prot_L-elsbetiae_contig1857.5421.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1857.5421.1
Unique Nameprot_L-elsbetiae_contig1857.5421.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length474
Homology
BLAST of mRNA_L-elsbetiae_contig1857.5421.1 vs. uniprot
Match: D7G051_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G051_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 9.140e-100
Identity = 207/394 (52.54%), Postives = 247/394 (62.69%), Query Frame = 0
Query:    1 MSRAAGRRRLRAWLRRRRRRVDALRAADDHRALSGLSPSAVRWRRQRRRDERLRMEAALRSWRTGARQRXXXXXXXXXXXXXXXXXXXXXXVEAWEGWATRRRRWRGLLADARAVRARRLGGEGLRGLRDGTLGTRARREALRIADELWRRRGATVFAA-LRNLVKSRRRLLRRASALRLRVAARAGLRRWRRIVQNTRVARDGRIKGESWRRRKAMRAGVCALSDGSGRRVAQDRAMCAGRLHFSRALASRAAASWRVWTRRQAAAAELYDAATALHRSRIASAGLRALDRVARARTTRREAAHTADRHRLRTRGLGRWRAAAALRAHERGQAITATVHWATTLSSKVLVSWAAAXXXXXXXXXXXXXXXXXXXXXXXXXGLRAWAAVVFGHP 393
            +SRA   R LRAW+ RRRRR++A RAA+DHRA + +SP A RWRRQRRRD++LRMEAA  SWR   R R                      + AW G+A  R R RGLLA+A   RARRL G+GLRGL+ G L  RA R+A+ + DE WRRRGA +  A LRNL +SRRR++RRA+AL LRVAARAGL RWR+  +++RVAR+  +KGE+WRR KA R GV  LS   G R  Q                  A A+WR WTRR+AAAA+LY+ A+ALHRS + SAG+RALDRVARART+RREA   A+RH LR  GLGRWRAAAA R   R +A  ATVHWA TLSSKVL+SW AA                          LRAW A V   P
Sbjct:   19 LSRAVAGRWLRAWVERRRRRLEATRAAEDHRARAAVSPGAARWRRQRRRDQQLRMEAAWSSWRATTRGRRTSRSARRAVVEAVESRLRSGAIGAWRGFADGRLRRRGLLAEAAQSRARRLKGKGLRGLKGGALDARAPRDAVWVGDEHWRRRGAAIVVARLRNLTESRRRMVRRAAALCLRVAARAGLTRWRQSARDSRVAREACVKGEAWRREKARRDGVSMLSGRLGGRAEQKXXXXXXXXXXXXXXXXXAVAAWRGWTRRRAAAADLYEGASALHRSWVLSAGMRALDRVARARTSRREAIVVAERHLLRFYGLGRWRAAAASRRRARSRAEIATVHWARTLSSKVLISWEAAALQQWAETRQEEAAARHERLAGKRRALRAWMARVRSRP 412          
BLAST of mRNA_L-elsbetiae_contig1857.5421.1 vs. uniprot
Match: A0A6H5JMA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA0_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 7.670e-95
Identity = 208/356 (58.43%), Postives = 245/356 (68.82%), Query Frame = 0
Query:    1 MSRAAGRRRLRAWLRRRRRRVDALRAADDHRALSGLSPSAVRWRRQRRRDERLRMEAALRSWRTGARQRXXXXXXXXXXXXXXXXXXXXXXVEAWEGWATRRRRWRGLLADARAVRARRLGGEGLRGLRDGTLGTRARREALRIADELWRRR-GATVFAALRNLVKSRRRLLRRASALRLRVAARAGLRRWRRIVQNTRVARDGRIKGESWRRRKAMRAGVCALSDGSGRRVAQDRAMCAGRLHFSRALASRAAASWRVWTRRQAAAAELYDAATALHRSRIASAGLRALDRVARARTTRREAAHTADRHRLRTRGLGRWRAAAALRAHERGQAITATVHWATTLSSKVLVSWAAA 355
            MSRA   RRLRAW+ RRRRR++A RAA+DHRA + ++P A RWRRQRRRD++LRMEAA  SWR   R R                      + AW  +   R   RGLLA+A   RARRL  +GLRG++ G L  RA R+A+ + DE WRRR  A V A LRNL +SRRR++RRA+AL LRVAARAGL RWR+  ++ RVAR+  +KGE+WRR KA R GV  LS   GRR   DRA+    LH SR LA RA A WR WTRR+AAAA+LY+ A+ALHRS I SAGLRALDRVARART+RREA   A+RH LR  GLGRWRAAAA R   R +A  ATVHWA TLSSKVL+SW AA
Sbjct: 2283 MSRAVAGRRLRAWVERRRRRLEATRAAEDHRARAAVNPGAARWRRQRRRDQQLRMEAAWSSWRETTRGRKMSRSARRAVVEAVESRLRSSAIGAWRDFVDGRLARRGLLAEAAQSRARRLKRKGLRGVKGGALDARAPRDAVWVGDEHWRRRRAAIVVARLRNLAESRRRMVRRAAALCLRVAARAGLTRWRQSARDWRVAREACVKGEAWRRDKARRDGVSVLSGRLGRRAKHDRAIRVSTLHLSRRLAGRAVAVWRGWTRRRAAAADLYEGASALHRSWILSAGLRALDRVARARTSRREAIVVAERHLLRFYGLGRWRAAAASRRRARSRAEIATVHWARTLSSKVLISWEAA 2638          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1857.5421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G051_ECTSI9.140e-10052.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMA0_9PHAE7.670e-9558.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1857contigL-elsbetiae_contig1857:1089..4763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1857.5421.1mRNA_L-elsbetiae_contig1857.5421.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1857 227..5352 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1857.5421.1 ID=prot_L-elsbetiae_contig1857.5421.1|Name=mRNA_L-elsbetiae_contig1857.5421.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=474bp
MSRAAGRRRLRAWLRRRRRRVDALRAADDHRALSGLSPSAVRWRRQRRRD
ERLRMEAALRSWRTGARQRAASRSARRAAVAGAESRLRRRAVEAWEGWAT
RRRRWRGLLADARAVRARRLGGEGLRGLRDGTLGTRARREALRIADELWR
RRGATVFAALRNLVKSRRRLLRRASALRLRVAARAGLRRWRRIVQNTRVA
RDGRIKGESWRRRKAMRAGVCALSDGSGRRVAQDRAMCAGRLHFSRALAS
RAAASWRVWTRRQAAAAELYDAATALHRSRIASAGLRALDRVARARTTRR
EAAHTADRHRLRTRGLGRWRAAAALRAHERGQAITATVHWATTLSSKVLV
SWAAAAIQQWAESRQEEAATQHERAARKRRGLRAWAAVVFGHPWNRKLEG
DPRLLSSAHRHEPYPPDKTARFSSRETAAAAAYCQSKSQPLPCLPRLKTD
GGTNPEAQHHRCRDFVRANPLPY*
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