prot_L-elsbetiae_contig1859.5428.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1859.5428.1
Unique Nameprot_L-elsbetiae_contig1859.5428.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length80
Homology
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BLAST of mRNA_L-elsbetiae_contig1859.5428.1 vs. uniprot
Match: A0A841I5G9_9DEIO (Uncharacterized protein n=2 Tax=Deinobacterium chartae TaxID=521158 RepID=A0A841I5G9_9DEIO)

HSP 1 Score: 46.6 bits (109), Expect = 5.570e-5
Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 0 
Query:   10 LLLVAVAITVLGAWRYSGGEPMS----LPGDIRYESGGLSVHFPWVSCIFLSVFGNILMRALHG 69
            L+L+   + ++GA  Y     +S    LPGDIRY+SG ++V FP VS + +S+  N+L R   G
Sbjct:    6 LMLIGALLLLVGALWYFFPGALSWFGRLPGDIRYQSGNVTVFFPIVSLLIVSLLLNLLFRIFGG 69
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1859.5428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A841I5G9_9DEIO5.570e-539.06Uncharacterized protein n=2 Tax=Deinobacterium cha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021320Protein of unknown function DUF2905PFAMPF11146DUF2905coord: 9..65
e-value: 2.1E-11
score: 43.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..47
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..79
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..67
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 9..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1859contigL-elsbetiae_contig1859:1964..2203 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1859.5428.1mRNA_L-elsbetiae_contig1859.5428.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1859 1964..2203 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1859.5428.1 ID=prot_L-elsbetiae_contig1859.5428.1|Name=mRNA_L-elsbetiae_contig1859.5428.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp
MLEPALRRPLLLVAVAITVLGAWRYSGGEPMSLPGDIRYESGGLSVHFPW
VSCIFLSVFGNILMRALHGGGARGRRTAW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021320DUF2905