prot_L-elsbetiae_contig18266.5285.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18266.5285.1
Unique Nameprot_L-elsbetiae_contig18266.5285.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length308
Homology
BLAST of mRNA_L-elsbetiae_contig18266.5285.1 vs. uniprot
Match: A0A6H5JM25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM25_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 4.180e-21
Identity = 104/268 (38.81%), Postives = 131/268 (48.88%), Query Frame = 0
Query:    1 MTGAQFLDLVSSCTILEGQFFWAAATRVIRRVCRAGRELKAAFAKEVLDVRG------NAQYGEGSGAESRRRHGETRSSPAASRRTDPHRPQAERGRRRPARNKGRKDSRGGASTDHSG-----AVRRMSVVMVRPPRPHGEDTLTGASAGAADADKAVATTTRGAGGNGREERQPKGSDDQPGVGKPPDEERPGRAEGPGHTEEKADGETPPTAGAATLSKEAAFLKATEDTEGGQGAMLFSEFVEALVRLCLARYGPRAASRAQG 257
            M+GAQFLD V +C +LEG+F WAA   VI RV R GR  K A + E+L   G       +   + S  E   R+   R  P+++   +P RPQ +RG + P  +KGR   R G S    G     A  +    M    R  G D      +G         TT++    N   + Q  G + Q  +GK  +  +    +G G  E   D ET       +LSKEAAFLK T DTEGGQG MLF EFVEAL RLCL RY P  A R QG
Sbjct:  312 MSGAQFLDFVDNCEVLEGRFSWAAGASVIHRVTREGRNRKTARSIEILGCPGAHGGVDTSPKTKNSDMEVSGRNTTRRCRPSSAASGNPRRPQTKRGEQAP--HKGRGGHRSGESPTKGGVAAAEASGQSGAAMGDRVRGDGSD-----KSGGXXXXXXXXTTSKSR--NNTSDCQA-GVNQQNEIGKLHEMPKKPAQDGLGGGE---DIETE------SLSKEAAFLKVTGDTEGGQGGMLFPEFVEALTRLCLKRYAPWVAPRNQG 560          
BLAST of mRNA_L-elsbetiae_contig18266.5285.1 vs. uniprot
Match: D8LDA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA4_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 6.160e-9
Identity = 51/120 (42.50%), Postives = 69/120 (57.50%), Query Frame = 0
Query:    1 MTGAQFLDLVSSCTILEGQFFWAAATRVIRRVCRAGRELKAAFAKEVLDVRG------NAQYGEGSGAESRRRHGETRSSPAASRRTDPHRPQAERGRRRPARNKGRKDSRGGASTDHSG 114
            M+GAQFLDLVS+C +LEG+F WAA   VI RV R GR  K A + E+L   G       +   E S + +  R+  TR  P+++   +P RPQ +RG++ P   KGR   R G S  +SG
Sbjct:  254 MSGAQFLDLVSNCEVLEGRFGWAAGASVIHRVTREGRNRKTARSLEILGCPGAHGGVDTSPKTENSDSAASARN--TRCRPSSAGSGNPRRPQTKRGKQAPR--KGRGGQRSGESPANSG 369          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18266.5285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JM25_9PHAE4.180e-2138.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDA4_ECTSI6.160e-942.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18266contigL-elsbetiae_contig18266:1352..2685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18266.5285.1mRNA_L-elsbetiae_contig18266.5285.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18266 922..2690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18266.5285.1 ID=prot_L-elsbetiae_contig18266.5285.1|Name=mRNA_L-elsbetiae_contig18266.5285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=308bp
MTGAQFLDLVSSCTILEGQFFWAAATRVIRRVCRAGRELKAAFAKEVLDV
RGNAQYGEGSGAESRRRHGETRSSPAASRRTDPHRPQAERGRRRPARNKG
RKDSRGGASTDHSGAVRRMSVVMVRPPRPHGEDTLTGASAGAADADKAVA
TTTRGAGGNGREERQPKGSDDQPGVGKPPDEERPGRAEGPGHTEEKADGE
TPPTAGAATLSKEAAFLKATEDTEGGQGAMLFSEFVEALVRLCLARYGPR
AASRAQGLAAARANAGRGKMFGVGGGKMTINPRASFAAKSVPRGGRNPNV
RKKVSHL*
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