prot_L-elsbetiae_contig1906.5612.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1906.5612.1
Unique Nameprot_L-elsbetiae_contig1906.5612.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length606
Homology
BLAST of mRNA_L-elsbetiae_contig1906.5612.1 vs. uniprot
Match: A0A6H5JK20_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK20_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 1.460e-72
Identity = 373/678 (55.01%), Postives = 407/678 (60.03%), Query Frame = 0
Query:    1 MQQRKAGREDGLDRLKERLRRLESKRGAIRADLDRLRQRITSKAERVKTLRVLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRFGARAKELEARGNETEALLSGIKEDKVRRLADATRRERAAEESLLEMEAKKRQAEALSSSVAT-------------------------------------------PRDNDDVINDDASPLXXXXXXXXXXXXXXXXXXXXXXDKPGPAAAPGVSGISEKKKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGAGKPSPTPVG------------------------------------GVDTGRKGTDSAAAPSTAVAEASAXXXXXXXXXXXSEGEQTPKLA------AAASWASSERMRQVSNPEGGAGAGVRGGAAGGGVVRFIQRDLDAARLMIRARKLDLAAREWVGVRCLLLRXXXXXXXXXXXXXXXXDGASCAGRGAPQSPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKAATAARGTPPTLEVDRALQQASPENAGLVVESPDEAKAASGV--SEVGVGWGGWGSGGCEKQYLAQAHTQEFLAAMSVRGGWETWGAASASAACVVRGVKAVLSGKCANALCLLLGEKAASRRYASSGGYS 591
            MQQRK  +EDGL +LKERLRRLESKRGAIRADLDRLR+R+ SK +R+KTLR LADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRF ARAKELEA G +TEALL+G+KEDKVRRLADA RRERAAEE+LL         +  +  V T                                                          XXXXXXXXXXXXXXXXXXXXXX                     XXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXX GG G+ + +P                                                   AP+  +A   A             G   P LA      A+A  A +  +   S+ E GA  G       GG VRFIQRDL+AA+LM+RARKLDLAAREWVG+RCLLLR    XXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       KAATA R +  + E+D ALQ ASPE+AGLVVESP EA    G    E  +GWGGWGSGG EK+YLAQAHTQE+LA MS  G  E WGAASASAACVVRGV AVLSG+C NALCLL        R+A SGGYS
Sbjct:  675 MQQRKNSKEDGLGKLKERLRRLESKRGAIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRFRARAKELEAHGVDTEALLAGMKEDKVRRLADAHRRERAAEEALL--------LQVQAPPVPTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKXXXXXXXXXXXXXXXXXXGGCGESNGSPASTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPAPPLAATGAC------------GPPRPSLAIVTTSTASALAAPALAVEFPSSGEDGAKGGRANSNPVGGGVRFIQRDLEAAQLMVRARKLDLAAREWVGLRCLLLRGATAXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSASSFPKAATAVRRSW-SKELDAALQ-ASPEDAGLVVESPQEAVPPGGGCGEEARMGWGGWGSGGDEKRYLAQAHTQEYLAHMSAMGRQE-WGAASASAACVVRGVSAVLSGRCTNALCLLENPG----RHAPSGGYS 1317          
BLAST of mRNA_L-elsbetiae_contig1906.5612.1 vs. uniprot
Match: D8LN85_ECTSI (Histone deacetylase superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN85_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 2.620e-69
Identity = 351/624 (56.25%), Postives = 384/624 (61.54%), Query Frame = 0
Query:    1 MQQRKAGREDGLDRLKERLRRLESKRGAIRADLDRLRQRITSKAERVKTLRVLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRFGARAKELEARGNETEALLSGIKEDKVRRLADATRRERAAEESLLEMEAKKRQAEALSSSVATPRDNDDVINDDASPLXXXXXXXXXXXXXXXXXXXXXXDKP-----GPAAAPGVSGISEKKKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SGGAGKPSPTPVGGVDTGRKGTDSAAAPSTAVAEASAXXXXXXXXXXXSEGEQ---TPKLAAAASWASSERMRQVSN----------------PEGGAGAGVRGGAAG----GGVVRFIQRDLDAARLMIRARKLDLAAREWVGVRCLLLRXXXXXXXXXXXXXXXXDGASCAGRGAPQSPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKAATAARGTPPTLEVDRALQQASPENAGLVVESPDEAKAASGV--SEVGVGWGGWGSGGCEKQYLAQAHTQEFLAAMSVRGGWETWGAASASAACVVRGVKAVLSGKCANALCLLLGEKAASRRYASSGGYS 591
            MQ+RK  REDGL +LKERLRRLESKRG+IRADLDRLR+R+ SK +R+KTLR LADECWAEGEPSIGRDTLDNLEAMIRKEKTHLS+F ARAKELEA G +TEALL+G+KEDK                          +A +L  + A                XX    XXXXXXXX        +KP     G A               XXXXXXXXXXXXXXXXXXXXXXXXXX                XX   +GG G+ +  P          T        A+A    XXXXXXXXXXX         P LAA  + A       +                  P  G   G RGG A     GG VRFIQRDL+AA+LM++ARKLDLAAREWVG+RCLLLRXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     KAATA R +  + E+D ALQ ASPE+AGLVVESP EA    G    E  VGWGGWGSGG EK+YLAQAHTQEFLA MS  G  E WGAASASAACVVRGV AVLSG+C NALCLL        R+A SGGYS
Sbjct:  789 MQERKNSREDGLGKLKERLRRLESKRGSIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSKFRARAKELEAHGVDTEALLAGMKEDK----------------------GGGGEASSLPGTSAAASPTATXXXXXXXXXXXTGSDXXXXXXXXRGASSREDEKPVGVVRGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPTKKAGASPATAAAKXXXXXTGGCGESNGFPASAPXXXXXATKXXXXXXGALATXXXXXXXXXXXXXXXXXXXXXPAPPLAATGACAPPRPSLAIMTTSTASALAAPALAVEVPSSGED-GARGGRANSNPVGGGVRFIQRDLEAAQLMVQARKLDLAAREWVGLRCLLLRXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSFPKAATAVRRSW-SKELDAALQ-ASPEDAGLVVESPREAVPPGGGCGEEARVGWGGWGSGGDEKRYLAQAHTQEFLAHMSAMGRQE-WGAASASAACVVRGVSAVLSGRCTNALCLLENPG----RHAPSGGYS 1376          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1906.5612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK20_9PHAE1.460e-7255.01Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
D8LN85_ECTSI2.620e-6956.25Histone deacetylase superfamily n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 116..143
NoneNo IPR availableCOILSCoilCoilcoord: 5..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1906contigL-elsbetiae_contig1906:6164..10075 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1906.5612.1mRNA_L-elsbetiae_contig1906.5612.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1906 6164..10075 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1906.5612.1 ID=prot_L-elsbetiae_contig1906.5612.1|Name=mRNA_L-elsbetiae_contig1906.5612.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=606bp
MQQRKAGREDGLDRLKERLRRLESKRGAIRADLDRLRQRITSKAERVKTL
RVLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRFGARAKELEARGNE
TEALLSGIKEDKVRRLADATRRERAAEESLLEMEAKKRQAEALSSSVATP
RDNDDVINDDASPLSSAPASAAAGIVAAGAGRKGSGDKPGPAAAPGVSGI
SEKKKVSAAVVGGGGKEGSPAPSSMVLTASRTTTGSASVAAAAAAAATTA
TSGGAGKPSPTPVGGVDTGRKGTDSAAAPSTAVAEASAAPAAPGSGSGGS
EGEQTPKLAAAASWASSERMRQVSNPEGGAGAGVRGGAAGGGVVRFIQRD
LDAARLMIRARKLDLAAREWVGVRCLLLRRATAAAAAAAAAAASIDGASC
AGRGAPQSPMGGGGVAAAAASRSTLVLRPTATEAAPPLPSPSPPVKKGGG
GTTVAEAAAEAKAATAARGTPPTLEVDRALQQASPENAGLVVESPDEAKA
ASGVSEVGVGWGGWGSGGCEKQYLAQAHTQEFLAAMSVRGGWETWGAASA
SAACVVRGVKAVLSGKCANALCLLLGEKAASRRYASSGGYSDASVQGAGG
SGSGSG
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