prot_L-elsbetiae_contig1840.5341.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1840.5341.1
Unique Nameprot_L-elsbetiae_contig1840.5341.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length531
Homology
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BLAST of mRNA_L-elsbetiae_contig1840.5341.1 vs. uniprot
Match: D8LH58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH58_ECTSI)

HSP 1 Score: 832 bits (2150), Expect = 4.540e-301
Identity = 431/530 (81.32%), Postives = 466/530 (87.92%), Query Frame = 0 
Query:    1 MRPWNYFALMSSIGFGLQRGFGYAFTSSTFRGPVATGTVARSAIAPSRRRGRSSTAVRMASSFDPIKAAQAVKEAMDGGGKVNPVYRQMVVLAVSSGAAGATRYFKPSGQG---TDRRGLTKAIQAHVGQLMDAVLSPKPDEENAQAIARILDRCEEQHKGAGATLALGYLDTVWWLPAPIRPEIGALAILAVYEALRRFGVFTRFGTVKLPDAELVPTGNIPDPIEDMEDTPIFKAAQFETDARVLSYYTLIGAFLFSTLSYVVSGCDGHMAWTGILMLSFVAFEREVLHSALYSEAIIRIQPMLVHLTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNIINAELSTARIWLPEELLTGPSSLPEQPRLNAHMTYPWEDPARLPNLLALDFSSSEIPNEDRVAPFDTKGRHAMSNRMALTSMGGIAGEMMANGFDVGGGADYFNMRRRFKGLWPYMSQDDLRITEKWAFLENLHIFQAERTAMELLAKNMRERRSIGRLMLDLDRSLAATEYELTAA 527
            MRPW    L++SIG G QRGFGYAFTSS      +  + ++   A SRR   SST +RMASSF+PI   +AVKEAM G G+VNPVYRQMVVLAV SGAAGA RY  PSG+    T +R L KA+QAHVGQLMDAVLSP PDEENA+AI RILDRCEEQHKGAGATLALGYLDTVWWLPAPIRP IGALAILAVYEALRRFGVFTRFG VKLPD EL PT  +P+P+E MED+PIFKAAQFETDAR LSYYTLIGAFL ST+SYV+SG DG +AW+G+L+L+FVAFEREVLHSALYSEAIIR+QPML  LTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNIINAELSTARIWLPEELLTGP+S PE PRL A MTYPWEDPARL NL+ LDFSSSEIP++DRVAPFDT+GRHAMSNRMALTSMGGIAGEMMANGFDVGGGADYFNMRRRFKGLWPYMSQDDLR TEKWAFLENL IF+AERTAMELLAKNMRERR IGRLMLDLDRSL +TE+EL+AA
Sbjct:    1 MRPWTALGLIASIGVGFQRGFGYAFTSSKV---TSFPSSSKGTPASSRRHAMSSTQLRMASSFNPI---EAVKEAMGGDGRVNPVYRQMVVLAVKSGAAGAARYLNPSGESSTSTGKRALNKAVQAHVGQLMDAVLSPAPDEENAEAIKRILDRCEEQHKGAGATLALGYLDTVWWLPAPIRPAIGALAILAVYEALRRFGVFTRFGMVKLPDTELAPTETVPEPVEGMEDSPIFKAAQFETDARSLSYYTLIGAFLVSTMSYVISGGDGQVAWSGMLLLTFVAFEREVLHSALYSEAIIRVQPMLTQLTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNIINAELSTARIWLPEELLTGPASEPE-PRLEARMTYPWEDPARLQNLVELDFSSSEIPHKDRVAPFDTEGRHAMSNRMALTSMGGIAGEMMANGFDVGGGADYFNMRRRFKGLWPYMSQDDLRRTEKWAFLENLKIFKAERTAMELLAKNMRERRPIGRLMLDLDRSLTSTEFELSAA 523
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1840.5341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH58_ECTSI4.540e-30181.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33471FAMILY NOT NAMEDcoord: 294..509
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..530
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1840contigL-elsbetiae_contig1840:13456..19203 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1840.5341.1mRNA_L-elsbetiae_contig1840.5341.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1840 13411..19557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1840.5341.1 ID=prot_L-elsbetiae_contig1840.5341.1|Name=mRNA_L-elsbetiae_contig1840.5341.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=531bp
MRPWNYFALMSSIGFGLQRGFGYAFTSSTFRGPVATGTVARSAIAPSRRR
GRSSTAVRMASSFDPIKAAQAVKEAMDGGGKVNPVYRQMVVLAVSSGAAG
ATRYFKPSGQGTDRRGLTKAIQAHVGQLMDAVLSPKPDEENAQAIARILD
RCEEQHKGAGATLALGYLDTVWWLPAPIRPEIGALAILAVYEALRRFGVF
TRFGTVKLPDAELVPTGNIPDPIEDMEDTPIFKAAQFETDARVLSYYTLI
GAFLFSTLSYVVSGCDGHMAWTGILMLSFVAFEREVLHSALYSEAIIRIQ
PMLVHLTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNI
INAELSTARIWLPEELLTGPSSLPEQPRLNAHMTYPWEDPARLPNLLALD
FSSSEIPNEDRVAPFDTKGRHAMSNRMALTSMGGIAGEMMANGFDVGGGA
DYFNMRRRFKGLWPYMSQDDLRITEKWAFLENLHIFQAERTAMELLAKNM
RERRSIGRLMLDLDRSLAATEYELTAAIKS*
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