prot_L-elsbetiae_contig190.5589.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig190.5589.1
Unique Nameprot_L-elsbetiae_contig190.5589.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length174
Homology
BLAST of mRNA_L-elsbetiae_contig190.5589.1 vs. uniprot
Match: A0A6H5KLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLB3_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.410e-47
Identity = 107/187 (57.22%), Postives = 118/187 (63.10%), Query Frame = 0
Query:    1 MAWSSVHGGRLMLVKDLVYACLAEFGMRPAKATQEREVIQEIFRRHEASLKDSDG--FPFGPEGTAWAVVNARWWAQWKDYSRIGSEVTVPRGSLSRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------PXXXXXXXXXXXSSMGPTMAARSRASSRVFGSTPVLGGRGN 174
            MAWSSVHGGRLMLVKDLVYACLAEFGM+PAKA QEREVI EIFRRH+ +L D +G   P+GP GT WAV+NARW A W+DY RIG + T+PRGSLSR S       XXXXXXXXX                                           SS+GPTM  RSRASSRVFGS PVLGGRG+
Sbjct:  566 MAWSSVHGGRLMLVKDLVYACLAEFGMQPAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINARWLAGWRDYVRIGFDATMPRGSLSRVSSNSSIASXXXXXXXXXRQGPPATVAGAGVRSGTVANGRASGGGVGGDSSGLNRPSPPPPSSIGPTMTPRSRASSRVFGSAPVLGGRGH 752          
BLAST of mRNA_L-elsbetiae_contig190.5589.1 vs. uniprot
Match: D8LR49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR49_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.810e-42
Identity = 131/177 (74.01%), Postives = 142/177 (80.23%), Query Frame = 0
Query:   11 LMLVKDLVYACLAEFGMRPAKATQEREVIQEIFRRHEASLKDSDG--FPFGPEGTAWAVVNARWWAQWKDYSRIGSEVTVPRGSLSRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXX-----------SSMGPTMAARSRASSRVFGSTPVLGGRGN 174
            LMLVKDLVYACLAEFGMRPAKA QEREVI EIFRRH+ +L D +G   P+GP GT WAV+NA+WWAQW+DY RIG + T+PRGSLSR S      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX           SS+GPTM  RSRASSRVFGS PVLGGRG+
Sbjct:  514 LMLVKDLVYACLAEFGMRPAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINAQWWAQWRDYVRIGFDATMPRGSLSRVSSNSSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSIGPTMTPRSRASSRVFGSAPVLGGRGH 690          
BLAST of mRNA_L-elsbetiae_contig190.5589.1 vs. uniprot
Match: A0A835YVN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN1_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.770e-13
Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    1 MAWSSVHGGRLMLVKDLVYACLAEFGMRPAKATQEREVIQEIFRRHEASL-KDSDGFPFGPEGTAWAVVNARWWAQWKDYSRI 82
            MAWS+ H GR+ L+ DL +  +AE GMRPA A QER+V+ E  R+++A   ++   F +G  GT W +++  WW +W  Y+R 
Sbjct:  531 MAWSAAHPGRMQLLHDLAFIAIAECGMRPATAAQERDVVSEHMRQYDALHGREVPLFRYGAVGTPWNLIDQVWWNRWCAYARF 613          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig190.5589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KLB3_9PHAE1.410e-4757.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR49_ECTSI1.810e-4274.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVN1_9STRA1.770e-1342.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig190contigL-elsbetiae_contig190:7781..9973 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig190.5589.1mRNA_L-elsbetiae_contig190.5589.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig190 7781..9998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig190.5589.1 ID=prot_L-elsbetiae_contig190.5589.1|Name=mRNA_L-elsbetiae_contig190.5589.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=174bp
MAWSSVHGGRLMLVKDLVYACLAEFGMRPAKATQEREVIQEIFRRHEASL
KDSDGFPFGPEGTAWAVVNARWWAQWKDYSRIGSEVTVPRGSLSRASSSS
SITSNGGGGSGSSHQQPASALTGATAAAAAAGTPAITPPSPTPPPSSMGP
TMAARSRASSRVFGSTPVLGGRGN
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