prot_L-elsbetiae_contig186.5435.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig186.5435.1
Unique Nameprot_L-elsbetiae_contig186.5435.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length216
Homology
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BLAST of mRNA_L-elsbetiae_contig186.5435.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 3.710e-20
Identity = 66/201 (32.84%), Postives = 93/201 (46.27%), Query Frame = 0 
Query:    8 GKTALAVACRFTNSKSRFAVVRELLGGGASATVADKAGALALHEAAWKGHTDVFALLLSAAPTTISVCNWQGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMAVQRGDETMIRMFLDRKGIDAAGGLGVIPRAMFNALQFNNIKALQMPFNVEGEQKQKDWANAAVNSVTMLHSATMHRSFAGLQMLLSAG 208
            G T L  ACR   +  R+ VVRELL GGA        G +ALH A+++  TDV  LLL  A  T++     G +                                      AVQ G + ++R+ LD  G+DA GGLG +P+A++ A +  + K L M   V GE+ ++ WA    N  T+LH AT   S + +  +LSAG
Sbjct:  115 GHTPLMQACRLFGAADRYVVVRELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGASDNALWSKKGASALVGAVQEGRQEIVRILLDH-GMDAVGGLGAVPKAIWTATRKGHAKILHMLLAVAGEETRRQWATMPYNESTLLHCATSVGSLSVMSAILSAG 314
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig186.5435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JAW5_9PHAE3.710e-2032.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 184..214
e-value: 1100.0
score: 4.7
coord: 44..74
e-value: 3.5
score: 16.6
coord: 112..140
e-value: 11.0
score: 14.9
coord: 78..108
e-value: 2.6
score: 17.0
coord: 7..40
e-value: 24.0
score: 13.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 7..43
score: 8.79
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 49..139
e-value: 2.9E-10
score: 40.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 7..135
score: 24.214
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..213
e-value: 3.4E-28
score: 100.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 5..208
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 8..196
NoneNo IPR availablePANTHERPTHR24178:SF9ANKYRIN REPEAT AND SOCS BOX PROTEIN 3coord: 8..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig186contigL-elsbetiae_contig186:843..1490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig186.5435.1mRNA_L-elsbetiae_contig186.5435.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig186 443..2726 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig186.5435.1 ID=prot_L-elsbetiae_contig186.5435.1|Name=mRNA_L-elsbetiae_contig186.5435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp
MLSTTMYGKTALAVACRFTNSKSRFAVVRELLGGGASATVADKAGALALH
EAAWKGHTDVFALLLSAAPTTISVCNWQGLSALGCATLNDHTEAVSFLLS
AGASDKAIWLEKGLSPLNMAVQRGDETMIRMFLDRKGIDAAGGLGVIPRA
MFNALQFNNIKALQMPFNVEGEQKQKDWANAAVNSVTMLHSATMHRSFAG
LQMLLSAGLISTPKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf