prot_L-elsbetiae_contig183.5301.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig183.5301.1
Unique Nameprot_L-elsbetiae_contig183.5301.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length289
Homology
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Match: A0A6H5KVJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ1_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 1.320e-103
Identity = 175/206 (84.95%), Postives = 181/206 (87.86%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGITAPYKVILDGNFIHGCISSNVDIEQRLASVLQGAAMHLFVPTSARAELKALGPEFQKAYNFAIGRCRGLPLAPNRTSAAGADEEGXXXXXXXXXXXXX-DPAKEILATIGAANEGKYLVASQDENLRVRLRRVPGCPLVFVSRTVLLMEQPSGKSKAEFEKAERKKAVGTTEEEDRVLGILKKR 205
            MRVTRAKQYRRHLRFFRIVYGI+APYKVILDGNFIHGCISS VDIE+RL SVLQGA MHLFVP SAR ELKALGPEFQKAYNFAIG CRGLP   N   A GA    XXXXXXXXX     DPAKEI+A IGA NEGKYLVASQDENLR+RLRRVPGCPLVFVSRTVL+MEQPSGKSKAEFEKAERKKAVGTTEEEDRVL +LKKR
Sbjct:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSKVDIEKRLTSVLQGAKMHLFVPRSAREELKALGPEFQKAYNFAIGHCRGLPPPRNENQAGGAXXXXXXXXXXXXXGEKGPDPAKEIIAAIGADNEGKYLVASQDENLRMRLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERKKAVGTTEEEDRVLAVLKKR 206          
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Match: A0A836CFL8_9STRA (Fcf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL8_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.700e-52
Identity = 103/207 (49.76%), Postives = 135/207 (65.22%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGITAPYKVILDGNFIHGCISSNVDIEQRLASVLQGAAMHLFVPTSARAELKALGPEFQKAYNFAIGRCRGLPL-APNRTSAAGADEEGXXXXXXXXXXXXXDPAKEILATIGAANEGKYLVASQDENLRVRLRRVPGCPLVFVSRTVLLMEQPSGKSKAEFEKAERKKAVGTTEEEDRVLGILKKRE 206
            MR+TRAKQYRR LRFFRIVYG+ APYKV+LDGNFIH C++  V++ +R+ +VLQG    L VP +A  EL+ALG +FQ A  FA   C+ +   AP + S                      PA++I A I + N  +Y+VASQDE LR +LR V GCPL+++S+TVLLMEQ SGK+KA FE  ER+K  G TEEE  ++  L++ E
Sbjct:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGS----------------------PAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRK-TGVTEEETAIVEQLRQEE 184          
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Match: D8LKG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG1_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 5.250e-51
Identity = 103/128 (80.47%), Postives = 106/128 (82.81%), Query Frame = 0
Query:   58 MHLFVPTSARAELKALGPEFQKAYNFAIGRCRGLPLAPNRTSAAGADEEGXXXXXXXXXXXXX-DPAKEILATIGAANEGKYLVASQDENLRVRLRRVPGCPLVFVSRTVLLMEQPSGKSKAEFEKAE 184
            MHLFVP SAR ELKALGPEFQKAYNFAIG CRGLP   N   A       XXXXXXXXXX    DPAKEI+A IGA NEGKYLVASQDENLRVRLRR+PGCPLVFVSRTVL+MEQPSGKSKAEFEKAE
Sbjct:    1 MHLFVPRSAREELKALGPEFQKAYNFAIGHCRGLPPPRNENQAXXXXXXXXXXXXXXXXXEKGPDPAKEIVAAIGADNEGKYLVASQDENLRVRLRRIPGCPLVFVSRTVLVMEQPSGKSKAEFEKAE 128          
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Match: A0A7S2B5Q5_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5Q5_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.610e-31
Identity = 77/203 (37.93%), Postives = 108/203 (53.20%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGITAPYKVILDGNFIHGCISSNVDIEQRLASVLQGAAMHLFVPTSARAELKALGPEFQKAYNFAIGRCRGLPLAPNRTSAAGADEEGXXXXXXXXXXXXXDPAKEILATIGAANEGKYLVASQDENLRVRLRRVPGCPLVFVSRTVLLMEQPSGKSKAEFEKAERKKAVGTTEEEDRVLGILK 203
            MR+ R K+ R+ L FFR+ +GI+ PY+V+LDGNFIH C S  +DI  RL   L G    L+VP+   +EL+ LG   + A  FA+  C  +      + +AG                       IL  IG  N   YLVASQDE+LR  LR +PG PL+F+ RTVL++E     SK    + E KK V    +E + +G+++
Sbjct:    1 MRLLRGKKARKTLAFFRLNFGISPPYRVLLDGNFIHECTSYKIDILARLGKQLGGEKFMLYVPSCVISELEMLGTNMKPALTFALENCEVVACDSAESCSAG-----------------------ILGLIGEKNAEGYLVASQDEDLRCELRAIPGVPLMFIKRTVLILESTGHASKTATVQMETKK-VAVVGDESKAMGLVR 179          
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Match: W7T2Y0_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Y0_9STRA)

HSP 1 Score: 126 bits (317), Expect = 4.360e-31
Identity = 77/197 (39.09%), Postives = 105/197 (53.30%), Query Frame = 0
Query:   10 RRHLRFFRIVYGITAPYKVILDGNFIHGCISSNVDIEQRLASVLQGAAMHLFVPTSARAELKALGPEFQKAYNFAIGRCRGLPLAPNRTSAAGADEEGXXXXXXXXXXXXXDPAKEILATIGAANEGKYLVASQDENLRVRLRRVPGCPLVFVSRTVLLMEQPSGKSKAEFEKAERKKAVGTTEEEDRVLGILKKRE 206
            R+ LRF+RIVYGIT PYK+++DGNFIH  +   +DI  RL  +L    +  + P +   EL A+GP+F+ A+ +    C    L PN T     D+ G                  I   +G  N  KY+VA+QD+ L+ RLR VP   L+FVSR V LME PS  S+    K E +K    TEEE  +L  L+ +E
Sbjct:    2 RKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCC---DLVPNPTIKTNHDDSGKNYV---------SAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKE 186          
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Match: A0A7S2B6T0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6T0_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.630e-24
Identity = 65/182 (35.71%), Postives = 91/182 (50.00%), Query Frame = 0
Query:   22 ITAPYKVILDGNFIHGCISSNVDIEQRLASVLQGAAMHLFVPTSARAELKALGPEFQKAYNFAIGRCRGLPLAPNRTSAAGADEEGXXXXXXXXXXXXXDPAKEILATIGAANEGKYLVASQDENLRVRLRRVPGCPLVFVSRTVLLMEQPSGKSKAEFEKAERKKAVGTTEEEDRVLGILK 203
            +   Y+V+LDGNFIH C S  +DI  RL   L G    L+VP+   +EL+ LG   + A  FA+  C  +      + +AG                       IL  IG  N   YLVASQDE+LR  LR +PG PL+F+ RTVL++E     SK    + E KK V    +E + +G+++
Sbjct:    9 VACSYRVLLDGNFIHECTSYKIDILARLGKQLGGEKFMLYVPSCVISELEMLGTNMKPALTFALENCEVVACDSAESCSAG-----------------------ILGLIGEKNAEGYLVASQDEDLRCELRAIPGVPLMFIKRTVLILESTGHASKTATVQMETKK-VAVVGDESKAMGLVR 166          
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Match: D8LKG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG2_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.190e-23
Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGITAPYKVILDGNFIHGCISSNVDIEQRLASVLQ 54
            MRVTRAKQYR+HLRFFRIVYGI+APYKVILDGNFIHGCISS VDIE+RL SVLQ
Sbjct:    1 MRVTRAKQYRKHLRFFRIVYGISAPYKVILDGNFIHGCISSKVDIEKRLTSVLQ 54          
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Match: A0A7S1C1L6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C1L6_9STRA)

HSP 1 Score: 105 bits (262), Expect = 6.820e-23
Identity = 71/190 (37.37%), Postives = 104/190 (54.74%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGITAPYKVILDGNFIHGCISSNVDIEQRLASVLQGA--AMHLFVPTSARAELKALGPEF----QKAYNFAIGRCRGLPLAPNRTSAAGADEEGXXXXXXXXXXXXXDPAKEILATIGAANEGKYLVASQDENLRVRLRRVPGCPLVFVSRTVLLMEQPSGKSKAEFEKAE 184
            MR+ R KQ+R+ LRF+R++Y ++ P+KV+LDGNFIH  + ++ +I++ L S+LQ     + LFV      EL++LG EF     +A  F + RC             G D                  A+ I + IG  N+  + VASQD  LR RLR V G P++ +S++VL++EQPS  SK   EK E
Sbjct:   37 MRILRQKQHRKILRFYRMMYNVSPPFKVLLDGNFIHIGLRTSAEIKRLLPSLLQERPDVVRLFVTPCILNELRSLGAEFGDTLAEARTFRVARC-----------GHGDDP--------------VSAAECIASLIGTKNKEHFFVASQDGLLRSRLRAVAGTPIILLSQSVLVLEQPSDASKGLVEKNE 201          
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Match: W4H7D3_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7D3_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.070e-21
Identity = 71/173 (41.04%), Postives = 93/173 (53.76%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGITAPYKVILDGNFIHGCISSNVDIEQRLASVLQGAAMHLFVPTSARAELKALGPEFQKAYNFAIGRCRGLPLAPNRTSAAGADEEGXXXXXXXXXXXXXDPAKEILATIGAANEGKYLVASQDENLRVRLRRVPGCPLVFVSRTVLLMEQPS 173
            MR  RAK  R+ LR F+ + GI  PYKV+LDGNFI  CI  +VDI  RL S LQ      FV  +   ELK L  +              +  A    SA    E G  XXXX       D    ++A +GA N+ K++VA+Q+  LR RLRRVPG PL++++R+VL+ E  S
Sbjct:    1 MRYLRAKHIRKSLRQFQFLCGIKPPYKVLLDGNFIAMCIKMHVDIAVRLPSFLQTDKCTYFVTRAVLDELKLLSDDAD------------MRAAWEAASAFEVVEGGSDXXXXT------DVTSSMVAAVGARNDKKFIVATQETELRGRLRRVPGVPLIYLNRSVLVFEDMS 155          
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Match: F0WJZ3_9STRA (rRNAprocessing protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJZ3_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.720e-21
Identity = 69/204 (33.82%), Postives = 103/204 (50.49%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGITAPYKVILDGNFIHGCISSNVDIEQRLASVLQGAAMH--LFVPTSARAELKALGPEFQKAYNFAIGRCRGLPLAPNRTSAAGADEEGXXXXXXXXXXXXXDPAKEILATIGAANEGKYLVASQDENLRVRLRRVPGCPLVFVSRTVLLMEQPSGKSKAEFEKAERKKAVGTTEEEDRVLGIL 202
            MR  RAK  R+ LR F+ + GI  PYKV+LD NFI  C  + V++++R+A  LQ        F+P  +  ELK +G   +            + +     S A  D                D  KEILA IG  N GKY+VA+Q+  LR +LR++PG PL++++R+VL+ E  S  + A   + E+ K     E E + L ++
Sbjct:    1 MRYLRAKAIRKALRQFQFLCGIKPPYKVLLDINFIAMCHQAKVELKERVAKFLQVKLYQCEFFIPEKSIQELKLIGDSMKPVLES-------IKMFSVIESKASEDS--------------VDMTKEILAIIGECNAGKYIVATQEVELRKQLRQIPGVPLIYLNRSVLVFEDISRATVAIVRQKEQSKLAKLDEAEKQTLEVV 183          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig183.5301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVJ1_9PHAE1.320e-10384.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CFL8_9STRA1.700e-5249.76Fcf1-domain-containing protein n=1 Tax=Tribonema m... [more]
D8LKG1_ECTSI5.250e-5180.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2B5Q5_9STRA1.610e-3137.93Hypothetical protein n=3 Tax=Dictyocha speculum Ta... [more]
W7T2Y0_9STRA4.360e-3139.09Uncharacterized protein n=4 Tax=Monodopsidaceae Ta... [more]
A0A7S2B6T0_9STRA5.630e-2435.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D8LKG2_ECTSI1.190e-2390.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1C1L6_9STRA6.820e-2337.37Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
W4H7D3_9STRA1.070e-2141.04Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
F0WJZ3_9STRA2.720e-2133.82rRNAprocessing protein putative n=1 Tax=Albugo lai... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006984rRNA-processing protein Fcf1/Utp23PFAMPF04900Fcf1coord: 122..171
e-value: 4.3E-9
score: 36.7
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..179
e-value: 1.9E-35
score: 124.0
NoneNo IPR availablePANTHERPTHR12416UNCHARACTERIZEDcoord: 1..279
NoneNo IPR availablePANTHERPTHR12416:SF3RRNA-PROCESSING PROTEIN UTP23 HOMOLOGcoord: 1..279
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 25..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig183contigL-elsbetiae_contig183:28127..32973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig183.5301.1mRNA_L-elsbetiae_contig183.5301.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig183 28127..32973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig183.5301.1 ID=prot_L-elsbetiae_contig183.5301.1|Name=mRNA_L-elsbetiae_contig183.5301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp
MRVTRAKQYRRHLRFFRIVYGITAPYKVILDGNFIHGCISSNVDIEQRLA
SVLQGAAMHLFVPTSARAELKALGPEFQKAYNFAIGRCRGLPLAPNRTSA
AGADEEGGANDEGGAPQKGPDPAKEILATIGAANEGKYLVASQDENLRVR
LRRVPGCPLVFVSRTVLLMEQPSGKSKAEFEKAERKKAVGTTEEEDRVLG
ILKKREREEREKARASQPKKRLKKKASAPNPLSAKKSSSSGGKGGGGGGG
GGGARAKVKAGPASASEGGGSRVRRKRKKSPQSPGSSGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006984Fcf1/Utp23
IPR029060PIN-like_dom_sf