prot_L-elsbetiae_contig1856.5408.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1856.5408.1
Unique Nameprot_L-elsbetiae_contig1856.5408.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length70
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1856.5408.1 vs. uniprot
Match: B5LWB0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWB0_9PHYC)

HSP 1 Score: 89.4 bits (220), Expect = 4.900e-22
Identity = 42/63 (66.67%), Postives = 53/63 (84.13%), Query Frame = 0 
Query:    6 GASGVSLLSGSGVVVGDSIVLVSGGRSWRIRLPSTKESAENVLVIEYRSGVVWRQAAIYIVPP 68
            G +GVSLLSGSG+VVG+SI L SGGRSWR+RLPS+ ES +N+LV EY+SG  W QAA++ +PP
Sbjct:    7 GNTGVSLLSGSGIVVGESITLFSGGRSWRLRLPSSSESEDNILVFEYKSGARWVQAAVFAIPP 69
[Close]
BLAST of mRNA_L-elsbetiae_contig1856.5408.1 vs. uniprot
Match: Q6XM23_9PHYC (FirrV-1-B13 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM23_9PHYC)

HSP 1 Score: 81.3 bits (199), Expect = 7.390e-19
Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 0 
Query:    1 MDGGS-GASGVSLLSGSGVVVGDSIVLVSGGRSWRIRLPSTKESAENVLVIEYRSGVVWRQAAIYIVP 67
            MDG S G +GVSLLSGSG++V  SI L SGGRSWR RLPS+ ES  N+LV+EY+ G  W QAA+Y VP
Sbjct:    1 MDGTSTGTAGVSLLSGSGLLVESSITLYSGGRSWRFRLPSSSESENNILVVEYKLGAQWVQAAVYRVP 68
[Close]
BLAST of mRNA_L-elsbetiae_contig1856.5408.1 vs. uniprot
Match: Q6XLU2_9PHYC (FirrV-1-I4 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLU2_9PHYC)

HSP 1 Score: 76.3 bits (186), Expect = 7.080e-17
Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 0 
Query:    6 GASGVSLLSGSGVVVGDSIVLVSGGRSWRIRLPSTKESAENVLVIEYRSGVVWRQAAIYIV 66
            G +GVSLLSGS ++V  SI L SGGRSWR RLPS+ ES +N+LV+EY+SG  W QA +Y V
Sbjct:    7 GTAGVSLLSGSRLLVESSITLFSGGRSWRFRLPSSSESEKNILVVEYKSGARWVQAGVYAV 67
[Close]
BLAST of mRNA_L-elsbetiae_contig1856.5408.1 vs. uniprot
Match: Q8QNI2_ESV1K (EsV-1-95 n=2 Tax=root TaxID=1 RepID=Q8QNI2_ESV1K)

HSP 1 Score: 61.6 bits (148), Expect = 4.440e-11
Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 0 
Query:    1 MDGGSGAS-GVSLLSGSGVVVGDSIVLVSGGRSWRIRLPSTKESAENVLVIEYRSGVVWRQAAIYIV 66
            M+GGS    GV+L +G     GDS+ LVSGGR WR+R+PS +ES++N+L++E + G+ W  A  ++V
Sbjct:    1 MEGGSSNGFGVTLENGMSTTGGDSMTLVSGGRIWRLRVPSIQESSDNILILEVKHGITWYPAQQFVV 67
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1856.5408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
B5LWB0_9PHYC4.900e-2266.67Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XM23_9PHYC7.390e-1964.71FirrV-1-B13 n=1 Tax=Feldmannia irregularis virus a... [more]
Q6XLU2_9PHYC7.080e-1762.30FirrV-1-I4 n=1 Tax=Feldmannia irregularis virus a ... [more]
Q8QNI2_ESV1K4.440e-1146.27EsV-1-95 n=2 Tax=root TaxID=1 RepID=Q8QNI2_ESV1K[more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1856contigL-elsbetiae_contig1856:11416..11625 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1856.5408.1mRNA_L-elsbetiae_contig1856.5408.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1856 11416..11625 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1856.5408.1 ID=prot_L-elsbetiae_contig1856.5408.1|Name=mRNA_L-elsbetiae_contig1856.5408.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=70bp
MDGGSGASGVSLLSGSGVVVGDSIVLVSGGRSWRIRLPSTKESAENVLVI
EYRSGVVWRQAAIYIVPPA*
back to top