 Tax=T...	[more]
A0A8F0F7M0_9PHAE	7.090e-46	62.99	Ribosomal protein L19 n=2 Tax=Laminariales TaxID=2...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 99..124 score: 50.96 coord: 45..74 score: 51.39 coord: 15..44 score: 31.39
IPR001857	Ribosomal protein L19	TIGRFAM	TIGR01024	TIGR01024	coord: 14..124 e-value: 4.3E-40 score: 134.4
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 15..124 e-value: 6.7E-40 score: 135.5
IPR001857	Ribosomal protein L19	PIRSF	PIRSF002191	Ribosomal_L19	coord: 1..126 e-value: 9.7E-43 score: 143.2
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 10..125
IPR001857	Ribosomal protein L19	HAMAP	MF_00402	Ribosomal_L19	coord: 13..125 score: 28.06
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 8..125 e-value: 7.0E-12 score: 47.2
None	No IPR available	PANTHER	PTHR15680:SF11		coord: 10..125
IPR018257	Ribosomal protein L19, conserved site	PROSITE	PS01015	RIBOSOMAL_L19	coord: 97..112
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 13..125

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig19089	contig	L-elsbetiae_contig19089:80..460 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig19089.5621.1	mRNA_L-elsbetiae_contig19089.5621.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig19089 80..460 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig19089.5621.1 ID=prot_L-elsbetiae_contig19089.5621.1|Name=mRNA_L-elsbetiae_contig19089.5621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
MTNNNLVIKINSTQIINSIEKPYIKKDIPKILVGDNVKIGVLIREGNKER
IQYFQGLVICQRNSGINKTIMVRKVIQGIGVERIFLLNSPKLESITIQKS
SQIRRSKLYYLRYLAGKASRLKQKFS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001857	Ribosomal_L19
IPR038657	L19_sf
IPR018257	Ribosomal_L19_CS
IPR008991	Translation_prot_SH3-like_sf