prot_L-elsbetiae_contig19018.5598.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19018.5598.1
Unique Nameprot_L-elsbetiae_contig19018.5598.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length68
Homology
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BLAST of mRNA_L-elsbetiae_contig19018.5598.1 vs. uniprot
Match: D7FS69_ECTSI (Vps16_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS69_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 5.400e-34
Identity = 60/68 (88.24%), Postives = 64/68 (94.12%), Query Frame = 0 
Query:    1 MSAKDPVVPTLRMCNCAGGAISETQLDRAAQAPGTASERGRLVTMGWTDGEMLVMVRERGGVEVRDIM 68
            MSAKD +VPTLR+CNCAGG ISET LD+A QAPGTASERGRL+TMGWTDGEMLVMVRERGGVEVRDIM
Sbjct:   58 MSAKDSIVPTLRVCNCAGGTISETILDKAVQAPGTASERGRLLTMGWTDGEMLVMVRERGGVEVRDIM 125
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BLAST of mRNA_L-elsbetiae_contig19018.5598.1 vs. uniprot
Match: A0A6H5KVY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY1_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 3.440e-32
Identity = 60/68 (88.24%), Postives = 65/68 (95.59%), Query Frame = 0 
Query:    1 MSAKDPVVPTLRMCNCAGGAISETQLDRAAQAPGTASERGRLVTMGWTDGEMLVMVRERGGVEVRDIM 68
            MSAKD +VPTLR+CNCAGG ISET+LD+A QAPGTASERGRL+TMGWTDGEMLVMVRERGGVEVRDIM
Sbjct:   11 MSAKDSIVPTLRVCNCAGGTISETRLDKAVQAPGTASERGRLLTMGWTDGEMLVMVRERGGVEVRDIM 78
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19018.5598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS69_ECTSI5.400e-3488.24Vps16_N domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KVY1_9PHAE3.440e-3288.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19018contigL-elsbetiae_contig19018:2574..2777 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19018.5598.1mRNA_L-elsbetiae_contig19018.5598.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19018 2339..2777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19018.5598.1 ID=prot_L-elsbetiae_contig19018.5598.1|Name=mRNA_L-elsbetiae_contig19018.5598.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=68bp
MSAKDPVVPTLRMCNCAGGAISETQLDRAAQAPGTASERGRLVTMGWTDG
EMLVMVRERGGVEVRDIM
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