prot_L-elsbetiae_contig1897.5574.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1897.5574.1
Unique Nameprot_L-elsbetiae_contig1897.5574.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length48
Homology
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BLAST of mRNA_L-elsbetiae_contig1897.5574.1 vs. uniprot
Match: A0A6H5JPS6_9PHAE (Non-structural maintenance of chromosomes element 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS6_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 2.130e-15
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0 
Query:    1 MSFTKADFDELKELYNMEGSHIPHRNDGPRSDYYDPLRDGNRESNRQ 47
            MSFT ADF ELKELY ME S+  HR++GP+SDYYDPL  GNRESNRQ
Sbjct:   67 MSFTPADFRELKELYGMEESNFEHRSEGPKSDYYDPLTHGNRESNRQ 113
[Close]
BLAST of mRNA_L-elsbetiae_contig1897.5574.1 vs. uniprot
Match: D7G069_ECTSI (Non-structural maintenance of chromosomes element 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G069_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 8.810e-14
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0 
Query:    1 MSFTKADFDELKELYNMEGSHIPHRNDGPRSDYYDPLRDGNRESNRQ 47
            MSFT ADF ELKELY ME S+  HR++GP+SDYYDPL  GNRESNRQ
Sbjct:  399 MSFTPADFRELKELYGMEESNFEHRSEGPKSDYYDPLTHGNRESNRQ 445
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1897.5574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPS6_9PHAE2.130e-1574.47Non-structural maintenance of chromosomes element ... [more]
D7G069_ECTSI8.810e-1474.47Non-structural maintenance of chromosomes element ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1897contigL-elsbetiae_contig1897:10481..11396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1897.5574.1mRNA_L-elsbetiae_contig1897.5574.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1897 8963..11546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1897.5574.1 ID=prot_L-elsbetiae_contig1897.5574.1|Name=mRNA_L-elsbetiae_contig1897.5574.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=48bp
MSFTKADFDELKELYNMEGSHIPHRNDGPRSDYYDPLRDGNRESNRQ*
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