prot_L-elsbetiae_contig19064.5614.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19064.5614.1
Unique Nameprot_L-elsbetiae_contig19064.5614.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length53
Homology
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BLAST of mRNA_L-elsbetiae_contig19064.5614.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 48.1 bits (113), Expect = 5.630e-5
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:   10 CRR-RLKSTSLGRNHIDKNVLKTAECIFTKLLEVGASTFA 48
            CRR   K+ SLGR HID +VLKTAE +F +L +VGAST+A
Sbjct:  700 CRRLSTKAPSLGRQHIDDHVLKTAEHVFRQLTDVGASTYA 739
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19064.5614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE5.630e-562.50SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19064contigL-elsbetiae_contig19064:2699..2857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19064.5614.1mRNA_L-elsbetiae_contig19064.5614.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19064 2699..2857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19064.5614.1 ID=prot_L-elsbetiae_contig19064.5614.1|Name=mRNA_L-elsbetiae_contig19064.5614.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=53bp
LPIISLQRQCRRRLKSTSLGRNHIDKNVLKTAECIFTKLLEVGASTFAQD
VS*
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