prot_L-elsbetiae_contig1905.5608.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1905.5608.1
Unique Nameprot_L-elsbetiae_contig1905.5608.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length347
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1905.5608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 28..61
e-value: 0.062
score: 22.4
coord: 154..187
e-value: 0.17
score: 21.0
coord: 112..145
e-value: 9.9
score: 15.0
coord: 238..271
e-value: 4.1
score: 16.4
coord: 196..229
e-value: 24.0
score: 11.6
coord: 70..103
e-value: 250.0
score: 2.7
coord: 280..313
e-value: 24.0
score: 11.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 196..229
score: 8.349
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 28..61
score: 9.116
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 112..145
score: 6.638
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 238..271
score: 6.903
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 70..103
score: 5.871
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 154..187
score: 6.903
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 280..313
score: 7.08
NoneNo IPR availablePFAMPF13374TPR_10coord: 76..106
e-value: 7.6E-4
score: 19.3
NoneNo IPR availablePFAMPF13424TPR_12coord: 111..181
e-value: 6.3E-17
score: 61.6
coord: 281..342
e-value: 1.1E-8
score: 35.3
coord: 7..60
e-value: 6.5E-10
score: 39.2
coord: 195..269
e-value: 1.2E-17
score: 64.0
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 214..338
coord: 69..174
coord: 92..219
coord: 9..97
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..186
e-value: 2.3E-45
score: 156.9
coord: 187..346
e-value: 1.3E-39
score: 138.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 15..142
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 113..310
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 28..313
score: 20.916

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1905contigL-elsbetiae_contig1905:4540..5580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1905.5608.1mRNA_L-elsbetiae_contig1905.5608.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1905 4163..7309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1905.5608.1 ID=prot_L-elsbetiae_contig1905.5608.1|Name=mRNA_L-elsbetiae_contig1905.5608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp
MKQEEKEALHRALQEATETLGDVHLKVAVALDELGLCVRRAGRLAEAEQF
FRQALQIKEEKLPHSDAEVVWTLEGLGRCVREQGRAREAEGLMKRALQIR
EAKLGPAGMSVAVTTHELARCVRQAGRPEEAEELFKQALQMKNALVGPDD
TSAAVTLHELGRCLRAAGRLEEAEGHLKRALLIKQAYLKIDDLEIATTLH
ELGLCVLQMGRLGEADKLFEDALQMKKAKLGADHPQVAVTLHELGRCARA
GHRLAEAEMIFKRALQIKETRLSPHHLEIPWTLIELGRCVREAGRTEEAK
SFLKRAFQIQEAKLGSDHESMAWTLHDLDLCVQTAGKSGEVIEVAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom