prot_L-elsbetiae_contig18319.5308.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig18319.5308.1
Unique Name	prot_L-elsbetiae_contig18319.5308.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	99

Homology

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BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 2.510e-37
Identity = 67/76 (88.16%), Postives = 72/76 (94.74%), Query Frame = 0

Query:    2 ASKPTYNVMVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            ++KPTYN MVFDAIKTLKER+GSSIQAIKKSITAT P+LNFTPHQMRSALKKGVESGKFIK+K SYKLS EAKKPA
Sbjct:    3 STKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPA 78

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BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 6.410e-37
Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0

Query:    3 SKPTYNVMVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            +KPTYNVMVFDAIKTLKER+GSSIQAIKKSITAT P+LNFTPHQMR ALKKGVESGKFIK+K SYKLSPEAKKPA
Sbjct:   97 AKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPA 171

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BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 2.530e-34
Identity = 63/75 (84.00%), Postives = 67/75 (89.33%), Query Frame = 0

Query:    3 SKPTYNVMVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            +KPTY+VMVFDAIK LKER GSS+ A+KK I AT PSLNFTPHQMRSALKKG ESGKFIKVK SYKLSPEAKKPA
Sbjct:    5 AKPTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79

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BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 4.260e-32
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0

Query:   10 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            MVFDAIKTLKER+GSSIQAIKKSITAT P+LNFTPHQMRSALKKGVESGKF+K+K SYKLS EAKKPA
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPA 68

[Close]

BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 8.590e-31
Identity = 60/67 (89.55%), Postives = 64/67 (95.52%), Query Frame = 0

Query:   10 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKP 76
            MVFDAIK+LKER+GSSIQAIKKSITAT P+LNFTPHQMRSALKKGVE+GKFIKVK SYKLS EAKKP
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKP 67

[Close]

BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 3.490e-30
Identity = 58/68 (85.29%), Postives = 60/68 (88.24%), Query Frame = 0

Query:   10 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            MVFDAIK LKER GSS+ A+KK I AT PSLNFTPHQMRSALKKG ESGKFIKVK SYKLSPEAKKPA
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68

[Close]

BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 4.950e-25
Identity = 50/62 (80.65%), Postives = 58/62 (93.55%), Query Frame = 0

Query:   10 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSP 71
            MVFDAIKTLKER+GSSIQA+KKSITAT P+L+FTPHQMRSALKKGVE+GKFIKV+ +  L+P
Sbjct:    1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLAP 62

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BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 9.860e-24
Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 0

Query:    5 PTYNVMVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKP 76
            PTY+ M   AI  LKER+GSS+ AIKK I AT P+LNF PHQ+R ALKKG E+G FIKVK SYK+SPEAKKP
Sbjct:    2 PTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73

[Close]

BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 2.510e-22
Identity = 51/73 (69.86%), Postives = 59/73 (80.82%), Query Frame = 0

Query:    5 PTYNVMVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            PTY+ M  +A+K LKER+GSS+ AIKK ITA+ PSL FT H MRSALKKGVESGKFIKVK SYKLS   ++PA
Sbjct:    2 PTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPA 74

[Close]

BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.920e-20
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0

Query:    5 PTYNVMVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLS 70
            PTY+ M  +A+K LKER+GSS+ AIKK ITA+ PSL FT H +RSALKKGVESGKFIKVK SYKLS
Sbjct:    2 PTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLS 67

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig18319.5308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LQ80_ECTSI	2.510e-37	88.16	Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A6H5KCU1_9PHAE	6.410e-37	90.67	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7G4I5_ECTSI	2.530e-34	84.00	H15 domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A6H5KST0_9PHAE	4.260e-32	89.71	H15 domain-containing protein n=6 Tax=Ectocarpus T...	[more]
D8LQ75_ECTSI	8.590e-31	89.55	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JHR9_9PHAE	3.490e-30	85.29	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K9S6_9PHAE	4.950e-25	80.65	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LMF1_ECTSI	9.860e-24	69.44	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LJB8_ECTSI	2.510e-22	69.86	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JIM8_9PHAE	1.920e-20	72.73	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 1..66 e-value: 3.0E-21 score: 86.6
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 4..69 e-value: 1.1E-20 score: 73.7
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 3..71 score: 30.12
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..84 e-value: 4.1E-20 score: 73.7
None	No IPR available	PANTHER	PTHR11467:SF100		coord: 3..91
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 3..91
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 3..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig18319	contig	L-elsbetiae_contig18319:1991..3126 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig18319.5308.1	mRNA_L-elsbetiae_contig18319.5308.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig18319 1991..3126 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig18319.5308.1 ID=prot_L-elsbetiae_contig18319.5308.1|Name=mRNA_L-elsbetiae_contig18319.5308.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp
MASKPTYNVMVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSA
LKKGVESGKFIKVKGSYKLSPEAKKPAPKPKKKVVKKVVKKVVKKKVKK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005818	Histone_H1/H5_H15
IPR036388	WH-like_DNA-bd_sf
IPR036390	WH_DNA-bd_sf