prot_L-elsbetiae_contig1895.5567.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1895.5567.1
Unique Nameprot_L-elsbetiae_contig1895.5567.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length60
Homology
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BLAST of mRNA_L-elsbetiae_contig1895.5567.1 vs. uniprot
Match: A0A6H5JH57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH57_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.110e-8
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0 
Query:   20 HLRNFAVSADERRQMEEDYRLALTMQRGGVAGAAGDRG 57
            HLRNFAV+ADERRQMEEDYRLAL MQ+G  A A G  G
Sbjct:   28 HLRNFAVTADERRQMEEDYRLALAMQKGEAAAANGTGG 65
[Close]
BLAST of mRNA_L-elsbetiae_contig1895.5567.1 vs. uniprot
Match: D8LDG4_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG4_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 7.620e-8
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:   20 HLRNFAVSADERRQMEEDYRLALTMQRGGVAGAAG 54
            HLRNFAV+ADERRQMEEDYRLAL MQ+G  A A G
Sbjct:  378 HLRNFAVTADERRQMEEDYRLALAMQKGEAAVANG 412
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1895.5567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JH57_9PHAE1.110e-876.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDG4_ECTSI7.620e-880.00FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1895contigL-elsbetiae_contig1895:21578..21757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1895.5567.1mRNA_L-elsbetiae_contig1895.5567.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1895 21326..21757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1895.5567.1 ID=prot_L-elsbetiae_contig1895.5567.1|Name=mRNA_L-elsbetiae_contig1895.5567.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=60bp
MEMRGQEFTSPSSSWRRKYHLRNFAVSADERRQMEEDYRLALTMQRGGVA
GAAGDRGEM*
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