prot_L-elsbetiae_contig1859.5429.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1859.5429.1
Unique Nameprot_L-elsbetiae_contig1859.5429.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length648
Homology
BLAST of mRNA_L-elsbetiae_contig1859.5429.1 vs. uniprot
Match: A0A6H5KH12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH12_9PHAE)

HSP 1 Score: 529 bits (1362), Expect = 2.070e-179
Identity = 312/490 (63.67%), Postives = 349/490 (71.22%), Query Frame = 0
Query:  166 IQPLTKRENRPAARASSSSIGIRLSHNDPRPKNVHGSKRSAGDGMYDIALADKLVMRSTSSCSFRAGAASSSETAIKGISRDTPGAIYDPEIGGSSAIVPATRFSSADRFPVATTTFGNPGPGHYDAVDGAG-------GFGAASWTGVETFVDSEWSRQVEPVPPPSLRPWQGFGSGCSLQEHIDYGACLDGRCCTRHSVERKNALRVVQFLGERGKRREPNLLSSPPSYRHEESGAICSSVHTGAFGP-SASSVDTSGGEGAGGTCYEDVRVAGGKRTPLHFASERGELALVDSRLCYQGDDRNAVDERGYTXXXXXXXXXXXXVVDRLLQGDEENAAPLVGEATRARGAPPERPRQVPADPNAQDNNGRTPLYLACLRGHERAVRALLKAGASPDVLDKRGKPAQEVAGAQRIYQLLQYKADVSLVKANIAALEEREHTAERHRREAEQARALRELAELKAEELRLREAVDALEAKRIAYARAAKVQ 647
            I PL K E RP AR+SSSS G+RLS+N+PRPK+V  SK SAGDG+YDIALADK+VMR+  SC F  G AS  E+A+ G SRDTPGAIYDP IGGSSA  P T FS A RFPV    F   GPG Y    GAG       G G  +WTG++TF DSEWS+ V   PPP LRPWQGFG+GCS+QEHIDYGACLDGRCC+RHS+E+KNAL VVQFL  +  RR P   S  P +      +   + H     P S SS    GG G         R A  KRTPLHFASERGEL+LVD RLC+QGDDRNAVDERG+ XXXXXXXXXXXX      QGD+EN     G  T  RGA P RPRQVPADPN QD+ GRTPLYLAC RGHERAVRALLKAGA PD++D RGKPAQEVAGAQ IYQLLQ+KADVSLVKANIAALE R+   ER R++  QA AL+ELAELK EELRL+ AV ALE KR AYA AA  +
Sbjct:   53 IIPLVKAETRPGARSSSSSNGVRLSYNNPRPKDVGSSKHSAGDGIYDIALADKVVMRTAPSCFFGGGMASGDESAVPGASRDTPGAIYDPNIGGSSAPAPTTLFSPASRFPVGQKVFDTLGPGQYYNPAGAGASACRPAGSGVVAWTGIDTFADSEWSKSV---PPPRLRPWQGFGNGCSVQEHIDYGACLDGRCCSRHSIEKKNALLVVQFLDGQRHRRSPQ--SPEPVHEDASPSSRSPATHNEDGTPLSFSSAGVGGGGGELAVGSGAARAAVRKRTPLHFASERGELSLVD-RLCFQGDDRNAVDERGFXXXXXXXXXXXXXXXXXXXQGDDENEVQPAGGETAPRGAAPTRPRQVPADPNVQDDKGRTPLYLACHRGHERAVRALLKAGACPDLVDIRGKPAQEVAGAQNIYQLLQFKADVSLVKANIAALEGRQRNEERQRKKVAQAAALKELAELKEEELRLKAAVSALENKREAYAAAANAR 536          
BLAST of mRNA_L-elsbetiae_contig1859.5429.1 vs. uniprot
Match: D7FMA6_ECTSI (Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA6_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 3.100e-149
Identity = 272/423 (64.30%), Postives = 303/423 (71.63%), Query Frame = 0
Query:  234 ASSSETAIKGISRDTPGAIYDPEIGGSSAIVPATRFSSADRFPVATTTFGNPGPGHYDAVDGAG-------GFGAASWTGVETFVDSEWSRQVEPVPPPSLRPWQGFGSGCSLQEHIDYGACLDGRCCTRHSVERKNALRVVQFLGERGKRREPNLLSSPPSYRHEESGAICS-SVHTGAFGP-SASSVDTSGGEGAGGTCYEDVRVAGGKRTPLHFASERGELALVDSRLCYQGDDRNAVDERGYTXXXXXXXXXXXXVVDRLLQGDEENAAPLVGEATRARGAPPERPRQVPADPNAQDNNGRTPLYLACLRGHERAVRALLKAGASPDVLDKRGKPAQEVAGAQRIYQLLQYKADVSLVKANIAALEEREHTAERHRREAEQARALRELAELKAEELRLREAVDALEAKRIAYARAAKVQ 647
            AS +E+A+ G SRDTPGAIYDP IGGSSA  P T FS A RFPV    F  PGPG Y    GAG       G G  +WTG++TF DSEWSR   PVPPP LRPWQGFG+GCS+QEHIDYGACLDGRCC+RHSVE+KNAL V QFL  + +RR P    SP   R + S +  S + H     P S +S D  GG G         R A  KRTPLHFASERGEL+LVD RLC+QGDDRNAVDERG+ XXXXXXXXXXXX    LLQGDE    P  GE    RGA P+RPRQ+PADPN QD+ GRTPLYLAC RGHERAVRALLKAGA PD++D RGKPAQEVAGAQ+IYQLLQ+KADVSLVKANIAALE R+   ER R++  QA AL+E     AEELRL+ AV ALE KR AYA AAK Q
Sbjct:    2 ASGAESAVPGASRDTPGAIYDPNIGGSSAPAPTTLFSPASRFPVGQKVFDTPGPGQYYNPAGAGASACRPAGPGVVAWTGIDTFADSEWSR---PVPPPRLRPWQGFGNGCSVQEHIDYGACLDGRCCSRHSVEKKNALLVAQFLDGQRQRRSPR---SPEPAREDASPSSNSPATHNEDGTPLSFASADVGGGGGEFAVGSGAARAAVRKRTPLHFASERGELSLVD-RLCFQGDDRNAVDERGFXXXXXXXXXXXXXXXXXLLQGDENEVQPAGGE-NAPRGAAPKRPRQLPADPNVQDDKGRTPLYLACHRGHERAVRALLKAGACPDLVDIRGKPAQEVAGAQKIYQLLQFKADVSLVKANIAALEGRQRNEERQRKKVAQAAALKEXXXXXAEELRLKAAVSALENKREAYAAAAKAQ 416          
BLAST of mRNA_L-elsbetiae_contig1859.5429.1 vs. uniprot
Match: A0A836CHI4_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHI4_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.510e-7
Identity = 87/367 (23.71%), Postives = 126/367 (34.33%), Query Frame = 0
Query:  265 PATRFSSADRFPVATTTF--GNPGPGHYDAVDGAGGFGAASWTGVETFVDSEWSRQVEPVPPPSLRPWQGFGSGCSLQEHIDYGACLDGRCCTRHSVERKNALRVVQFLGERGKRREP------------NLLSSPPSYRHEESGAICSSVHTGAFGPSASSVDTSGGEGAGGTCYEDVRVA------------------GGKRTPLHFASERGELALVDSRLCYQGDDRNAVDERGYTXXXXXXXXXXXXVVDRLLQGDEE-NAAPLVGEATRARGAPPERPRQVPADPNAQDNNGRTPLYLACLRGHERAVRALLKAGASPDVLDKRGKPAQEVAGAQR--IYQLLQYKADVSLVKANIAALEER 596
            P   F+  DRF   T      +PGPG Y     +GG        +   +  +  +  +   PP  + W  +G GCSL EH+ YGACLDG+C  RH+ ER N  R  +     G                 + LS+P    H  S          ++  + ++   SGG                                G  +T LH A   G+L  V +     G   +A D RG+T            +V RLL+     + AP    A RA           PA                          ALL+ GA     D  G+    V   +R  +Y  ++  AD +  +A + A+E R
Sbjct:  468 PCVVFNEVDRFRSTTAQDYEDDPGPGTYTVTAASGGTSVK----LRPHLLRQQQQNDDGNEPP--QEWGTYGYGCSLDEHVLYGACLDGKCLQRHAAERLNQARCRRHRAHAGAGSSSGASVGSASALVASALSAPGGLTHSNS----------SYTTAKNTSSVSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQHQTALHMAIYYGDLEQVHALCERHGASLHATDARGWTPLHAAARRGAAAIVRRLLRNAAHPHVAPSGYVAQRA----------APAXXXXXXXXXXXXXXXXXXXXXX-XXXALLECGADVTAADDAGRTPLRVTPMERMGLYAAVRTAADAAAARAQLRAVERR 807          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1859.5429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KH12_9PHAE2.070e-17963.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMA6_ECTSI3.100e-14964.30Ankyrin domain protein n=1 Tax=Ectocarpus siliculo... [more]
A0A836CHI4_9STRA1.510e-723.71Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 576..636
NoneNo IPR availablePFAMPF13857Ank_5coord: 516..562
e-value: 2.2E-7
score: 31.0
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 431..609
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 436..490
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 436..490
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 431..609
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 468..497
e-value: 1.8
score: 17.6
coord: 527..556
e-value: 3.6E-6
score: 36.5
coord: 434..464
e-value: 570.0
score: 6.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 527..559
score: 13.624
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 468..490
score: 10.099
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 434..467
score: 8.736
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 347..631
e-value: 4.1E-30
score: 106.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 436..575
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 435..491
e-value: 3.4E-7
score: 30.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 434..568
score: 21.774

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1859contigL-elsbetiae_contig1859:3789..8821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1859.5429.1mRNA_L-elsbetiae_contig1859.5429.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1859 3789..8821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1859.5429.1 ID=prot_L-elsbetiae_contig1859.5429.1|Name=mRNA_L-elsbetiae_contig1859.5429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=648bp
MAECGVQQDRVVSSALAHAAAIRRTLWVQEYKRKHGRALPPSADANTPPT
EGGGYRTHKAEEAPTVLDGPIYSTEYWRAWKSRSRRAGVREGGESNNSQH
VTDAADQRASVRRAFGTTRGRVLHSSTNVNPTSSFAGGRHGTLIFAAVSG
GSGGDSLLRAHHDAVIQPLTKRENRPAARASSSSIGIRLSHNDPRPKNVH
GSKRSAGDGMYDIALADKLVMRSTSSCSFRAGAASSSETAIKGISRDTPG
AIYDPEIGGSSAIVPATRFSSADRFPVATTTFGNPGPGHYDAVDGAGGFG
AASWTGVETFVDSEWSRQVEPVPPPSLRPWQGFGSGCSLQEHIDYGACLD
GRCCTRHSVERKNALRVVQFLGERGKRREPNLLSSPPSYRHEESGAICSS
VHTGAFGPSASSVDTSGGEGAGGTCYEDVRVAGGKRTPLHFASERGELAL
VDSRLCYQGDDRNAVDERGYTPLHDAAEQGNTRVVDRLLQGDEENAAPLV
GEATRARGAPPERPRQVPADPNAQDNNGRTPLYLACLRGHERAVRALLKA
GASPDVLDKRGKPAQEVAGAQRIYQLLQYKADVSLVKANIAALEEREHTA
ERHRREAEQARALRELAELKAEELRLREAVDALEAKRIAYARAAKVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom