prot_L-elsbetiae_contig183.5303.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig183.5303.1
Unique Nameprot_L-elsbetiae_contig183.5303.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length614
Homology
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BLAST of mRNA_L-elsbetiae_contig183.5303.1 vs. uniprot
Match: D8LKF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF9_ECTSI)

HSP 1 Score: 569 bits (1467), Expect = 3.000e-194
Identity = 378/654 (57.80%), Postives = 435/654 (66.51%), Query Frame = 0 
Query:    1 VAGTLFPSPEPQPAPIDRWARGWVVSRSTTPCDWSRSRLGSPGDNCSEENRSLRSARSIGASLTSAHRHGGG---HGRRRSLHSH-KEDETELPFAIAPQVREDQSLPPWIP-----VKGKTTQKVVKGGRGGR-------------RGXXAGGDNSRGXXGTNGSENDRHQERADSDLRDDDVDSRVEELGGREWTIDGSGELLIVERPQGDAMPKTVVSALYNFRDIKDK----EDGSAGVAQNEPSVGGXXXXXXXXXXXXXXXXXXXXXXALARVNKQPGSALRRASRXXXXXXXAAGRRRGSGMFFELEPTLQPNLTNSVDRPGAGVSVSDGSSFKEGPSWPQDPHHMSRGEYQDRQRKQDLSDASTLDCGEDASTLGFSLGSVQSAPALGGLGLGRGASGGPGGASPGAERGXXXXXXXXXXXS--GGTSITAFENVNPFAGGVRVASSTP-----QNFGGTAG--GDVSPMSASVGGQSGGKFFSGPGPETSSVGE-EDDPHLALVKDPEWGRNVRGSPKEVGYLPKVKQVSRERPMTHERPHTRNPRDPRHIPARKSPHVSPKGNNPEGAEGDDVLRVKAAAMAGIGKPSSFPSLPMSLNGWGVGRGGGSGGHGGTT-----RGMKDHSMITMAKPKEILVEGFLR 613
            +AGTLFPSPEP+  PIDRWARGWV SR TT  DW R   GS  D+ SE  RSLRS RS    +TSAHRHG     H R R   S  KED + +PF +AP+VREDQSLPP IP     +  K      K GRGG              R   +GG++  G     G++         SD ++DD+DSR+++LGGREWTIDG+GELLIV+R QGDAMPKTVVSALYNFRD++DK    E+G  GV                               + ++  K+   +LRRASRXXXXXXX   RRRGSG FFELEPTLQPNL NS+DRPG GVSVSDG S KEGPSWPQDP HMSR EY++RQR+QDL+ +S LD GEDAS+LGFSLGSVQSAPAL GLGLG   +   GG   G    XXXXXXXXXXX    GTSITAFE+VNPFAGG+RV +S P     +   G +G  GD+SP++ASVGGQSG  FF G GPE+SSVGE  DDPHLALVKDP+WGRNVRGSPKE GYLPKVKQVSRERP+THERP+TRNPRDPR++PAR + HVSPK N+     G +          G  K SSFPSLPMSL GWG G GGGS G GG       RG K   MITM KPKEI+V+G LR
Sbjct:    1 MAGTLFPSPEPETPPIDRWARGWVASRRTTVRDWDRFPRGSSSDDGSEGGRSLRSVRSTATGMTSAHRHGXXXXXHARHRPHSSSCKEDSSGVPFPLAPEVREDQSLPPTIPGHSVRMSRKGGDSRAKRGRGGHCAKRTGANRGEGGRRQGSGGESESGCLWDGGTDG--------SDRQEDDLDSRLKDLGGREWTIDGAGELLIVDRVQGDAMPKTVVSALYNFRDVRDKLAGGENGGGGVXXXXXXXLDGGKRHRDGSGVGKTRGSISGSASFSKERKRSSLSLRRASRXXXXXXXXXXRRRGSGAFFELEPTLQPNLANSLDRPGPGVSVSDGGSLKEGPSWPQDPEHMSRSEYRERQRRQDLTGSSMLDGGEDASSLGFSLGSVQSAPALRGLGLGLNGNAAAGGGRDGGXXXXXXXXXXXXXXGVGRGTSITAFEDVNPFAGGIRVDTSPPAGGDGRGAAGASGTRGDLSPLTASVGGQSG-SFFPGAGPESSSVGETSDDPHLALVKDPDWGRNVRGSPKEAGYLPKVKQVSRERPLTHERPYTRNPRDPRNVPARPNAHVSPK-NSTSSRVGCNADPQYTGDDGGSTK-SSFPSLPMSLTGWGEGGGGGSLGKGGGVPGRPMRGKKGRGMITMTKPKEIIVQGLLR 643
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig183.5303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKF9_ECTSI3.000e-19457.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig183contigL-elsbetiae_contig183:42921..47939 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig183.5303.1mRNA_L-elsbetiae_contig183.5303.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig183 42921..47939 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig183.5303.1 ID=prot_L-elsbetiae_contig183.5303.1|Name=mRNA_L-elsbetiae_contig183.5303.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=614bp
VAGTLFPSPEPQPAPIDRWARGWVVSRSTTPCDWSRSRLGSPGDNCSEEN
RSLRSARSIGASLTSAHRHGGGHGRRRSLHSHKEDETELPFAIAPQVRED
QSLPPWIPVKGKTTQKVVKGGRGGRRGNRAGGDNSRGGGGTNGSENDRHQ
ERADSDLRDDDVDSRVEELGGREWTIDGSGELLIVERPQGDAMPKTVVSA
LYNFRDIKDKEDGSAGVAQNEPSVGGGGGGRGRGGGAGRRKSSSKSASAL
ARVNKQPGSALRRASRRRSSRRVAAGRRRGSGMFFELEPTLQPNLTNSVD
RPGAGVSVSDGSSFKEGPSWPQDPHHMSRGEYQDRQRKQDLSDASTLDCG
EDASTLGFSLGSVQSAPALGGLGLGRGASGGPGGASPGAERGGGRRAVSG
GGGSGGTSITAFENVNPFAGGVRVASSTPQNFGGTAGGDVSPMSASVGGQ
SGGKFFSGPGPETSSVGEEDDPHLALVKDPEWGRNVRGSPKEVGYLPKVK
QVSRERPMTHERPHTRNPRDPRHIPARKSPHVSPKGNNPEGAEGDDVLRV
KAAAMAGIGKPSSFPSLPMSLNGWGVGRGGGSGGHGGTTRGMKDHSMITM
AKPKEILVEGFLR*
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