prot_L-elsbetiae_contig1829.5294.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1829.5294.1
Unique Nameprot_L-elsbetiae_contig1829.5294.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1176
Homology
BLAST of mRNA_L-elsbetiae_contig1829.5294.1 vs. uniprot
Match: D7FZF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF1_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 5.860e-88
Identity = 394/894 (44.07%), Postives = 457/894 (51.12%), Query Frame = 0
Query:  317 EGNRVVDAVLHVIKLGWPWPHEKTSSDKTRSAQXXXXXXXXXXXXXXXXXXXXXXHPETVEEVNQLFETVVGMIKLGIKLGWPWTPESSGSTASSASAAGRQQDPTPQ-EGTSEIFSAGGRTTAPRNQPQQQGLEDGGNDDSGAASRGRRLTFSRVRGAIEQPLSILGKPLVRVIRAGSRAGSSAT----TTGSAVGTRLLSGNGPAPP-----LISLPPAAAALRQAGSERSGSSPDPDARRRWQPPQAKRRRGKSLLPGSRHAPGVGASGSXXXXXXAQGSPERTTASGRGWTSPTIVLDENEWDMVAAEGRKGEXXXXXXXXXXXXXXXXXXXXXXRGVLSXXXXXXXXXXXXXXXXXXXXXXGG-----------RRGEPKEATPEQPAYNRNRVGEWAAVQLSPLIPADANAARNANPGEEGG----------IPWWRAAAAVAVGVGAALYGPVSRLPALVFKGDDXXXXXXXXXXXXXXXXXXRDEGWQRGALSRAVEDAAEALRLPSARPLASSSSXXXPEESPLEPKPKLQQLXXXXXXXXXAGETYSGLRGRRRVALLVDKAAMTSRRARLWTLLKRKSRARAEPLLAGVDEGISTLSMLLTPSGLLPPLAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGSAPQAVGGAGWNVFGFFPKDKVVDDSSALP---VVLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDSTAVLDETEPNAVSAWPKSALVEGLDPRAQQVEAAIREALRSAFGYGLDIPTAGVPAETLEAATLAAGSAAVAEGTKQLLEGKASSPTARYLDDLSPAGGGSGGGDAVASIEAAEKGAADGLWMGGEAAAYAAGAAAG 1176
            EGN+VVDAVL+ I LGWPW       +K  S Q XXXXXXXXXXXXXXXXXXX                  GMIKLG+KLGWPWTPES+   A++ +  G     TP  +G S+          P    +++G+      DSG  +RG R +FSRV+ AI    ++LG  L+R       A  + T    T   A     ++G   APP      +SLPPAAAALR+     +G  P P  R  W+PP    R GKSL+      PGV                ER TA+                           XXXXXXXXXXXXXXXXX     +G                         GG           R  + +E      AYNRN VGEWA+V++SP     A+AA     G +            +PWW+A AAV VGVGAALY PV+RLP L+FK +                    +EG Q+G LS+ V+          ARP    +S       P EP+P       XXXXXXX   T SG R R+ VA LVD+AA  SRRARLWTLLKR+SRARAEPLL  VD  I    M LTPS LL P  E                                   ++ SAPQAVGGAGWN+FGFFPKDK  D   A P   V  EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     N+  A      P    AWPKSA ++GLDPRAQ VEAA+R+ALRSAFGYGL  PTAGVPAETLEAATLAAG+AAVAEG KQLLEGK+SSPT RYLD+L P G                    DGLW+G EAAAYAAGAAAG
Sbjct:   43 EGNQVVDAVLYAINLGWPWSQVAALGEKVVSPQLXXXXXXXXXXXXXXXXXXX------------------GMIKLGVKLGWPWTPESTSPAAAAPNQEGVMTGATPPLDGESKELPLSFPQVPPDPPQEEEGV-----GDSGPPTRGGR-SFSRVKEAIVG--TVLGSRLLRTTTTTGGAPGAITKRSSTADDAAPLPSVAGAPAAPPRSAAPTLSLPPAAAALRRIDGSSAG--PAPAGRAPWRPPGY--RWGKSLVSNMSGLPGV--------------ESERVTAT---TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGGVQGQQEEARQRQLSSRRMSVFRALSTTAGGVATRLPLMKKSRSDDAREQDLPDQAYNRNSVGEWASVEVSPPASTKADAAEGGANGAQXXXXXXXXXXXXVPWWQAGAAVLVGVGAALYRPVNRLPGLLFKDEKEEEQRRRQG----------EEGRQQGTLSQ-VDATTSPASFQLARPAEEVASV------PPEPRPN-----PXXXXXXXXXTTTSGSRARQGVAGLVDRAATMSRRARLWTLLKRRSRARAEPLLTSVDTSI----MSLTPSELLSPPVEEQETALSSSSGRGPEESIGGGAGNGDATAT-----SEVSAPQAVGGAGWNLFGFFPKDKFSDYLPAGPSPVVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVAKLAKASASWSKSGDTEDNEPEAXXXXXXP----AWPKSAWLKGLDPRAQ-VEAAMRDALRSAFGYGLVAPTAGVPAETLEAATLAAGNAAVAEGAKQLLEGKSSSPTGRYLDELGP-GXXXXXXXXXXXXXXXXXXXTDGLWLGAEAAAYAAGAAAG 852          
BLAST of mRNA_L-elsbetiae_contig1829.5294.1 vs. uniprot
Match: A0A6H5KSL4_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSL4_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 3.600e-70
Identity = 394/941 (41.87%), Postives = 470/941 (49.95%), Query Frame = 0
Query:  257 IMSAPL--EDAGNGDAQKRYESWGISASSVPTSAAPVREPEKPVAVQPSLGEPPPLEKQQ-------------TDEGNRVVDAVLHVIKLGWPWPHEKTSSDKTRSAQXXXXXXXXXXXXXXXXXXXXXXHPETVEEVNQLFETVVGMIKLGIKLGWPWTPESSGSTASSASAAGRQQDPTPQEGTSEIFSAGGRTTAPRNQPQQQGLEDGGNDDSGAASRGRRLTFSRVRGAIEQPLSILGKPLVRVIRA-GSRAGSSATTTG------SAVGTRLLSGNGPAPP-----LISLPPAAAALRQAGSERSGSSPDPDARRRWQPPQAKRRRGKSLLPGSRHAPGVGASGSXXXXXXAQGSPERTTAS---------------------GRGWT-SPTIVLDENEWDMVAAEGRKG--EXXXXXXXXXXXXXXXXXXXXXXRGVLSXXXXXXXXXXXXXXXXXXXXXXGGRRGEPKEATPEQPAYNRNRVGEWAAVQLSPLIPADANAARNANPGEEGG-IPWWRAAAAVAVGVGAALYGPVSRLPALVFKGDDXXXXXXXXXXXXXXXXXXRDEGWQRGALSRAVEDAAEALRLPSARPLASSSSXXXPEES---PLEPKPKLQQLXXXXXXXXXAGETYSGLRGRRRVALLVDKAAMTSRRARLWTLLKRKSRARAEPLLAGVDEGISTLSMLLTPSGLLPPLAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----KGSAPQAVGGAGWNVFGFFPKDKVVD--DSSALPVVLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDSTAVLDETEPNAVS---------------AWPKSALVEGLDPRAQQVEAAIREALRSAFGYGLDIPTAGVPAETLEAATLAAGSAAVAEGTKQLLEGK 1121
            +++APL  E +  G  Q+   SWG S SS+P    P R+P    A +P                          +EGN+VVDAVL+ I LGW W       +K  S Q XXXXXXXXXXXXXXXXXXXXX                    LG+KLGWPWTPES+     S +AA   Q+      + E+  +    T P + P+++G+ D     SG  +RG R +FSRV+ AI    ++LG  L+R      + AG+   TT        A     ++G   APP      +SLPPAAAALR+  ++ S   P P  R  W+PP    R GKSL+      P               G  ER TA+                     G GW+ S     DE      A  G +G  E                       GV +                             ++ +P+Q AY RN VGEWA+V++SP     AN A+          +PWW+A AAV VGVGAALY PV+RLP L+ K +  XXXXXX            +EG Q+G LS       +A + P++  LA  +     EE    P EP+P       XXXX   AG T SG R R+ VA LVD+AA  SRRARLWTLLKR+SRARAEPLLA VD  I    M LTPS LL P  E                                   A    + SAPQAVGGAGWN+FGFFPKDK  D   +   PVV  E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                AWPKSA ++GLDPRAQ VEAA+R+ALRSAFGYGL  PTAGVPAETLEAATLAAG+AAVAEG KQLLEGK
Sbjct:    1 MVAAPLGSERSTGGKQQRNPGSWGSSTSSLPM-LPPARQPSDVSAPRPPXXXXXXXXXXXXXXXXXXXXXXXXAEEGNQVVDAVLYAINLGWLWSQVAALGEKVVSPQLXXXXXXXXXXXXXXXXXXXXXXX------------------LGVKLGWPWTPEST-----SPAAAAPDQEGVMMGASKELPLS--LPTVPPDLPREEGVSD-----SGPPTRGGR-SFSRVKEAIVG--TVLGSRLLRTTTTMTTTAGAPGATTKRSCTAHEAAPLTSVAGAPAAPPRSAAPTLSLPPAAAALRR--TDGSSPGPAPAGRAPWRPPGY--RWGKSLVSNMSGLP--------------DGESERVTAATDXXXXXXXGRQVAGVGAASAGTGWSPSAXXXXDEQGGKTEATRGVQGQQEEAQQQQLSARRMSVFRALATTAGGVATRLPLMKKSRSEDAQ---------------EQDSPDQ-AYKRNSVGEWASVEVSPPASKGANGAQGXXXXXXXXXVPWWQAGAAVLVGVGAALYRPVNRLPGLLLKDEKEXXXXXXQG----------EEGRQQGTLSLV-----DATKSPASFQLARPA-----EEGALVPPEPRPN-----PXXXXPPAAGTTSSGSRARQGVAGLVDRAATMSRRARLWTLLKRRSRARAEPLLASVDTSI----MSLTPSELLSPPVEEQETALSSSSGRGPQEPVGGGAGGVAASVGVGKGDATTTSEVSAPQAVGGAGWNLFGFFPKDKFSDYLPAGPSPVVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAWPKSAWLKGLDPRAQ-VEAAMRDALRSAFGYGLVAPTAGVPAETLEAATLAAGNAAVAEGAKQLLEGK 843          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1829.5294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZF1_ECTSI5.860e-8844.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSL4_9PHAE3.600e-7041.87PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 614..634
NoneNo IPR availableCOILSCoilCoilcoord: 754..776
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..1176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1829contigL-elsbetiae_contig1829:12852..17063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1829.5294.1mRNA_L-elsbetiae_contig1829.5294.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1829 12847..17063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1829.5294.1 ID=prot_L-elsbetiae_contig1829.5294.1|Name=mRNA_L-elsbetiae_contig1829.5294.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1176bp
MRLRGHPWLCLGAAALVPVIIQGAFVSTPRLPRSSDVVRPVQQQHHLPSR
IAVRGVAAARVYAKPTTRGPPAALNSLRLGRGGGDHSRALGGKGSKIVLH
GVGSPEDTNGNSNSNSNSNSNSSARGLIDETGDRGAAEGGEGVEGQGAGN
SGGSLIAFVGRVPVRPPRVVQPRAKSSQSRRARKADVPTTTPSGGFVEAG
ALPPPPLPPPSLAPVVTEKSDTRPWRWMQLPWQTLKEGIRDTVIPPTDLP
STTSATIMSAPLEDAGNGDAQKRYESWGISASSVPTSAAPVREPEKPVAV
QPSLGEPPPLEKQQTDEGNRVVDAVLHVIKLGWPWPHEKTSSDKTRSAQQ
QQRPGQSQLRRRQQQQQQQQQHPETVEEVNQLFETVVGMIKLGIKLGWPW
TPESSGSTASSASAAGRQQDPTPQEGTSEIFSAGGRTTAPRNQPQQQGLE
DGGNDDSGAASRGRRLTFSRVRGAIEQPLSILGKPLVRVIRAGSRAGSSA
TTTGSAVGTRLLSGNGPAPPLISLPPAAAALRQAGSERSGSSPDPDARRR
WQPPQAKRRRGKSLLPGSRHAPGVGASGSSSSSSSAQGSPERTTASGRGW
TSPTIVLDENEWDMVAAEGRKGEEEEEEEEEEEVQQPEWFSRRRLRGVLS
SVASGVARRLLLISGSKDGAAAGGRRGEPKEATPEQPAYNRNRVGEWAAV
QLSPLIPADANAARNANPGEEGGIPWWRAAAAVAVGVGAALYGPVSRLPA
LVFKGDDEEEAESEEQRRQRQQQQRRDEGWQRGALSRAVEDAAEALRLPS
ARPLASSSSSSSPEESPLEPKPKLQQLPQPQQPQQPAGETYSGLRGRRRV
ALLVDKAAMTSRRARLWTLLKRKSRARAEPLLAGVDEGISTLSMLLTPSG
LLPPLAEEEEEEAAGRSPLSPLSGGGGGGAEKDGSTAATAAAAKGSAPQA
VGGAGWNVFGFFPKDKVVDDSSALPVVLEEEEEEEEDDDDDDIDIDDGEG
ELEELGAKGVGVSAAVVSAAATAAKLASASASSSSGNDSTAVLDETEPNA
VSAWPKSALVEGLDPRAQQVEAAIREALRSAFGYGLDIPTAGVPAETLEA
ATLAAGSAAVAEGTKQLLEGKASSPTARYLDDLSPAGGGSGGGDAVASIE
AAEKGAADGLWMGGEAAAYAAGAAAG
back to top