prot_L-elsbetiae_contig1858.5425.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1858.5425.1
Unique Nameprot_L-elsbetiae_contig1858.5425.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1808
Homology
BLAST of mRNA_L-elsbetiae_contig1858.5425.1 vs. uniprot
Match: A0A6H5JUH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH9_9PHAE)

HSP 1 Score: 545 bits (1405), Expect = 5.260e-162
Identity = 613/1594 (38.46%), Postives = 755/1594 (47.37%), Query Frame = 0
Query:   55 KWHHKVTPSKRLKKHAQSGRLSERPVGETLNEAVDLVDASVAHQRRIRNLFSELETRQKTREEMDSDGEEEVHPVVQAAWQESRTQELRVSKKMTELTDDHECEDDILPVRTIQQIESYLLSSVAVLKSYMTTGVRVTATEILALMSQITFAAKTAEALSRWAGETLETLGSERNRAHALHRENAQVLREATMAQKGVLGLEAKLFHAGKEVESAKAYASRLKAESGDMRAVMSAIKDSVMVAGLPLVTHDENGELLGASQAAFSMIKELRETCVDQQDRIGR----------------------------------------------LEFFVEKGKLELEQAELTVKRMSQAATSKRARKRAAATAAAKAKHKGAYGTGSVXXXXXXXXXXXXXXXXSRSPTRSNLKAAAASLAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSPRGAQRYGAASSTT--------------VDLDRAAVSVSASTAVESYDGATPNRSREGGGR--GRTATNANNFPGGSGH-----GRERGRTQAT------------------------EAERAEGTSATGGRGP--GEEGGSVVTSPRATGLVAADTAGGGDKDHRPALQQERTSNRFDADNQQDLLQQRQHDQVSPAVRSGSGESIEEQQQGEGGGEDGREGDATERTSGSGKKLLDEESPAEAMASGAATK---IVQDPPLGA--DQNYGTPEQQXXXXXXXLESPPDGRKTERATGGEESVHGQDGERGGTMGSKEEHG----GSISGRDLASVA----PPLNAGARRVEEQGGLEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVEKASRHASAAVKGLEYSLKKTLGAVPGVGAAAKEQLSAALRSQ------------VASLKDTIRKDMQEVAEEISASVATESLGTTTELAKREARITQLGSRIEDLQTRLKTINDAHAAEMKSLNE-LASEGRKRXXXXXXXXXXXXXXXXXXYQFLPLATSXXXXXXXXXXXXXXXXXXXXXXXXXXESSVTSALNGEGEHDFGXXXXXXXXXEEVAEGGRRATEHQEFGEHHPRYAGYPHQLYQHRDGSLPRGDLQHQHQTQQVGNTPERRRGRG-EGGVLTTRFGDAVGGRPRSDGILGSIQSSPPPARTPVDGGDGKDAHWEASKGIGTLRRGKSAGTFFLQQQLEQHXXXXXGRGSGRHEGGGSADDIARTSGAAGERGSKARSTGGRDSPPKEIGRSSVSEPSGRAP-NGDSYVTEPRTS----------AEDQQTVSVLTAATSLVQTSATGTAPPPPSGKQQRYPGEXXXXXXXXXXQRQRTDHEESSRAGGGERSTPPRCVSGQS--ISAMNAVGVAAGRAAERHASPTVPTSACLLSPKGRDGGSAHEAGHNYRGTTKSAGDMTAATNLAT----APXXXXXXXXXXXTSMKEMQGRARIQHAPKSMSDVVVTAAGESTTETPQTTPRGGKAGITAAA-RGSSGKTANPGAQGGG--------EAADAAAIERAGTGDESDGDGGDKKHQRQQIALRAFLQGADE 1502
            +W HKVTPS+RLKKHAQ G L ERP+GETL +AV LVDASVAHQRRIRNLFSELE+R+KT E+ D++GE EV  VVQ AW ESRTQE+RVSKKM EL DD +C++ I PVR IQQ+E+YLLS VAVLKSYMTTG R+T TEIL+LMSQ+TFAA TAEALSRWAGE +ETLG ER+RAH+LHRENAQV REAT+AQK ++ LEAK+FH  KE+ESAKAYA+R+KAESGDMRAV  AI DSV  AGL L+THD +GE L A+QAAF MIK+LRETC+ QQD IGR                                              LEFFV++GKL+LEQAE+T+K M + ++SKRA                       XXXXXXXXXXXXXXX   SPT  N KA+AAS+AV                                                      ++        A SS                 D D  AVSVSA TAV+SY          G GR  GR ATN     GGS       GR R RTQA                         E  R   + ++  +GP     GGSV + P      A   +G   +   P L++E +      +N++   +    D    A ++     +EE++  E  GE       T+RTSG  ++   EESP    AS  ATK   +     + A  D+        XXXXXXX           +  GG       +GE G     +E  G    G ++G  L   A      L  G +  E+Q                                                P VE+A+R A  A++ LE ++K  LGA+PG+  AA+E LS ALR Q            V  LKDTI +D++EVAEE SA+  TES+   TELAKR+ARITQLGSRIEDLQTRL  INDAH A ++ LNE  A+E R                     Q  PL    XXXXXXXXXXX               +  T+      E D  XXXXX    +     GR  +  ++  E   RY      L+ ++ G +   D +H+H               G EGG+ T +FG    G     G++G +QS PPP RTPVD G GKDAHWE S GIG LRRGKSAGTF  QQQ  QH      RG G                               DSP ++  R     PSGR   +G  +  + R+S           EDQQTVSVLTA TS  Q+S  G    P  G+QQR P +          Q          R G  +R +P R  + Q+  I       V +G    RHASP  P S          GG+  E                      +                  S+K+MQGRARIQH PK++ DVV+  AG    E+P+    G  AG  A A RG  GK A  G    G        E A+      AG GDE+DG+  D+K QRQQ AL+AFL+G  E
Sbjct:   13 RWQHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIRNLFSELESREKTLEQTDNNGEGEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRAIQQLEAYLLSGVAVLKSYMTTGARITVTEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHSLHRENAQVSREATLAQKEIMSLEAKIFHTRKELESAKAYAARIKAESGDMRAVFGAIDDSVTAAGLELITHDASGEPLSATQAAFGMIKKLRETCISQQDHIGRWERGKERRNGGGSVLGLRWDWRPPSAAKETPFQFLTNPRTQTRTRRLEFFVKRGKLDLEQAEMTIKDMGRDSSSKRAXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXRPPSPTHGN-KASAASIAVSTAMFMASSHSAARVPSGDTYSGTRAGSPSSSSYNTPTNDDDAATVTSTDAGQSITTXXXTATAADSSRAGMQASMRTPRAGAGADRDGTAVSVSACTAVDSYSNNNATDRVGGRGRRGGRRATNTETAIGGSDGSVPNLGRRR-RTQAXXXXXXXXXXXXXXXXXXXXATSRGERHRGSVSPSSAAKGPLGYSRGGSVSSPPTGRSRRAGGESGEARQQSPPPLREEESGTGEGEENEKXXSEPPAWDDAG-ATKTPEEVKVEEEEGEEEVGE-------TQRTSGI-QQPTGEESPGNEHASAVATKEAGVALPAVVSAREDRTXXXXXXXXXXXXXXXXXXXXXXXXXKDRGG-------NGEEGEDEAPREGKGCDAAGGVAGASLIMTAVMSPEALGEGEQEQEDQRA------------------EHDSSSSPASDADIRGGSLGEGAAGMVAPTVERANRRALEAMRVLEDAMKNRLGALPGLDPAAREHLSTALREQARDGFRGGGSECVLLLKDTIGRDVREVAEEASATAETESMRMMTELAKRDARITQLGSRIEDLQTRLVNINDAHEAGLEGLNEEAAAEARSARPGRREESESSPTV-----QQPPLNAQQXXXXXXXXXXXQLFFDSELELEPRGIADDTTT-----ELDEXXXXXXYQHGD-----GREGSARRQGWE--GRYRPERDALHNNQHGGVTSRD-EHRHXXXXXXXXXXXXXDGGPEGGIPTAQFGGGNVG-----GVIGDVQS-PPPTRTPVDSGHGKDAHWEGSTGIGLLRRGKSAGTFLAQQQ--QHSVSSPERGGGXXXXXXXXXXXXXXX------------XXXXDSPTRKTTRGLFRYPSGRVTESGGGHFGDNRSSNNLPGLGGRVEEDQQTVSVLTADTSFTQSSNIGVTTRP-LGQQQRDPRKGGRGGGRGQPQ--------GHRRGVDDRESPQRQENEQTGGIGVKGGDCVVSGCEGGRHASP--PAS----------GGNVSEXXXXXXXXXXXXXXXXXXXXXXSPDHLGEYGGGGGSLAPAASVKDMQGRARIQHMPKTVGDVVLAGAGGGVDESPEMAVIGAVAGKPAVAERGPLGKEAKHGGDEKGADGVRKEPEGAEGGGTGEAGAGDETDGEE-DRKRQRQQRALQAFLKGVSE 1507          
BLAST of mRNA_L-elsbetiae_contig1858.5425.1 vs. uniprot
Match: D7G259_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G259_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 6.260e-130
Identity = 232/315 (73.65%), Postives = 273/315 (86.67%), Query Frame = 0
Query:   55 KWHHKVTPSKRLKKHAQSGRLSERPVGETLNEAVDLVDASVAHQRRIRNLFSELETRQKTREEMDSDGEEEVHPVVQAAWQESRTQELRVSKKMTELTDDHECEDDILPVRTIQQIESYLLSSVAVLKSYMTTGVRVTATEILALMSQITFAAKTAEALSRWAGETLETLGSERNRAHALHRENAQVLREATMAQKGVLGLEAKLFHAGKEVESAKAYASRLKAESGDMRAVMSAIKDSVMVAGLPLVTHDENGELLGASQAAFSMIKELRETCVDQQDRIGRLEFFVEKGKLELEQAELTVKRMSQAATSKRAR 369
            +WHHKVTPS+RLKKHAQ G L ERP+GETL +AV LVDASVAHQRRI+NLFSELE+R++T E+MD++GEEEV  VVQ AW ESRTQE+RVSKKM EL DD +C++ I PVR  QQ+E+YLLS VAVLKSYMTTG R+TATEIL+LMSQ+TFAA TAEALSRWAGE +ETLG ER+RAHALHRENAQV REAT+AQK ++ LEAK+FH  KE+ESAKAYA+R+KAESGDMR V  AI DSV  AGL L+THD +GE L A+QAAF MIK+LRETC+ QQD IGRLEFFVE+GKL+LEQAE+T+K M +A++SKRAR
Sbjct:   13 RWHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIKNLFSELESRERTLEQMDNNGEEEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRATQQLEAYLLSGVAVLKSYMTTGARITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQVSREATLAQKEIMSLEAKIFHTRKELESAKAYAARIKAESGDMRVVFGAIDDSVTAAGLELMTHDASGEPLSATQAAFGMIKKLRETCISQQDHIGRLEFFVERGKLDLEQAEMTIKDMGRASSSKRAR 327          
BLAST of mRNA_L-elsbetiae_contig1858.5425.1 vs. uniprot
Match: D7G258_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G258_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 3.410e-8
Identity = 54/114 (47.37%), Postives = 69/114 (60.53%), Query Frame = 0
Query: 1396 SMKEMQGRARIQHAPKSMSDVVVTAAGESTTETPQTTPRGGKAGITAAA-RGSSGKTAN-----PGAQG---GGEAADAAAIERAGTGDESDGDGGDKKHQRQQIALRAFLQGA 1500
            S+K++QGRARIQH PK++ DVV+  AG    E+P     G  AG  A A RG+SGK A       GA G     E A+      AG GDE+DG+  D+K +RQQ AL+AFL+GA
Sbjct:  122 SVKDVQGRARIQHMPKTVGDVVLAVAGGGVDESPDMAVTGAVAGNPAVAERGASGKEARHSGDKKGADGVRRESEGAEGGGTGEAGAGDETDGEE-DRKRKRQQRALQAFLKGA 234          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1858.5425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JUH9_9PHAE5.260e-16238.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G259_ECTSI6.260e-13073.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G258_ECTSI3.410e-847.37Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 342..362
NoneNo IPR availableCOILSCoilCoilcoord: 904..931
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1602..1624

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1858contigL-elsbetiae_contig1858:1109..14940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1858.5425.1mRNA_L-elsbetiae_contig1858.5425.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1858 438..14940 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1858.5425.1 ID=prot_L-elsbetiae_contig1858.5425.1|Name=mRNA_L-elsbetiae_contig1858.5425.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1808bp
MPSSQFETAAQVAINVRKGLAPTKKAGVLYGGTAAHSDTPKSLKTALAVQ
RLAVKWHHKVTPSKRLKKHAQSGRLSERPVGETLNEAVDLVDASVAHQRR
IRNLFSELETRQKTREEMDSDGEEEVHPVVQAAWQESRTQELRVSKKMTE
LTDDHECEDDILPVRTIQQIESYLLSSVAVLKSYMTTGVRVTATEILALM
SQITFAAKTAEALSRWAGETLETLGSERNRAHALHRENAQVLREATMAQK
GVLGLEAKLFHAGKEVESAKAYASRLKAESGDMRAVMSAIKDSVMVAGLP
LVTHDENGELLGASQAAFSMIKELRETCVDQQDRIGRLEFFVEKGKLELE
QAELTVKRMSQAATSKRARKRAAATAAAKAKHKGAYGTGSVGSGGSGGSG
GSSGKRGSRSPTRSNLKAAAASLAVAAAVSLSPSSSSTRGAANDAASHNT
AASTGTGNSGGSTATAPDSSRSGTRSGTRVSPRGAQRYGAASSTTVDLDR
AAVSVSASTAVESYDGATPNRSREGGGRGRTATNANNFPGGSGHGRERGR
TQATEAERAEGTSATGGRGPGEEGGSVVTSPRATGLVAADTAGGGDKDHR
PALQQERTSNRFDADNQQDLLQQRQHDQVSPAVRSGSGESIEEQQQGEGG
GEDGREGDATERTSGSGKKLLDEESPAEAMASGAATKIVQDPPLGADQNY
GTPEQQRQQQQQQLESPPDGRKTERATGGEESVHGQDGERGGTMGSKEEH
GGSISGRDLASVAPPLNAGARRVEEQGGLEVEEEEEEEEEEEEGDDDGDD
DDNDDVIDGGGGTLGGGGEAAAAAPAVEKASRHASAAVKGLEYSLKKTLG
AVPGVGAAAKEQLSAALRSQVASLKDTIRKDMQEVAEEISASVATESLGT
TTELAKREARITQLGSRIEDLQTRLKTINDAHAAEMKSLNELASEGRKRR
QEQGEESSTTSSGGESTYQFLPLATSPRQEQQQRQHHAFTFGGGGRRDSS
IAESSVTSALNGEGEHDFGGGGGGGGGVEEVAEGGRRATEHQEFGEHHPR
YAGYPHQLYQHRDGSLPRGDLQHQHQTQQVGNTPERRRGRGEGGVLTTRF
GDAVGGRPRSDGILGSIQSSPPPARTPVDGGDGKDAHWEASKGIGTLRRG
KSAGTFFLQQQLEQHQHQHPGRGSGRHEGGGSADDIARTSGAAGERGSKA
RSTGGRDSPPKEIGRSSVSEPSGRAPNGDSYVTEPRTSAEDQQTVSVLTA
ATSLVQTSATGTAPPPPSGKQQRYPGEPGGNGGEGRHQRQRTDHEESSRA
GGGERSTPPRCVSGQSISAMNAVGVAAGRAAERHASPTVPTSACLLSPKG
RDGGSAHEAGHNYRGTTKSAGDMTAATNLATAPAPAPRSAPAPATSMKEM
QGRARIQHAPKSMSDVVVTAAGESTTETPQTTPRGGKAGITAAARGSSGK
TANPGAQGGGEAADAAAIERAGTGDESDGDGGDKKHQRQQIALRAFLQGA
DETQANLAFVALRQEPFLVQEFDYLANQIRDLHEATSGAIPRHLSHGELR
DRLRELSSRSVPLLRRVRARYRRLHARWASKLLAALSTRGLSAGDADVSL
TCSLCGYDWRRAQPRENHRRPAFHGMKRGNTPGRVGGTRRRNYYQPQRRN
EAESTNAGGSLSKRDIVQQQRRLGPAVGGAGAVVVPGVVEGWKDTGSGRS
FLQVGGGSGVGSGGNNTSGPVSRAGPSLLSDETLFLHSLSAPRFSGAGIC
DGAGTFSVRGASGGGDGVSSMGSRSALSKTEREAASGRRVESTPREAQVA
LPPLAFQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type