prot_L-elsbetiae_contig1857.5422.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1857.5422.1
Unique Nameprot_L-elsbetiae_contig1857.5422.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length499
Homology
BLAST of mRNA_L-elsbetiae_contig1857.5422.1 vs. uniprot
Match: A0A6H5JLQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ8_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 5.710e-84
Identity = 251/601 (41.76%), Postives = 291/601 (48.42%), Query Frame = 0
Query:   17 RDRAVSEMHMSIDCQSFVNVGQLMGSRHGTAGGS---------NSNSNADDLG--SCLSDD---------FDQIFHPGGGSASSAWS-GRALYGR-----GSATD-----GDXXXXXXESLLPALPSRCTTPG---------------------------LDADDVEDS---------------------STATEGVSSRTPPRLRDSWLHVPTRGDGGTAA-----AGEAQQQPDRVDTEVVDGPEDAA-----------------GIDPQQQQRLCDAAXXXXXXRR----------------------------AAAVALADCGECLARAVDKAAAVAASQLQQLVRVVNEQAEAGADACARGKQVVVKAVDNVPQAPVRVWLGRIAGSLVIGAVLGGAAAYYALPRAMT--GCASAAGDAGSASSASPRWDTG-RGASFGAGEPGEGAEQGFGDRLNKALFAARAGEAAAQQVLLEEVRNILAATGKSGGISAEQILRQFNARRFNEASKAWSAAEGSVAGSDPLDSLFFAPGSTPTTPXXXXXXXXXXXSQQQHXXXXXXXXXXXXXXXXXXPFIPDGAAPATECAGGASGSSFCS 485
            R     +M MS+D QSFVN+GQLMGSRHG               + +  +D    S LSDD         FDQIFHP   S S A S GR LYG+     G A D     G       +S+LPALPSR +TPG                             A  VED                        AT G      P+  D   H  T    G  +      G   QQ     T    G E AA                 G D + +       XXXXXX                              AAA AL DCG+CL R V +A A+A ++  ++ R V    +AGADAC+RG++  VKAVD+VPQAPVRVWLGR+A S+V+G VLG AA + AL  A T  G   A  DA      SP W TG  G S GAG    GA+Q FGDRL+KALFAARAGEAAAQQ LLE++RNILAATG+SGGISAEQILRQFNA+RF EASKAWSAAEG+VAGSDPLD LFFAP + P  P           SQQ                      IP GA PAT+CAGGASGS+FCS
Sbjct:   23 RGNGFRDMEMSVDSQSFVNLGQLMGSRHGXXXXXXXXXXXXXXTTRTGLEDFACTSFLSDDDDDSEGLRDFDQIFHPAATSTSGARSSGRELYGQQRHRGGGAADHQHGDGGVLDDDNDSVLPALPSRSSTPGSPRGYSTSNSGNSSSSKPYFIAPAASAAGAGWVEDDFGSGASARRGGGRVGHASCDHRLATGGAPENNLPQNTDITTHTKTTPAAGITSPEIQPGGSVAQQSGTSQTAATAGGETAASGSSTPFLRESWLHVPVGDDDEIKSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQALGDCGDCLVRGVGRAGALAKARALEVGRAVKVHVDAGADACSRGQKAAVKAVDSVPQAPVRVWLGRVALSIVVGIVLGSAATFCALRAATTKMGSVCAGADA-----TSPWWSTGGAGDSVGAG----GADQSFGDRLDKALFAARAGEAAAQQGLLEDMRNILAATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAPPTAPVNPSASA-------SQQPQPSSSS---------------IPHGATPATDCAGGASGSTFCS 592          
BLAST of mRNA_L-elsbetiae_contig1857.5422.1 vs. uniprot
Match: D7G052_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G052_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 6.740e-48
Identity = 119/204 (58.33%), Postives = 132/204 (64.71%), Query Frame = 0
Query:  285 VLGGAAAYYALPRAMT--GCASAAGDAGSASSASPRWDTG-RGASFGAGEPGEGAEQGFGDRLNKALFAARAGEAAAQQVLLEEVRNILAATGKSGGISAEQILRQFNARRFNEASKAWSAAEGSVAGSDPLDSLFFAPGSTPTTPXXXXXXXXXXXSQQQHXXXXXXXXXXXXXXXXXXPFIPDGAAPATECAGGASGSSFCS 485
            +LG AA + AL  A T  G   A  DA      SP W TG  G S GAG    GA+Q FGDRL+KALFAARAGEAAAQQ LLE++RNILAATG+SGGISAEQILRQFNA+RF EASKAWSAAEG+VAGSDPLD LFFAP + P  P           SQQ                      +P GA PAT+CAGGASGS+FCS
Sbjct:    1 MLGSAATFCALRAATTKTGSVCAGADA-----TSPWWSTGGAGDSVGAG----GADQSFGDRLDKALFAARAGEAAAQQGLLEDMRNILAATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAPPTAPVNPSASS-------SQQPQPSSSS---------------VPHGATPATDCAGGASGSAFCS 173          
BLAST of mRNA_L-elsbetiae_contig1857.5422.1 vs. uniprot
Match: D7G053_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G053_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 8.080e-17
Identity = 122/385 (31.69%), Postives = 148/385 (38.44%), Query Frame = 0
Query:   17 RDRAVSEMHMSIDCQSFVNVGQLMGSRHGTAGGSNS---------NSNADDLG--SCLSDD---------FDQIFHPGGGSASSAWS-GRALYGR-----GSATD-----GDXXXXXXESLLPALPSRCTTPG-----LDADDVEDSST-------------------------------------------ATEGVSSRTPPRLRDSWLHVPTRGDGGTAA--------AGEAQQQPDRVDTEVVDGPEDAAGIDPQ---------------QQQRLCDAAXXXXXXRR-------------------------------AAAVALADCGECLARAVDKAAAVAASQLQQLVRVVNEQAEAGADACARGKQVVVKAVDNVPQAP 268
            R     +M MS+D QSFVN+GQLMGSRHG                 +  DDL   S LSDD         FDQIFHP   S S AWS GR LYG+     G A D     G       +S+LPALPSR +TPG     L ++    SS+                                           AT G       +  D+  H         AA         G   QQ     T    G E AA                    + +   +AAXXXXXX                                 AAA AL DCG+CL R V +A A+A ++  +  R V  Q EAGADAC+RG++  VKAVD+VPQAP
Sbjct:   60 RGNGFRDMEMSVDSQSFVNLGQLMGSRHGXXXXXXXXXXXXXXXXRTGLDDLACTSFLSDDDDDSEGLRDFDQIFHPAATSTSGAWSSGRELYGQQRHRGGGAVDHQHGDGGAFDDDNDSVLPALPSRSSTPGSPRGYLTSNSGNSSSSKPYFVASAASAAGAGWVEEDFGSGAGARRGGGRVGHASCDHRLATGGALENNLTQNTDTTTHTKATAPAAAAAITSPEIQPGGSLTQQSGTSRTAAAAGGEIAAASGSSTPFLRESWLHVPIGDEDEIKSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQALGDCGDCLVRGVGRAGALAKARALEFGRAVKVQVEAGADACSRGQKAAVKAVDSVPQAP 444          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1857.5422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLQ8_9PHAE5.710e-8441.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G052_ECTSI6.740e-4858.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G053_ECTSI8.080e-1731.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 296..499
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1857contigL-elsbetiae_contig1857:7573..10429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1857.5422.1mRNA_L-elsbetiae_contig1857.5422.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1857 7573..10597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1857.5422.1 ID=prot_L-elsbetiae_contig1857.5422.1|Name=mRNA_L-elsbetiae_contig1857.5422.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=499bp
MEAGSSNSGGSNSDRERDRAVSEMHMSIDCQSFVNVGQLMGSRHGTAGGS
NSNSNADDLGSCLSDDFDQIFHPGGGSASSAWSGRALYGRGSATDGDDDD
DDDESLLPALPSRCTTPGLDADDVEDSSTATEGVSSRTPPRLRDSWLHVP
TRGDGGTAAAGEAQQQPDRVDTEVVDGPEDAAGIDPQQQQRLCDAAAAAA
RARRAAAVALADCGECLARAVDKAAAVAASQLQQLVRVVNEQAEAGADAC
ARGKQVVVKAVDNVPQAPVRVWLGRIAGSLVIGAVLGGAAAYYALPRAMT
GCASAAGDAGSASSASPRWDTGRGASFGAGEPGEGAEQGFGDRLNKALFA
ARAGEAAAQQVLLEEVRNILAATGKSGGISAEQILRQFNARRFNEASKAW
SAAEGSVAGSDPLDSLFFAPGSTPTTPPADPSTPPPDSSQQQHQQQHQHQ
HQHQQHQPQQQPFIPDGAAPATECAGGASGSSFCSTAAPAARPRVQQYR
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