prot_L-elsbetiae_contig1889.5545.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1889.5545.1
Unique Nameprot_L-elsbetiae_contig1889.5545.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1520
Homology
BLAST of mRNA_L-elsbetiae_contig1889.5545.1 vs. uniprot
Match: D8LEE2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE2_ECTSI)

HSP 1 Score: 912 bits (2356), Expect = 1.110e-298
Identity = 752/1586 (47.41%), Postives = 835/1586 (52.65%), Query Frame = 0
Query:    1 KAGDVDAALDLMSGMEACEGFSGASEYNQIIAACGRGGDWQRAVSTLGRIRRTGAAPDAHSFAMAXXXXXXXXXXXXXXXXXXXXXXXGGGVRPNTVVYNTLLGLCKGRPLRGGRGRGGAREGASAAAVAR-----TGENLNGYGGGRGVRRVNXXXXXXDGVAGGLPESRAVRISGNTVGTGGVRAGVGGASGWGDKPEELVATAVTLLHEMTVGGGECAPDKMSFELVMQACVNAGRPESALKVFRAMTRWATEGVSSTGEAFDAGAAXXXXXXXXXXXXXXXXXAVGVRPDRATYRLGLTAAAEAGDGAAAAVLLEEMLGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLLREARPVLRQAFLSPPXXXXXXXXXXXXXPRASEEGGRKRTGSVVAAYTLAMAACRRADRHADGLQVLSMLEEDGGRGNEEFFRVALKCXXXXXXXXXXXXXXXXXXXXXXXAAVADRVLEDMSAQGIRCRVEGFTDVAQAYGVAGRWEDALALLSRAAVVPEENGEEPAGDAVVPDERMYCSVINXXXXXXXXXXXVELVQSMRRSPSTSSPSPQLLAGXXXXXXXXXXXXXXXXXXXXXXXXXPGRAAYACACRACARQGEWGAVLALMEDMRDDGVPRDAXXXXXXXXXXXXXXXXERAVSIVTTEMELDGVAPDIISYNQALKACRAGADGGGQAAQRALELTAEVRSKRLGLDVVTLEAAARSCLADGRPEFGFDLVSEALESWRQGSLGGGXXXXXXXXGVSRRPEERIDAGDAGDARRGWAPEEVQRLETMRILLLGRMGRWEESLQVLDAMKARFGER-VDGRAFVSAAHACAAAGEWALVQVLQTEASXXXXXXXXXXXXXXXXXAGVPPGAAWNMQRALLSGLATAGVWERAVAVLRDMHGYRGGVGAGGEGERGAVVVGEDRVLRSGRVRDGRGGVRGMGMGMADPSLHWQRRMLKDYRTVMHACLRAGAWDEALSVWSELRARPDRPRPCARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------VSAAAVADDRASDEDTALSGRG-WGDGGEGRVGGDEEGAXXXXXXXXXXXGGGDTALRVVLSEMAAGGA---RLGWEAYAAVCWARSQQKHWHRASLGVLELIGECGLEEDASAPAIDQQQQQQRAEGMRSLYGRLLTAAGKIPGCV---GEEPRKGAAAHAVRQILADAEERLAALPGGPGPHVIAAAAVGFARAGDWESARDVALRFSPSSRDEEXXXXXXXXXXXXXXXXXXXXXXXXLLSSSSSAFRRGAADAXXXXXXXXXXXXXXXARAGELEEAEALAE----------------------------------------------ELGFGQEAGLALATAYERAGRPYDAEALRSRLQGRAAISLGLDEADGVEGRSKEQPERVDVPAGLLPNVGGPSGLMASALD-DGRTGLDDGLGGGADHQYDLFLQWMATGEEDEXXXXXXXXXXXXXXXXXGAWSGDELWGPAAEDGGMVGSRAGAPVERGSEEGLTIRELEGW 1519
            KAGDV AALDLM GME CEGF GA E                                       XXXXXXXXXXXXXXXXXXXXXXX  GVRPNTVVYNTLL LC+G+PLRG RG                    TG NLNGYGG  G+  VN       GVA G+P+ RA+R         GV    GG  G  ++P+ELV TAV LLHEMTVGG ECAPDKMSFELVMQACVNAGRPESALKVFRAM R A         A      XXXXXXXXXXXXX    AV VRPDRAT+RLGLTAAAEAGDG AAAVLLEEM  AG                                                          AL LL+  RPVL+Q   S P               A  E  R+  G+VVAAYTLAM ACRR+ RH++GL+VL MLEEDGG G+E FFRVALKC                       AAVADRVLE MSAQGIRC VEGFTD+AQAYG+AGRWEDALALL RAA +           A VPDERMYCSVIN           VEL+QSMRR    S         XXXXXXXXXXXXXXXXXXX      PGRAAY CACRACAR+GEWGAVL L+EDMR+DG+ RD+                ERAV IVT EME DGV+PD +S+ QAL+ACRAGADG G+AAQ AL L  EVRS+ L   VV LE+AAR+CLAD RPE   D+VSE L+SWR+GSLGG                     GD G  RR W  +EVQRLETMRI +LGR+GRWE+SL+ LDAM+A+FG+  +D RAFVSAA ACAAAGEW+L+QVLQ+EAS                  GV PG+AW+MQRALLSGL TAG+W RA+ +LR+MH        GG G+      GE+R                 G GM DPS HWQRRM KD+R+VMHACLRAGAWD+ALSVWS+LR+  + P PC RT                                                VSAA VADD +S E+  LSGRG WG GG   V                  G G+ ALR VLS+MAAGG     +GWE YAAVCWARSQ+K WHRASLGVLEL+GE G  + A          ++ AEGMRSLY RLL AA KIP                                        V+AAAA  FARAGDWE ARD+A+RF P                                +   SA RR  ADA               ARAGEL EAEALAE                                               LGF   AG+ALA AYERAGR  DAE LRSRLQGR A SLGL+EA GVEG     P    VP   LP+VGG S       + D  T             YDLFLQWMATG    XXXXXXXXXXXXXXXXX                         P     EEGLTIRELEGW
Sbjct:  463 KAGDVGAALDLMDGMENCEGFRGAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRPNTVVYNTLLALCRGKPLRGVRGGXXXXXXXXXXXXXXXXXDGTGPNLNGYGGXGGLEEVNGH-----GVAVGMPDGRAIRN--------GVSVPGGGTVGSRERPDELVGTAVALLHEMTVGGSECAPDKMSFELVMQACVNAGRPESALKVFRAMARVA---------AGXXXXXXXXXXXXXXXXXXGRGRAVEVRPDRATFRLGLTAAAEAGDGPAAAVLLEEMRDAGIAMDESAFHLAATAFGRAGLWRQGVRVAVVAAEQGIALAPTTLTSILGACAKQARWREALGLLQGTRPVLQQGLSSLPLSTGAGVV-------AGNE--RRGEGNVVAAYTLAMVACRRSGRHSEGLRVLEMLEEDGGVGDEAFFRVALKCCAKAGGVGERGDCSG--------AAVADRVLEGMSAQGIRCGVEGFTDIAQAYGLAGRWEDALALLPRAAAL-----------AAVPDERMYCSVINAMGESGAWEAAVELIQSMRRR-RPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLEPPPPGRAAYGCACRACARKGEWGAVLGLIEDMREDGLERDSSVYASAMRAFVEAGDWERAVEIVTVEMERDGVSPDALSFGQALRACRAGADGSGRAAQLALALVGEVRSRGLEPGVVILESAARACLADDRPELALDIVSETLDSWRRGSLGGD--------------------GDGGGGRR-WGIDEVQRLETMRITVLGRLGRWEDSLEALDAMRAKFGDDDLDERAFVSAARACAAAGEWSLIQVLQSEASAVGDGD------------GVSPGSAWDMQRALLSGLTTAGMWRRAMGMLREMH-------HGGGGDTVMPAAGEER-----------------GQGMPDPSPHWQRRMFKDHRSVMHACLRAGAWDKALSVWSDLRSIVEGPIPCGRTYTAALRACGPLGLWATARDLLSEMRDGAEGAEGDGLLLLPEARHYAFAVSAATVADDISSYEEATLSGRGGWGAGGSDAV-------------VDGDGGSGNAALRSVLSDMAAGGGGGVEIGWETYAAVCWARSQRKQWHRASLGVLELMGEHGFGDGALGT-------EEAAEGMRSLYRRLLAAASKIPRFATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAAAATAFARAGDWEGARDIAVRFDPRVGGPTAGGASSG-------------------TGEPSAVRRRTADAAAVVSVAVAAT----ARAGELVEAEALAELARVIATTAEVSASSSGXXXXXXXSRSRGSDGEEARVSRGTERSNNPLGFDHRAGVALADAYERAGRLSDAEGLRSRLQGRMASSLGLEEAAGVEGGVAAAPAASAVPR--LPSVGGHSRRRRPLAEGDESTWPXXXXXXXXXXXYDLFLQWMATGXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXVAGPPRESDEEGLTIRELEGW 1882          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1889.5545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEE2_ECTSI1.110e-29847.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 1026..1054
e-value: 0.35
score: 11.2
coord: 224..247
e-value: 0.096
score: 13.0
coord: 990..1014
e-value: 0.062
score: 13.6
coord: 27..52
e-value: 1.0
score: 9.8
coord: 562..589
e-value: 0.022
score: 15.0
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 66..108
e-value: 5.5E-4
score: 19.9
coord: 652..711
e-value: 4.9E-6
score: 26.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 629..663
score: 8.002
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 289..323
score: 7.004
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 218..252
score: 8.616
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 814..844
score: 5.229
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 58..92
score: 9.24
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 559..589
score: 8.594
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 986..1020
score: 8.824
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 359..389
score: 6.752
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1321..1351
score: 5.546
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 740..770
score: 5.404
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 903..933
score: 5.02
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 324..358
score: 6.873
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 426..460
score: 5.831
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1023..1057
score: 7.947
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 664..699
score: 9.778
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 23..57
score: 9.164
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 429..597
e-value: 1.7E-16
score: 62.5
coord: 183..268
e-value: 4.4E-5
score: 25.0
coord: 624..789
e-value: 2.0E-20
score: 75.4
coord: 279..408
e-value: 5.5E-16
score: 60.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..126
e-value: 3.4E-19
score: 71.5
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 498..589
coord: 200..386
coord: 632..758
coord: 1..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1889contigL-elsbetiae_contig1889:13803..22398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1889.5545.1mRNA_L-elsbetiae_contig1889.5545.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1889 13803..22398 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1889.5545.1 ID=prot_L-elsbetiae_contig1889.5545.1|Name=mRNA_L-elsbetiae_contig1889.5545.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1520bp
KAGDVDAALDLMSGMEACEGFSGASEYNQIIAACGRGGDWQRAVSTLGRI
RRTGAAPDAHSFAMAMTACARSGEPRQALRLLDELKREGGGVRPNTVVYN
TLLGLCKGRPLRGGRGRGGAREGASAAAVARTGENLNGYGGGRGVRRVNG
NGGGGDGVAGGLPESRAVRISGNTVGTGGVRAGVGGASGWGDKPEELVAT
AVTLLHEMTVGGGECAPDKMSFELVMQACVNAGRPESALKVFRAMTRWAT
EGVSSTGEAFDAGAAAAAGGRGRGGEGGGRGRAVGVRPDRATYRLGLTAA
AEAGDGAAAAVLLEEMLGAGVTIDESSYRLAATAFGRAGLWRQGVRLTGM
AAKAGIPLSPSALTSILAACAKQSRWREALHLLREARPVLRQAFLSPPPE
DKRAVVVGGAGPRASEEGGRKRTGSVVAAYTLAMAACRRADRHADGLQVL
SMLEEDGGRGNEEFFRVALKCCAKAAAGGGGGEGGEEGSRSSGGAAVADR
VLEDMSAQGIRCRVEGFTDVAQAYGVAGRWEDALALLSRAAVVPEENGEE
PAGDAVVPDERMYCSVINAMGVSGAWKEAVELVQSMRRSPSTSSPSPQLL
AGGDGGGTDEKDASCAAAAAPIVETPPPGRAAYACACRACARQGEWGAVL
ALMEDMRDDGVPRDAAVYAAAMRAFVEAGEWERAVSIVTTEMELDGVAPD
IISYNQALKACRAGADGGGQAAQRALELTAEVRSKRLGLDVVTLEAAARS
CLADGRPEFGFDLVSEALESWRQGSLGGGGGRGEGGGGVSRRPEERIDAG
DAGDARRGWAPEEVQRLETMRILLLGRMGRWEESLQVLDAMKARFGERVD
GRAFVSAAHACAAAGEWALVQVLQTEASAAAAAAAAAAAAAGDGDAGVPP
GAAWNMQRALLSGLATAGVWERAVAVLRDMHGYRGGVGAGGEGERGAVVV
GEDRVLRSGRVRDGRGGVRGMGMGMADPSLHWQRRMLKDYRTVMHACLRA
GAWDEALSVWSELRARPDRPRPCARTYATALRACGALGLWTAALELLSEM
TAAGGDLSPEARHYAFAVSAAAVADDRASDEDTALSGRGWGDGGEGRVGG
DEEGAEGGGAGGELGDGGGDTALRVVLSEMAAGGARLGWEAYAAVCWARS
QQKHWHRASLGVLELIGECGLEEDASAPAIDQQQQQQRAEGMRSLYGRLL
TAAGKIPGCVGEEPRKGAAAHAVRQILADAEERLAALPGGPGPHVIAAAA
VGFARAGDWESARDVALRFSPSSRDEEEEDHAADIDVAGAGAGSGGGGNG
ELLSSSSSAFRRGAADATSATASAAGAAIAACARAGELEEAEALAEELGF
GQEAGLALATAYERAGRPYDAEALRSRLQGRAAISLGLDEADGVEGRSKE
QPERVDVPAGLLPNVGGPSGLMASALDDGRTGLDDGLGGGADHQYDLFLQ
WMATGEEDEEEVEDADAGVDAGAGAGGAWSGDELWGPAAEDGGMVGSRAG
APVERGSEEGLTIRELEGW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf