prot_L-elsbetiae_contig19088.5620.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19088.5620.1
Unique Nameprot_L-elsbetiae_contig19088.5620.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
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BLAST of mRNA_L-elsbetiae_contig19088.5620.1 vs. uniprot
Match: A0A6H5KJX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJX9_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.870e-10
Identity = 56/99 (56.57%), Postives = 64/99 (64.65%), Query Frame = 0 
Query:   80 MTMATPAPVYRGGGXXXXX-ALF-----GXXXXXXXXDRAIFFGRVEDGLTT-LGLTVGISRSHVSHRPVSPQPKDMAIKIRTEDCGRIDVPTGAWADC 171
            MTMATP PVYRG  XXXXX A+F     G  XXXXXX    FFGRVEDG+T  L L + + R       VSPQPKDM I++R ED G I+ P GAW +C
Sbjct: 1087 MTMATPTPVYRGXXXXXXXXAVFAPPRAGVGXXXXXXGGLGFFGRVEDGITAFLVLALSVLRR------VSPQPKDMKIEVRPEDRGSIEAPVGAWIEC 1179
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19088.5620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJX9_9PHAE1.870e-1056.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19088contigL-elsbetiae_contig19088:148..2200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19088.5620.1mRNA_L-elsbetiae_contig19088.5620.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19088 148..2200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19088.5620.1 ID=prot_L-elsbetiae_contig19088.5620.1|Name=mRNA_L-elsbetiae_contig19088.5620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
PASGVAGAVTGIPPPRLTRGTVVGGGGGSGNGGRRGSRCRFKTAGADEGH
IAGRYRGGEKPPQEPEQRLCGCCRWRRAIMTMATPAPVYRGGGGGDGDAL
FGRGRGCGDGDRAIFFGRVEDGLTTLGLTVGISRSHVSHRPVSPQPKDMA
IKIRTEDCGRIDVPTGAWADCSYPATVFRCRC
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