prot_L-elsbetiae_contig18750.5488.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18750.5488.1
Unique Nameprot_L-elsbetiae_contig18750.5488.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length54
Homology
BLAST of mRNA_L-elsbetiae_contig18750.5488.1 vs. uniprot
Match: D8LPZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPZ2_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.550e-18
Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    2 LLRAIRNKYLWLAVSLMFYTFGISGGVFDIIRKPPPFMLNKDGTFGWFHPQ 52
            LLR IRNKYLWLA SL+ YTFGISGGV+DIIR P PFM+ +DG   WFHPQ
Sbjct:  237 LLRVIRNKYLWLATSLLVYTFGISGGVYDIIRNPAPFMVKQDGFIMWFHPQ 287          
BLAST of mRNA_L-elsbetiae_contig18750.5488.1 vs. uniprot
Match: A0A485L545_9STRA (Aste57867_16045 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L545_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.350e-10
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    4 RAIRNKYLWLAVSLMFYTFGISGGVFDIIRKPPPFMLNKDGTFGWFHPQVR 54
            R +R K LWL +S++F+   +SG V+ IIR+PPPF   +DGT  W HPQ R
Sbjct:  212 RRLRRKQLWLVISILFFGLSVSGMVYCIIREPPPFAQERDGTLIWLHPQGR 262          
BLAST of mRNA_L-elsbetiae_contig18750.5488.1 vs. uniprot
Match: A0A0P1AWF5_PLAHL (Magnesium transporter protein 1-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWF5_PLAHL)

HSP 1 Score: 61.6 bits (148), Expect = 9.570e-10
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 VLLRAIRNKYLWLAVSLMFYTFGISGGVFDIIRKPPPFMLNKDGTFGWFHPQVR 54
            ++L  +R K LW+ VSL+FY   +SG V+ IIRKPPPF  ++ G   +FHPQ R
Sbjct:  232 LVLAKLRRKQLWMTVSLLFYGLSVSGMVYCIIRKPPPFASDRAGNIQYFHPQGR 285          
BLAST of mRNA_L-elsbetiae_contig18750.5488.1 vs. uniprot
Match: A0A836CB15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB15_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.270e-8
Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    1 VLLRAIRNKYLWLAVSLMFYTFGISGGVFDIIRKPPPFMLN 41
            ++LR +R+  LWL VSL+ YTF ISG +FDIIR PPPF+++
Sbjct:  100 LVLRVVRSPTLWLVVSLLVYTFSISGAIFDIIRSPPPFVIS 140          
BLAST of mRNA_L-elsbetiae_contig18750.5488.1 vs. uniprot
Match: A0A7S2UY50_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY50_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.020e-8
Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    2 LLRAIRNKYLWLAVSLMFYTFGISGGVFDIIRKPPPFMLN-KDGTFGWFHPQV 53
            ++  +RNK LWL VSL  YT  ISG ++DIIR P PF +N + G   +FHPQ 
Sbjct:  218 IINLLRNKMLWLLVSLGMYTCSISGMIYDIIRNPAPFFMNHQTGQIVFFHPQA 270          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18750.5488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LPZ2_ECTSI1.550e-1874.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A485L545_9STRA1.350e-1050.98Aste57867_16045 protein n=1 Tax=Aphanomyces stella... [more]
A0A0P1AWF5_PLAHL9.570e-1050.00Magnesium transporter protein 1-like n=1 Tax=Plasm... [more]
A0A836CB15_9STRA1.270e-858.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UY50_9STRA3.020e-850.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021149Oligosaccharyl transferase complex, subunit OST3/OST6PFAMPF04756OST3_OST6coord: 3..52
e-value: 1.8E-11
score: 44.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18750contigL-elsbetiae_contig18750:2630..2791 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18750.5488.1mRNA_L-elsbetiae_contig18750.5488.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18750 2630..2791 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18750.5488.1 ID=prot_L-elsbetiae_contig18750.5488.1|Name=mRNA_L-elsbetiae_contig18750.5488.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=54bp
VLLRAIRNKYLWLAVSLMFYTFGISGGVFDIIRKPPPFMLNKDGTFGWFH
PQVR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021149OligosaccharylTrfase_OST3/OST6