prot_L-elsbetiae_contig19052.5610.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19052.5610.1
Unique Nameprot_L-elsbetiae_contig19052.5610.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length96
Homology
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BLAST of mRNA_L-elsbetiae_contig19052.5610.1 vs. uniprot
Match: D7FTP0_ECTSI (Similar to E1a binding protein P400 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP0_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 3.590e-5
Identity = 30/50 (60.00%), Postives = 33/50 (66.00%), Query Frame = 0 
Query:   42 GEVSSEPMDGXXXXXXXXXAFSDDSGAYMEDMMMLRADHGEQEASGSCGG 91
            G+VSS+PMD          AFSDDSGAYMED+MMLRAD  E E S   GG
Sbjct:  340 GDVSSDPMDSDED------AFSDDSGAYMEDIMMLRADQKESEVSQGLGG 383
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19052.5610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTP0_ECTSI3.590e-560.00Similar to E1a binding protein P400 (Partial) (Fra... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19052contigL-elsbetiae_contig19052:1135..2010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19052.5610.1mRNA_L-elsbetiae_contig19052.5610.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19052 1135..2010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19052.5610.1 ID=prot_L-elsbetiae_contig19052.5610.1|Name=mRNA_L-elsbetiae_contig19052.5610.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp
EESSSSSSGAGSSSDDGGGGAAREGSSSEEEEGQSSSGGQGGEVSSEPMD
GDGDEDEDEDAFSDDSGAYMEDMMMLRADHGEQEASGSCGGAGAGA
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