prot_L-elsbetiae_contig1847.5367.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1847.5367.1
Unique Nameprot_L-elsbetiae_contig1847.5367.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length562
Homology
BLAST of mRNA_L-elsbetiae_contig1847.5367.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 399 bits (1024), Expect = 8.070e-127
Identity = 271/443 (61.17%), Postives = 296/443 (66.82%), Query Frame = 0
Query:   88 FPDLFGACRPGHNNGRRRGRXXXXXXXXXXTTRKEPPRPSSLDRTRNRSRDGGGRRRDRMSAGRRSLSPETPHTAAHRWIQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAGVETGKREARREWEXXXXXXXXXXGETGMRTAMAXXXXXXXXXXXXXXXXXXXXXXX-----ASRRWKPIDKLSRALGSTRRRASRQAGGVGRDGAEGEAGNEQRLNFFTEADLDELLHSTFFIKMCDDASWLYVEDHPYVPELNWLLTLWGGYKIAPRFQGEVKQNEAHRMLFQCESGRHRGNIRIRSRATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRRINGYVSWNGSRFTHVPAREGATVFMLQKMASS 525
            FPDLFGACRP H+   RR            +   E  RPSS+ R R              S  RR LS E P TAA RW+ E                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            A   VE GK +   +            G  G +T++AXXXXXXXXXX          XXX     ++ RW+ IDKLSRALGSTRRR SRQ G    +G EG   +EQ++NFFTE DLDELLHSTFFIKMCDDASWLYVEDHP+ PELNWLL+LWGGYKIAPRFQGEVKQNEAHRMLFQ E+GRHR ++RIRSRATNTFLFFLG+KQPLTWVAWDRDVVGG+WEDLKLEWVGKPQGPDGVLVGDERGRVVIRSR + GYVSWNGSRFTHVP REGATVFMLQ+MA S
Sbjct:  310 FPDLFGACRPSHHERHRRRERSLSSPPSSPSATLESTRPSSVGRNR-----XXXXXXXXPSPRRRRLSLEVPRTAADRWVDEGGNYGAGKEQRRAAGADGAARQSGCASDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPQVGASAAAGAAGEVEAGKGDVEEK---------EGGGRNGAKTSVAXXXXXXXXXXTGLSGSWRDGXXXXXXXXSNSRWRSIDKLSRALGSTRRRTSRQGGAARGEGGEG---SEQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRDHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPS 735          
BLAST of mRNA_L-elsbetiae_contig1847.5367.1 vs. uniprot
Match: D8LSC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC8_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 3.550e-74
Identity = 120/146 (82.19%), Postives = 132/146 (90.41%), Query Frame = 0
Query:  305 ASRRWKPIDKLSRALGSTRRRASRQAGGVGRDGAEGEAGNEQRLNFFTEADLDELLHSTFFIKMCDDASWLYVEDHPYVPELNWLLTLWGGYKIAPRFQGEVKQNEAHRMLFQCESGRHRGNIRIRSRATNTFLFFLGVKQPLTWV 450
            +SRRW+ IDKLSRALGSTRRR SRQ G    +G EG   +EQ++NFFTE DLDELLHSTFFIKMCDDASWLYVEDHP+ PELNWLL+LWGGYKIAPRFQGEVKQNEAHRMLFQ E+GRHRG++RIRSRATNTFLFFLG+KQPLTWV
Sbjct:  317 SSRRWRSIDKLSRALGSTRRRTSRQGGAARGEGGEG---SEQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV 459          
BLAST of mRNA_L-elsbetiae_contig1847.5367.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA)

HSP 1 Score: 173 bits (438), Expect = 6.530e-44
Identity = 92/205 (44.88%), Postives = 127/205 (61.95%), Query Frame = 0
Query:  321 STRRRASRQAGGVGRDGAEGEAGNEQRLNFFTEADLDELLHSTFFIKMCDDASWLYVEDHPYVPE----LNWLLTLWG-GYKIAPRFQGEVKQNEAHRMLFQCESGRHRGNIRIRSRATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRRINGYVSWNGSRFTHVPAREGATVFMLQ 520
            +T RR  R+ GG+ R  +EG  G + +   FT A   EL+ S FF+++ DD SW+YVE   Y P+    L W + L+  GYK+  R+ G+V  ++A+RMLFQCE GR  G++ +RSR TNT LF LG+++P T VAWDR+V GGDWED+++EW             +  G VVI  +R  GY+ W G RF HV  R+ A+ FMLQ
Sbjct:  319 ATARRRRRRHGGIERGRSEG--GLDLQPYLFTRATAHELMDSLFFMRVVDDDSWVYVEHDLYQPQEGAGLGWAMNLFHRGYKVGVRYAGDVDPHDANRMLFQCEPGRASGHVWLRSRGTNTLLFMLGLRKPRTLVAWDREVPGGDWEDMRIEWC-----------PEHNGHVVISCKRAGGYLQWTGDRFGHVDERDCASRFMLQ 510          
BLAST of mRNA_L-elsbetiae_contig1847.5367.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA)

HSP 1 Score: 166 bits (420), Expect = 7.470e-41
Identity = 78/182 (42.86%), Postives = 119/182 (65.38%), Query Frame = 0
Query:  347 RLNFFTEADLDELLHSTFFIKMCDD-ASWLYVEDHPYVPE----LNWLLTLWG-GYKIAPRFQGEVKQNEAHRMLFQCESGRHRGNIRIRSRATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRRINGYVSWNGSRFTHVPAREGATVFMLQKM 522
            R   FT     ELL S FFIK+ D+  +W++VED  +       L W ++L+  GY++  R+ G+V  ++AHR++FQCE GR  G++RIRSR +NT+LF LG+++PLT VAWDR+V GGDWED+++ W+ +          ++ GRV+IR +   GY+ W G++F H P ++ A+ FMLQ +
Sbjct:  428 RPRHFTAETAHELLDSMFFIKLVDEEGAWMFVEDDLHESREGGGLGWAMSLFHRGYRVGARYAGDVGPHDAHRLVFQCEPGRAAGHVRIRSRGSNTYLFMLGLRRPLTLVAWDREVAGGDWEDMRIVWLPR---------AEDEGRVLIRCKTAGGYLQWTGTKFVHTPVKDSASRFMLQSL 600          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1847.5367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L805_9PHAE8.070e-12761.17Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LSC8_ECTSI3.550e-7482.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZHV2_9STRA6.530e-4444.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVS8_9STRA7.470e-4142.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 253..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1847contigL-elsbetiae_contig1847:5134..10563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1847.5367.1mRNA_L-elsbetiae_contig1847.5367.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1847 1255..10659 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1847.5367.1 ID=prot_L-elsbetiae_contig1847.5367.1|Name=mRNA_L-elsbetiae_contig1847.5367.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=562bp
MVAAAAAPADGESGSSRSTKRRDGGGALGRTASSQRLGEKGEGRGLRGSS
SSSEHGLGGGIGGRDAEGGDDGDSDGDHQERGHHHLAFPDLFGACRPGHN
NGRRRGRGPSSPPSSPPTTRKEPPRPSSLDRTRNRSRDGGGRRRDRMSAG
RRSLSPETPHTAAHRWIQEEGGGGGGGGGGRERRASGGGGAERRGGWTSD
DGGAGGHGAGSRGSRRRMRGLTSSSFSSLPPPPAAAAAAAAAAAAKAGVE
TGKREARREWEETEEEAEEAEGETGMRTAMAAAVVSAAAAAGIGGGGGGD
GGGGASRRWKPIDKLSRALGSTRRRASRQAGGVGRDGAEGEAGNEQRLNF
FTEADLDELLHSTFFIKMCDDASWLYVEDHPYVPELNWLLTLWGGYKIAP
RFQGEVKQNEAHRMLFQCESGRHRGNIRIRSRATNTFLFFLGVKQPLTWV
AWDRDVVGGDWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRRINGYVSW
NGSRFTHVPAREGATVFMLQKMASSSSSSGGGGGGRGTSTSKSPSSSSMA
SRRIRQRRGDQ*
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