prot_L-elsbetiae_contig1846.5365.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1846.5365.1
Unique Nameprot_L-elsbetiae_contig1846.5365.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length350
Homology
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 2.360e-64
Identity = 154/225 (68.44%), Postives = 169/225 (75.11%), Query Frame = 0
Query:  125 GFDPHDDSDNLRIHNNIVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDYSGNHCTDNKYGIRWSVGASHNKIYDNEIYNXXXXGIYMYLGSDPAGVPENTTYYTGGLPSFNIIANNLVDTATEGIKIGDTVGNEFTGNVFRNTDTLRFRDSPQTIWKDNVIPAGLKIDPEGACFVAGSDMDQLGPEAILC 349
            GFDPHDDSDNLRIHNNIV+                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       GDYS N CTDNKYG RWSVGASHNKIYDNE+Y+    GIYMY GSD         Y + GLPS+NIIANN++DTATEGIK+GDTVGNEFTGNV  NT  LRFR+S + IWKDN IPAG+ ID EG+CF + SD+ QLG EAI+C
Sbjct:  282 GFDPHDDSDNLRIHNNIVWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFESMEGDYSNNKCTDNKYGFRWSVGASHNKIYDNEVYDSQQYGIYMYEGSD-------LPYVSDGLPSYNIIANNIIDTATEGIKMGDTVGNEFTGNVITNTADLRFRNSSEVIWKDNDIPAGVDIDSEGSCFTSDSDIVQLGEEAIVC 499          
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Match: D7G1G2_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G2_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 3.100e-37
Identity = 112/221 (50.68%), Postives = 141/221 (63.80%), Query Frame = 0
Query:  122 QRAGFDPHDDSDNLRIHNNIVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDYSGNHCTDNKYGIRWSVGASHNKIYDNEIYNXXXXGIYMYLGSDPAGVPENTTYYTGGLPSFNIIANNLVDTATEGIKIGDTVGNEFTGNVFRNTDTLRFRDSPQTIWKDNVIPAGLKIDPEGACFVAGSDMDQL 342
            Q+ GFDPHDDSDNLRIHNNIVY NGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                + S N CT N+ GIR S+G+S+NKI+DN++ +     I+MYLGSD        +  T G+ + N+  NN ++ +  G+ + +T      GN F +TD   ++DS   +W+DN I     +     C  + SD DQ+
Sbjct:  136 QQYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFDIEISDNLCTQNEEGIRLSMGSSYNKIFDNQVIDTAGRSIWMYLGSDEV----EASAATDGMCTGNLFQNNYLEGSETGVAMTETRDTMLIGNTFIDTDNNEWKDSDGLVWRDNNIDGDFDMRFSDTCVTSESDFDQI 352          
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Match: D8LKL1_ECTSI (Mannuronan C-5 epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL1_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 5.710e-35
Identity = 67/107 (62.62%), Postives = 80/107 (74.77%), Query Frame = 0
Query:  243 GIYMYLGSDPAGVPENTTYYTGGLPSFNIIANNLVDTATEGIKIGDTVGNEFTGNVFRNTDTLRFRDSPQTIWKDNVIPAGLKIDPEGACFVAGSDMDQLGPEAILC 349
            GIYMY GSD         Y + GLPS+N+IANN++DTATEGIK+G+TVGNEF GNV  NT  LRFR+S   IWKDN IP G+ IDPEG+CF + SD+ QLG EAI+C
Sbjct:  291 GIYMYEGSD-------LPYVSDGLPSYNLIANNIIDTATEGIKMGNTVGNEFMGNVITNTADLRFRNSSGVIWKDNDIPVGVDIDPEGSCFTSDSDIAQLGEEAIVC 390          
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 4.150e-32
Identity = 107/218 (49.08%), Postives = 133/218 (61.01%), Query Frame = 0
Query:  125 GFDPHDDSDNLRIHNNIVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDYSGNHCTDNKYGIRWSVGASHNKIYDNEIYNXXXXGIYMYLGSDPAGVPENTTYYTGGLPSFNIIANNLVDTATEGIKIGDTVGNEFTGNVFRNTDTLRFRDSPQTIWKDNVIPAGLKIDPEGACFVAGSDMDQL 342
            GFDPHDDSDNLRIHNNIVY NGNHGIIASKRC    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 + S N CTDN+ GIR S+G+S+NKI+DN++ +     +++YLGSD        +  T G+ + N+  NN +D A+ G+K  +T  N   GN     +     DS   +W DN +    +I  E  C  + SD DQ+
Sbjct:  278 GFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEI----IASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVEESLIDDSDGLLWSDNEVEDDFEIGIETTCLSSESDFDQI 491          
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.210e-24
Identity = 88/220 (40.00%), Postives = 106/220 (48.18%), Query Frame = 0
Query:  125 GFDPHDDSDNLRIHNNIVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GDYSGNHCTDNKYGIRWSVGASHNKIYDNEIYNXXXXGIYMYLGSDPAGVPENTTYYTGGLPSFNIIANNLVDTATEGIKIGDTVGNEFTGNVFRNTDTLRFRDSPQTIWKDN--VIPAGLKIDPEGACFVAGSDMD 340
            GFDPHDDSD L IH+N VY NGNHGIIASKRCN   XXXXXXXX                       XX               D S N   DNKYG+R SVG + N    N I +     +Y Y GSD   V ++      G    NI ++N +    E IK+    G EF  N F++  T+RF D+  TI   N  +  A LK+  +GACF   SD D
Sbjct:  108 GFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDS------GRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLGSATLKVS-KGACFDKKSDSD 320          
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 4.790e-24
Identity = 111/213 (52.11%), Postives = 128/213 (60.09%), Query Frame = 0
Query:  125 GFDPHDDSDNLRIHNNIVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDYSGNHCTDNKYGIRWSVGASHNKIYDNEIYNXXXXGIYMYLGSDPAGVPENTTYYTGGLPSFNIIANNLVDTATEGIKIGDTVGNEFTGNVFRNTDTLRFRDSPQTIWKDNVIPAGLKIDPEGACFVAGS 337
            GFDPHDDSD+L I  N VYGNGNHGIIASKRCN+V   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        +   N   + KYGIR S+G++ N I+DN   +    G+Y Y GSD   V  N      G    N    N +      +KI +   N FT NVF N  T  F DS  T+W +N I  G  +D E   F +GS
Sbjct:  636 GFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGND-----GRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIGGGC-LD-ESTDFASGS 841          
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.720e-23
Identity = 76/223 (34.08%), Postives = 95/223 (42.60%), Query Frame = 0
Query:  125 GFDPHDDSDNLRIHNNIVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDYS--GNHCTDNKYGIRWSVGASHNKIYDNEIYNXXXXGIYMYLGSDPAGVPENTTYYTGGLPSFNIIANNLVDTATE--GIKIGDTVGNEFTGNVFRNTDTLRFRDSPQTIWKDNVIPAGLKIDPEGACFVAGSDMDQLG 343
            GFDPHDDSD+L I NNIVYGNGNHGIIASKRCN+V                                               D +   N  T+ +YGIR S+G+  N I +N        G+Y Y+GSD   VP +      G PS N+   N ++T  +  G+ I +   N F  NVF    T  F DS  T W DN           G C    +D  + G
Sbjct:  420 GFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSN-----GRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT---------GGGCLDGSTDFAEGG 628          
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 2.960e-23
Identity = 75/216 (34.72%), Postives = 94/216 (43.52%), Query Frame = 0
Query:  125 GFDPHDDSDNLRIHNNIVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDYS--GNHCTDNKYGIRWSVGASHNKIYDNEIYNXXXXGIYMYLGSDPAGVPENTTYYTGGLPSFNIIANNLVDTATEGIKIGDTVGNEFTGNVFRNTDTLRFRDSPQTIWKDNVIPAGLKIDPEGACFVAGSD 338
            GFDPHDDSD L I  N VY N NHGIIASKRCN+V                                               D    GN     KYGIR S+G+ +N++Y N   +    G+Y Y GSD   V +       G PS N++A NLV+    G+KI +   NEF  N F N D   F +S  T+W  N I  G   + +     +GSD
Sbjct:  672 GFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSD-------GRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDGCIEEDDEFDAASGSD 880          
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.580e-22
Identity = 92/220 (41.82%), Postives = 111/220 (50.45%), Query Frame = 0
Query:  125 GFDPHDDSDNLRIHNNIVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GDYSGNHCTDNKYGIRWSVGASHNKIYDNEIYNXXXXGIYMYLGSDPAGVPENTTYYTGGLPSFNIIANNLVDTATEGIKIGDTVGNEFTGNVFRNTDTLRFRDSPQTIWKDNVIPAGLKIDP----EGACFVAGSD 338
            GFDPHDDSD L IH+N VY NG HGIIASKRCN VS                    XXXXXXXXXXXXXXXX            D S N   +NKYGIR+SVG+  N  ++N I        Y YLGSD   V ++      G    N+   N +    E IK+ D  G +F  N F +  T+RF D+ +T+   N+   GL +       GA F A SD
Sbjct:  282 GFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDS------GRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNI---GLNMSKLKVVNGASFDASSD 492          
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Match: A0A6H5K1D5_9PHAE (MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D5_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 5.980e-21
Identity = 71/213 (33.33%), Postives = 93/213 (43.66%), Query Frame = 0
Query:  125 GFDPHDDSDNLRIHNNIVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--DYSGNHCTDNKYGIRWSVGASHNKIYDNEIYNXXXXGIYMYLGSDPAGVPENTTYYTGGLPSFNIIANNLVDTATEGIKIGDTVGNEFTGNVFRNTDTLRFRDSPQTIWKDNV-IPAGLKID-PEGACF 333
            G+DPHDDSD L IH+N+VY N  HGIIASKRCN+VS                                                + SGN    NKYGIR SVG   N +Y+N + N     IY Y GSDPA V         G    NI  +N V    + IK+ ++ G   T NVF     + F ++ + +   NV +    +++  E ACF
Sbjct:   74 GYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVYNNTMTNTSQYAIYTYQGSDPAEVQPT------GRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGVVEFSNTTENVVTGNVGLEDATEVELVEPACF 280          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1846.5365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9I9_9PHAE2.360e-6468.44MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G1G2_ECTSI3.100e-3750.68Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LKL1_ECTSI5.710e-3562.62Mannuronan C-5 epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G1G1_ECTSI4.150e-3249.08Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ9_9PHAE1.210e-2440.00Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FWE8_ECTSI4.790e-2452.11Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7G8D9_ECTSI1.720e-2334.08Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LC73_ECTSI2.960e-2334.72Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
Q7XAJ7_9PHAE1.580e-2241.82Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
A0A6H5K1D5_9PHAE5.980e-2133.33MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 267..288
e-value: 2000.0
score: 5.0
coord: 226..248
e-value: 2.6
score: 17.0
coord: 180..202
e-value: 0.35
score: 19.9
coord: 289..328
e-value: 4900.0
score: 2.3
coord: 203..224
e-value: 3400.0
score: 3.5
coord: 132..154
e-value: 4.7
score: 16.2
coord: 156..178
e-value: 12.0
score: 14.8
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 121..266
e-value: 2.2E-37
score: 130.8
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 153..302
e-value: 1.3E-15
score: 57.6
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 155..194
e-value: 5.3E-6
score: 24.0
NoneNo IPR availablePANTHERPTHR22990:SF15F-BOX ONLY PROTEIN 10coord: 137..304
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 137..304
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..349
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 128..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1846contigL-elsbetiae_contig1846:15026..18839 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1846.5365.1mRNA_L-elsbetiae_contig1846.5365.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1846 14791..19987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1846.5365.1 ID=prot_L-elsbetiae_contig1846.5365.1|Name=mRNA_L-elsbetiae_contig1846.5365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=350bp
MYLSLFVFAIACFPDRSEDARAPSTERINSFSIEQTAVTVGLMEPLRPHP
PSSVVRRSFLSFISRFTGDLVLSWGCSGSGCACARARDMSIIHAIRFFDA
ILSTLFRAPSIYACPLFFPVEQRAGFDPHDDSDNLRIHNNIVYGNGNHGI
IASKRCNDVSIQNNIVFDNLNAGIMLHRSSDHAIVRNNTISNSGDSCIAI
FESMEGDYSGNHCTDNKYGIRWSVGASHNKIYDNEIYNSDQYGIYMYLGS
DPAGVPENTTYYTGGLPSFNIIANNLVDTATEGIKIGDTVGNEFTGNVFR
NTDTLRFRDSPQTIWKDNVIPAGLKIDPEGACFVAGSDMDQLGPEAILC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR022441Para_beta_helix_rpt-2
IPR011050Pectin_lyase_fold/virulence