prot_L-elsbetiae_contig1885.5535.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1885.5535.1
Unique Nameprot_L-elsbetiae_contig1885.5535.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length466
Homology
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Match: D8LNG9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG9_ECTSI)

HSP 1 Score: 562 bits (1448), Expect = 3.580e-196
Identity = 336/480 (70.00%), Postives = 360/480 (75.00%), Query Frame = 0
Query:    1 MDDIANIRRRRLERLA-GSPAPVAAGEDDRKNSGGTGEQPKTTTQD------SIPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRALANKSQCPMCRAACLGGAGDCGTNLAMVSIIKSQFSRQYXXXXXXXXXXXXXXXEARRRARTIGESVTPAPDGSVSMPVCLLDMVLFPHQPVTLYLFEARYIVLVNRCLSSTRRFAVFQDRTPSTGSCGSILEISDARMMNRGHYLVMCRGVGSRCTSSAEFETEEGTSGLRYARVSPFEDDDEAVTGSDPDGGVDGSGDSGVRGRTADEVLGPELKDLADRTAVVVSDCLARLSTRQRVSLVRRCGEPPKVGNSSLNSYRKLSYWLPSALALSXXXXXXXXXXXXXXXXXXXXDARERR----AAMFRSRSLRQRLSEACQAVMESEAVRGSTVARRKRGLRRLFAAPGDGAGGGG-----RAHGFLSSTRNSVILIVGIFAAMVAYQRFAK 464
            M D+ NIRRRRLE L   SPA   A      +SGGT +       D      +IPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRALANK+QCPMCRAAC  GAGDCGTNLAMVSIIKSQF RQY               E RRRA TIGESVTPAPDGSV MPVCLLDM+LFP QPVTLYLFE RYI +VNRCLSSTRRFAVFQD++PSTG  G+ILEISDARMMNRG YL+MCRGVG RC SSAEFE E GT GLR+ARVSPFEDD                     R  TADEVLGPEL+DLADRT+VVV DCLARLSTRQ++SL+RRCGEPPKVG SSLNSYRKLSYWLPSALAL+    XXXXXXXXXXXXXXXX          AAMFR+RSLRQRLSEAC+ VMESEAV GST +RR+RGLR+LFA P  G             GFLSSTRNSVILIVGIFAAMVAYQR +K
Sbjct:    1 MADVTNIRRRRLEALEESSPAAAGASPALEVDSGGTTKAAARNAPDDEATACTIPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRALANKTQCPMCRAACHLGAGDCGTNLAMVSIIKSQFGRQYEERENEAEHDAMVEAETRRRAHTIGESVTPAPDGSVLMPVCLLDMLLFPLQPVTLYLFEPRYITMVNRCLSSTRRFAVFQDQSPSTGLSGAILEISDARMMNRGQYLIMCRGVG-RCNSSAEFEVEAGTGGLRHARVSPFEDDXXXXXXXXXXXXXXXXX---XRRVTADEVLGPELRDLADRTSVVVFDCLARLSTRQKISLIRRCGEPPKVGRSSLNSYRKLSYWLPSALALADAGGXXXXXXXXXXXXXXXXXXXXXXXXXXAAMFRNRSLRQRLSEACEVVMESEAVTGSTSSRRERGLRKLFAPPPSGLXXXXXXXXXHGQGFLSSTRNSVILIVGIFAAMVAYQRISK 476          
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Match: A0A6H5L2U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U3_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 1.330e-78
Identity = 169/237 (71.31%), Postives = 182/237 (76.79%), Query Frame = 0
Query:  235 RCTSSAEFETEEGTSGLRYARVSPFEDDDEAVTGSDPDGGVDGSGDSGVRGRTADEVLGPELKDLADRTAVVVSDCLARLSTRQRVSLVRRCGEPPKVGNSSLNSYRKLSYWLPSALALSXXXXXXXXXXXXXXXXXXXXD---ARERRAAMFRSRSLRQRLSEACQAVMESEAVRGSTVARRKRGLRRLFAAPGDGAGGGG---RAHGFLSSTRNSVILIVGIFAAMVAYQRFAKV 465
            RC SSAEFE E GT GLRYARVSPFEDD                     R  TADEVLGPEL DLADRT+VV+ DCLARLSTRQ++SL+RRCGEPPKVG SSLNSYRKLS+WLPSALAL+   XXXXXXXXXXXXXXXXX    ARERRAAMFR+RSLRQRLSEAC+ VMESEAV GST +RR+RGLR+LFA P  G           GFLSSTRNSVILIVGIFAAMVAYQR +KV
Sbjct:   16 RCNSSAEFEVEAGTGGLRYARVSPFEDDXXXXXXXXXXXXXXXXX---XRRVTADEVLGPELMDLADRTSVVIFDCLARLSTRQKISLIRRCGEPPKVGRSSLNSYRKLSFWLPSALALADVGXXXXXXXXXXXXXXXXXXVAXARERRAAMFRNRSLRQRLSEACEVVMESEAVTGSTSSRRERGLRKLFAPPPSGLXXXXXXXHGQGFLSSTRNSVILIVGIFAAMVAYQRISKV 249          
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Match: A0A835YVY5_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY5_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.190e-49
Identity = 105/263 (39.92%), Postives = 141/263 (53.61%), Query Frame = 0
Query:   47 IPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRALANKSQCPMCRAACLGGAGDCGTNLAMVSIIKSQFSRQYXXXXXXXXXXXXXXXEARRRARTIGESVTPAPDGSVSMPVCLLDM--VLFPHQPVTLYLFEARYIVLVNRCLSSTRRFAVFQDRTPSTGSCGSILEISDARMMNR-----------------------------------GHYLVMCRGVGSRCTSSAEFETEEGTSGLRYARVSPFEDDDEAVTGSDPD 272
            IPS+FEC LCLRL++EPVS+ CGH+YCRGCL+RAL  K+ CP+CRA    GA D   NLAMVS I+   + +Y                A +RA T+GE  T  PDGSV M V  +D   ++FP QP+TL+++E +Y+++V RCLS  RRF +   R    GS G++++I DARM+ R                                   G YL+   GVG RC   +    E    GLR A + P +DDD+A  G+  D
Sbjct:   82 IPSDFECSLCLRLFYEPVSIACGHSYCRGCLRRALRFKASCPICRAPLHAGAADAAANLAMVSFIQRDCAAEYAARAREAAADAAEEAAAAKRALTLGEDATLLPDGSVQMEV-FVDRYSLVFPGQPITLFVYEPQYVIMVTRCLSGGRRFVM--QRAAERGSVGTVVQIDDARMLGRLWMPETVSTRAASALRSAPPLQRSDPPSELRGRGGGQYLLQAHGVG-RCVCVSALVAEAEAHGLRSASIVPLDDDDDAPDGTAAD 340          
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Match: A0A7S2XUD8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUD8_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.510e-37
Identity = 124/431 (28.77%), Postives = 186/431 (43.16%), Query Frame = 0
Query:   45 DSIPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRALANKSQCPMCRAACLGGAGDCGTNLAMVSIIKSQFSRQYXXXXXXXXXXXXXXXEARRRARTI---------GESVTPAPDGSVS--MPVCLLDMVLFPHQPVTLYLFEARYIVLVNRCLSSTRRFAVFQDRTPST-GSCGSILEISDARMMNRGH--YLVMCRGVGSRCT--SSAEFETEEGTSGLRYARVSPFEDDDEAVTGSDPDGGVDGSGDSGVRGRTADEVLGPELKDLADRTAVVVSDCLARLSTRQRVSLVRRCGEPPKVGNSSLNSYRKLSYWLPSALALSXXXXXXXXXXXXXXXXXXXXDARERRAAMFRSRSLRQRLSEACQAVMESEAVRGSTVARRKRGLRRLFA--APGDGAGGGGRAHGFLSSTRNSVILIVGIFAAMV 457
            + +P E EC LCL+L +EPVSLPCGH++CR CL+RAL  K +CP+CRAACL GA     N+A+ +   S+  + +               +A  +A  +           +  P     VS  +P+ L  + L PHQP+    FE RY+V+V R L+  R F +    +    G  G ++ +   + +   H  Y+V  + V SR T    +    E GT GL YA V P++D  +                        D  L P +K+L+     + S  L  L    +  L+  CG  P  G      +++LS+WL SAL L                             + R+R L  R+ +    V    A R     RR RG   +F   APG  AG         SS+R S++L++G+  ++V
Sbjct:   18 EEVPQELECTLCLKLLYEPVSLPCGHSFCRRCLRRALTYKKECPLCRAACLPGAASNAVNIALETFASSRLPKAWAARKQECEEEDDEDRQADAQAARVLSGRSQASPASAAVPEEGSGVSHTVPLFLFPLQLVPHQPMIFQFFEPRYVVMVERLLAGNRLFGLQPSASEDRDGPPGLLMMVEQCQQIPGPHTRYVVQTK-VASRYTIQDPSSIVEEPGTMGLHYATVQPYDDIQD------------------------DASLSPRVKELSLEAWDLTSTLLDSLPNHAKRMLLHMCGPLPSRGQ-----HKRLSFWLASALRLREGEPL----------------------GLLRTRDLEMRVRQ----VSGLLAKRWEQAQRRSRGAEYVFRNQAPGSQAG-------LFSSSRASLLLLLGLVLSLV 385          
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Match: A0A7S1G500_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G500_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.240e-25
Identity = 72/214 (33.64%), Postives = 109/214 (50.93%), Query Frame = 0
Query:   49 SEFECILCLRLYHEPVSLPCGHTYCRGCLKRALANKSQCPMCRAACLGGAGDCGTNLAMVSIIKSQFSRQYXXXXXXXXXXXXXXXEARRRARTIGESVTPAPDGSVSMPVCLLD-MVLFPHQPVTLYLFEARYIVLVNRCLSSTRRFAVFQDRTPSTGSCGSILEISDARMMNRGHYLVMCRGVGSRCTSSAEFETEEGTSGLRYARVSPFED 261
            ++F+C +C  L  EPV+L CGHTYCR CL+ AL     CPMCRA     A +   N+ +  +I+ +F  +                 A RRA    E      D    +P+ + + ++++P QPVT  +FE RY ++V RC+  +RRF +   +T    + G ++EI+  R ++ G   + CR   SR  + A    EEGT GL YA +   ED
Sbjct:   26 ADFDCSICFNLLLEPVTLGCGHTYCRRCLRNALRVNRHCPMCRAPTYVAANEQPANVLLTRLIERKFPAEL----------------AARRAEEAEEVREAEAD---RLPIFVQEGLLVYPTQPVTFNIFEPRYRIMVQRCMEGSRRFGL---QTTPASTVGVVVEINSVRQVSVGVLQIGCRA-RSRYRTRATAAVEEGTGGLLYADIELLED 216          
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Match: A0A6B2LCC5_9EUKA (RING-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LCC5_9EUKA)

HSP 1 Score: 102 bits (253), Expect = 1.340e-20
Identity = 65/218 (29.82%), Postives = 103/218 (47.25%), Query Frame = 0
Query:   51 FECILCLRLYHEPVSLPCGHTYCRGCLKRALAN-KSQCPMCRAACLGGAGDCGTNLAMVSIIKSQFSRQYXXXXXXXXXXXXXXXEARRRARTIGESVTPAPDGSVSMPVCLLDMVLFPHQPVTLYLFEARYIVLVNRCLSSTRRFAV---FQDRTPSTGSCGSILEISDARMMNRGHYLVMCRGVGSRCTSSAEFETEEGTSGLRYARVSPFEDDDE 264
             +C +CL +  EP+S+PCGHT+CR CL  A    + +CP+CRA C+  A     N+ + SI+K+ F +QY                    A  + E          ++P+   +  LFP   + L+LFE RY +++ R L   R+F     F +   S G  G + E+ + R ++ G  L+  R V       A+   E+GT  L Y +   F+D+ E
Sbjct:    1 MDCTICLNMLVEPISVPCGHTFCRTCLVAAQQRAQKKCPVCRAVCVIDATAQKENVQLASILKTCFPKQY--------------------AERLKEVEETKKTWKQNLPIFFFNDTLFPGGVLKLHLFEERYKLMIKRVLEGNRKFVYLPNFTNYKASKGDVGVVAEVLECRFLHDGRALLQARIVERAVV--ADSWVEDGTGNLAYCQYELFKDEPE 196          
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Match: A0A7S0CSC1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSC1_9EUKA)

HSP 1 Score: 100 bits (250), Expect = 5.530e-20
Identity = 65/224 (29.02%), Postives = 106/224 (47.32%), Query Frame = 0
Query:   51 FECILCLRLYHEPVSLPCGHTYCRGCLKRALAN-KSQCPMCRAACLGGAGDCGTNLAMVSIIKSQFSRQYXXXXXXXXXXXXXXXEARRRARTIGESVTPAPDGSVSMPVCLLDMVLFPHQPVTLYLFEARYIVLVNRCLSSTRRFAV---FQDRTPSTGSCGSILEISDARMMNRGHYLVMCRGVGSRCTSSAEFETEEGTSGLRYARVSPFEDDDEAVTGSD 270
             +C LCL +  EP+++PCGHT+CR CL  A+   K +CP CRA C         N+ + +I +  F ++Y                 ++RA    E          ++P+   +  LFP   + L+LFE RY  ++NRC+SS R+F     F D   + G  G +  + +   ++ G  L+    V     +++    EEGT GL Y +   +E+ D+ V  +D
Sbjct:   30 LQCSLCLGIVCEPITIPCGHTFCRSCLYLAMQRTKKKCPNCRAVCHVDPSSHSVNVMLANIAQKCFPKEY-----------------KKRAE---ECKALKQKFQTTLPIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRQFLYLPNFSDYKATAGDVGLLAYVDECEFLSDGRALLKATLVKRVVITNSW--VEEGTQGLHYCQYQAYEETDKTVKEAD 231          
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Match: A0A250WWE3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWE3_9CHLO)

HSP 1 Score: 103 bits (257), Expect = 5.640e-20
Identity = 97/332 (29.22%), Postives = 150/332 (45.18%), Query Frame = 0
Query:   50 EFECILCLRLYHEPVSLPCGHTYCRGCLKRALANKSQCPMCRAACLGGAGDCGTNL----AMVSIIKSQFSRQYXXXXXXXXXXXXXXXEARRRARTIGESVTPAPDGSVSMPVCLLDMVLFPHQPVTLYLFEARYIVLVNRCLSSTRRFAVFQDRTPSTGSCGSIL---EISDARMMNRGHYLVMCRGVGS-RCTSSAEFETEEGTSGLRYARVSPFEDDDEAVTGSDP------DGGVDGSG----DSGVRGRTADEVLGPELKDLADRTAVVVSDCLARLSTRQRVSLVRRCGEPPKVGNSSLNS------------YRKLSYWLPSAL 351
            + EC LC++L  EPV+ PCGHT+CRGC  RA+ + ++CP+CR         CG  L     + +II   F+ +Y          XXXXX     +    E V    DG++++P+ ++  +L P + + L +FE RY +++ R +   RR  + + R+ S  S   +L   EI +      G Y V   G    +  SS++ +      G R ARV PF DD E             +GG  G G    + G+    A+EVL    +  +   A+  +   A    R+   L+ R G+PP + N    S            Y KLS+W  + L
Sbjct:  216 DLECTLCMKLLFEPVTTPCGHTFCRGCYARAMDHGNKCPLCRTVL-----HCGRQLPVTVTLANIISRSFTEEYEERRAEEVAEXXXXXXXXSSSGQWDEGV--GSDGTLTLPLFVMSTLL-PGEKMGLNIFEPRYRLMIRRAMEGNRRIGMAEARSRS--SIEEVLIEVEIQECNPQPDGRYYVEVEGRRRMKLVSSSDLD------GYRLARVKPFRDDVEEAAEQXXXXXXXAEGGEQGEGAVQREPGIV-TLANEVLTSATEATSQLRAMASASPRAAARVRE---LLSRVGQPPTLPNHPSGSAEGGDSAARQLAYEKLSFWAANLL 527          
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Match: A0A6U2J5U5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2J5U5_HEMAN)

HSP 1 Score: 100 bits (248), Expect = 6.710e-20
Identity = 71/214 (33.18%), Postives = 98/214 (45.79%), Query Frame = 0
Query:   49 SEFECILCLRLYHEPVSLPCGHTYCRGCLKRALA-NKSQCPMCRAACLGGAGDCGTNLAMVSIIKSQFSRQYXXXXXXXXXXXXXXXEARRRARTIGESVTPAPDGSVSMPVCLLDMVLFPHQPVTLYLFEARYIVLVNRCLSSTRRFAV---FQDRTPSTGSCGSILEISDARMM--NRGHYLVMCRGVGSRCTSSAEFETEEGTSGLRYARV 256
            S  EC +CL+L  EPV+ PCGH++CR CL   L  NK +CP CRA C          +A+ S+ K+ F + Y                     + I E           +P+   +  LFP  P+ L LFE RY V+++R + S+RRFA    F     + G  G I EI+D   +   R H    CR    R T   E   E+GT GL + +V
Sbjct:   12 SMLECSVCLQLLCEPVTTPCGHSFCRPCLVGTLRKNKKKCPSCRAICQIEPETHSETIALSSVAKAVFPKAYQ--------------------QRILEVQAEKASWDTILPIFFYNDTLFPFSPLALNLFEPRYKVMLHRIVESSRRFAYLPKFDTYQANVGDMGVIAEITDIEFLADGRAHLQAKCR---DRFTIK-EAWIEDGTQGLHWCKV 201          
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Match: A0A6V3MPG8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3MPG8_9EUKA)

HSP 1 Score: 99.8 bits (247), Expect = 1.600e-19
Identity = 69/233 (29.61%), Postives = 104/233 (44.64%), Query Frame = 0
Query:   41 TTTQDSIPSEFE---CILCLRLYHEPVSLPCGHTYCRGCLKRALA-NKSQCPMCRAACLGGAGDCGTNLAMVSIIKSQFSRQYXXXXXXXXXXXXXXXEARRRARTIGESVTPAPDGSVSMPVCLLDMVLFPHQPVTLYLFEARYIVLVNRCLSSTRRFAV---FQDRTPSTGSCGSILEISDARMMNRGHYLVMCRGVGSRCTSSAEFETEEGTSGLRYARVSPFEDDDEAV 266
            TT   S   E +   C LCL L  +P+++PCGHT+CR CL  A+  +K +CP CRA C         N+ +  I +  F +QY                     + + ES         + P+   +  LFP   + L+LFE RY  ++NRC+SS R+F     F D    TG  G +  I +   +  G  L+  +    +         EEGT GL Y +  P+ ++D+ V
Sbjct:   20 TTASSSASIEADMLTCPLCLNLVCQPITVPCGHTFCRVCLYMAMQRSKKKCPNCRAVCHVEPASHAVNVMLAQIAQKCFPKQYE--------------------QRLLESKQEQEKFESTSPIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRKFIYLPNFTDYKAKTGDVGLLAYIDECEFLPDGRALL--KATIQKRVKVTNTWVEEGTQGLHYCQFHPYVEEDKTV 230          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1885.5535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNG9_ECTSI3.580e-19670.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L2U3_9PHAE1.330e-7871.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVY5_9STRA1.190e-4939.92RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2XUD8_9STRA2.510e-3728.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1G500_9STRA1.240e-2533.64Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6B2LCC5_9EUKA1.340e-2029.82RING-type domain-containing protein n=1 Tax=Arcell... [more]
A0A7S0CSC1_9EUKA5.530e-2029.02Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A250WWE3_9CHLO5.640e-2029.22Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A6U2J5U5_HEMAN6.710e-2033.18Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A6V3MPG8_9EUKA1.600e-1929.61Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003111Lon, substrate-binding domainSMARTSM00464lon_5coord: 156..402
e-value: 0.0092
score: -16.7
IPR003111Lon, substrate-binding domainPFAMPF02190LON_substr_bdgcoord: 158..353
e-value: 6.2E-7
score: 29.5
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 53..90
e-value: 1.9E-7
score: 40.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 53..91
score: 12.829
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 27..142
e-value: 5.7E-20
score: 73.3
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 52..90
e-value: 5.6E-9
score: 35.7
NoneNo IPR availableGENE3D2.30.130.40coord: 143..257
e-value: 4.0E-14
score: 54.3
NoneNo IPR availablePANTHERPTHR23327:SF42ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEINcoord: 31..261
NoneNo IPR availablePANTHERPTHR23327RING FINGER PROTEIN 127coord: 31..261
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 463..465
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..444
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 445..462
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 45..113
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 68..77
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 157..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1885contigL-elsbetiae_contig1885:7400..18092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1885.5535.1mRNA_L-elsbetiae_contig1885.5535.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1885 7400..18228 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1885.5535.1 ID=prot_L-elsbetiae_contig1885.5535.1|Name=mRNA_L-elsbetiae_contig1885.5535.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=466bp
MDDIANIRRRRLERLAGSPAPVAAGEDDRKNSGGTGEQPKTTTQDSIPSE
FECILCLRLYHEPVSLPCGHTYCRGCLKRALANKSQCPMCRAACLGGAGD
CGTNLAMVSIIKSQFSRQYKEREKEAEQDAVVDAEARRRARTIGESVTPA
PDGSVSMPVCLLDMVLFPHQPVTLYLFEARYIVLVNRCLSSTRRFAVFQD
RTPSTGSCGSILEISDARMMNRGHYLVMCRGVGSRCTSSAEFETEEGTSG
LRYARVSPFEDDDEAVTGSDPDGGVDGSGDSGVRGRTADEVLGPELKDLA
DRTAVVVSDCLARLSTRQRVSLVRRCGEPPKVGNSSLNSYRKLSYWLPSA
LALSAAAAAAAGGGGGGGSGSGGGDARERRAAMFRSRSLRQRLSEACQAV
MESEAVRGSTVARRKRGLRRLFAAPGDGAGGGGRAHGFLSSTRNSVILIV
GIFAAMVAYQRFAKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003111Lon_substr-bd
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR015947PUA-like_sf